RNA–Protein interactions for RNA: ENST00000601060.5

ECH1-213, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 3

Gene ECH1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-213ENST00000601060 NISCHQ9Y2I1 1504 aa33.88■■■■□ 3.01
ECH1-213ENST00000601060 ABCC9O60706 1549 aa30.29■■■□□ 2.44
ECH1-213ENST00000601060 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
ECH1-213ENST00000601060 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
ECH1-213ENST00000601060 NACADO15069 1562 aa28.6■■■□□ 2.17
ECH1-213ENST00000601060 DNAJC5BQ9UF47 199 aa28.53■■■□□ 2.16
ECH1-213ENST00000601060 ZCCHC6Q5VYS8 1495 aaKnown RBP28.39■■■□□ 2.13
ECH1-213ENST00000601060 DCAF8L2P0C7V8 631 aa28.2■■■□□ 2.1
ECH1-213ENST00000601060 UNC13AQ9UPW8 1703 aa28.2■■■□□ 2.1
ECH1-213ENST00000601060 MYO15BQ96JP2 1530 aa28.15■■■□□ 2.1
ECH1-213ENST00000601060 PABPN1Q86U42 306 aaKnown RBP eCLIP28.05■■■□□ 2.08
ECH1-213ENST00000601060 DCAF1Q9Y4B6 1507 aa28■■■□□ 2.07
ECH1-213ENST00000601060 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
ECH1-213ENST00000601060 SHROOM4Q9ULL8 1493 aa27.74■■■□□ 2.03
ECH1-213ENST00000601060 CC2D2AQ9P2K1 1620 aa27.44■■□□□ 1.98
ECH1-213ENST00000601060 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
ECH1-213ENST00000601060 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
ECH1-213ENST00000601060 EIF4G1Q04637 1599 aaKnown RBP27.32■■□□□ 1.96
ECH1-213ENST00000601060 DNAJC5Q9H3Z4 198 aa26.56■■□□□ 1.84
ECH1-213ENST00000601060 SUPT5HO00267 1087 aaKnown RBP26.47■■□□□ 1.83
ECH1-213ENST00000601060 CUX2O14529 1486 aa26.39■■□□□ 1.82
ECH1-213ENST00000601060 NCAPD3P42695 1498 aa26.34■■□□□ 1.81
ECH1-213ENST00000601060 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
ECH1-213ENST00000601060 BAZ1AQ9NRL2 1556 aaPredicted RBP26.21■■□□□ 1.79
ECH1-213ENST00000601060 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
ECH1-213ENST00000601060 RSF1Q96T23 1441 aaPredicted RBP26.19■■□□□ 1.78
ECH1-213ENST00000601060 SMARCA2P51531 1590 aa26.19■■□□□ 1.78
ECH1-213ENST00000601060 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
ECH1-213ENST00000601060 MROH2BQ7Z745 1585 aa26.15■■□□□ 1.78
ECH1-213ENST00000601060 SMARCA4P51532 1647 aa26.14■■□□□ 1.77
ECH1-213ENST00000601060 WIZO95785 1651 aa25.96■■□□□ 1.75
ECH1-213ENST00000601060 BAZ1BQ9UIG0 1483 aaKnown RBP25.95■■□□□ 1.74
ECH1-213ENST00000601060 PEG3Q9GZU2 1588 aa25.93■■□□□ 1.74
ECH1-213ENST00000601060 NESP48681 1621 aa25.91■■□□□ 1.74
ECH1-213ENST00000601060 LAMC3Q9Y6N6 1575 aa25.87■■□□□ 1.73
ECH1-213ENST00000601060 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
ECH1-213ENST00000601060 KIF21AQ7Z4S6 1674 aa25.7■■□□□ 1.7
ECH1-213ENST00000601060 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
ECH1-213ENST00000601060 PDS5BQ9NTI5 1447 aa25.68■■□□□ 1.7
ECH1-213ENST00000601060 CADPSQ9ULU8 1353 aa25.49■■□□□ 1.67
ECH1-213ENST00000601060 MRC2Q9UBG0 1479 aa25.47■■□□□ 1.67
ECH1-213ENST00000601060 WDR62O43379 1518 aa25.44■■□□□ 1.66
ECH1-213ENST00000601060 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
ECH1-213ENST00000601060 CEP164Q9UPV0 1460 aa25.32■■□□□ 1.64
ECH1-213ENST00000601060 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
ECH1-213ENST00000601060 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
ECH1-213ENST00000601060 CHIC1Q5VXU3 224 aa25.17■■□□□ 1.62
ECH1-213ENST00000601060 CFTRP13569 1480 aa25.15■■□□□ 1.62
ECH1-213ENST00000601060 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
ECH1-213ENST00000601060 OSCARQ8IYS5 282 aa25.01■■□□□ 1.59
ECH1-213ENST00000601060 URB2Q14146 1524 aaKnown RBP24.99■■□□□ 1.59
ECH1-213ENST00000601060 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
ECH1-213ENST00000601060 ABCC8Q09428 1581 aa24.81■■□□□ 1.56
ECH1-213ENST00000601060 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
ECH1-213ENST00000601060 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
ECH1-213ENST00000601060 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
ECH1-213ENST00000601060 WRNQ14191 1432 aaPredicted RBP eCLIP24.71■■□□□ 1.55
ECH1-213ENST00000601060 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
ECH1-213ENST00000601060 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
ECH1-213ENST00000601060 EIF4G3O43432 1585 aaKnown RBP24.67■■□□□ 1.54
ECH1-213ENST00000601060 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
ECH1-213ENST00000601060 DNMBPQ6XZF7 1577 aa24.65■■□□□ 1.54
ECH1-213ENST00000601060 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
ECH1-213ENST00000601060 CHD1O14646 1710 aa24.55■■□□□ 1.52
ECH1-213ENST00000601060 TARBP1Q13395 1621 aaKnown RBP24.53■■□□□ 1.52
ECH1-213ENST00000601060 TOP2BQ02880 1626 aa24.51■■□□□ 1.51
ECH1-213ENST00000601060 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
ECH1-213ENST00000601060 CUX1P39880 1505 aa24.47■■□□□ 1.51
ECH1-213ENST00000601060 FAM9AQ8IZU1 332 aaPredicted RBP24.46■■□□□ 1.51
ECH1-213ENST00000601060 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
ECH1-213ENST00000601060 AQRO60306 1485 aaKnown RBP eCLIP24.42■■□□□ 1.57e-9■■■■■ 30.5
ECH1-213ENST00000601060 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
ECH1-213ENST00000601060 CYB5RLQ6IPT4 315 aa24.37■■□□□ 1.49
ECH1-213ENST00000601060 ARAP1Q96P48 1450 aa24.37■■□□□ 1.49
ECH1-213ENST00000601060 SOGA1O94964 1423 aa24.3■■□□□ 1.48
ECH1-213ENST00000601060 EEA1Q15075 1411 aa24.3■■□□□ 1.48
ECH1-213ENST00000601060 FBLN2P98095 1184 aa24.3■■□□□ 1.48
ECH1-213ENST00000601060 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
ECH1-213ENST00000601060 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
ECH1-213ENST00000601060 SNAPC4Q5SXM2 1469 aa24.25■■□□□ 1.47
ECH1-213ENST00000601060 MAGI1Q96QZ7 1491 aaPredicted RBP24.25■■□□□ 1.47
ECH1-213ENST00000601060 CLASP1Q7Z460 1538 aa24.25■■□□□ 1.47
ECH1-213ENST00000601060 TRHP20396 242 aaPredicted RBP24.23■■□□□ 1.47
ECH1-213ENST00000601060 LOC105371045A0A1W2PR82 267 aa24.21■■□□□ 1.47
ECH1-213ENST00000601060 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.47
ECH1-213ENST00000601060 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.46
ECH1-213ENST00000601060 CSRNP3Q8WYN3 585 aa24.19■■□□□ 1.46
ECH1-213ENST00000601060 GRIN2BQ13224 1484 aa24.17■■□□□ 1.46
ECH1-213ENST00000601060 SYNJ2O15056 1496 aa24.13■■□□□ 1.45
ECH1-213ENST00000601060 KIF27Q86VH2 1401 aa24.13■■□□□ 1.45
ECH1-213ENST00000601060 CHMP7Q8WUX9 453 aaPredicted RBP24.13■■□□□ 1.45
ECH1-213ENST00000601060 EHMT2Q96KQ7 1210 aa24.13■■□□□ 1.45
ECH1-213ENST00000601060 PBRM1Q86U86 1689 aa24.12■■□□□ 1.45
ECH1-213ENST00000601060 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
ECH1-213ENST00000601060 GAPVD1Q14C86 1478 aa24.01■■□□□ 1.43
ECH1-213ENST00000601060 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
ECH1-213ENST00000601060 KIF21BO75037 1637 aa23.95■■□□□ 1.43
ECH1-213ENST00000601060 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
ECH1-213ENST00000601060 UBTFP17480 764 aaKnown RBP23.93■■□□□ 1.42
ECH1-213ENST00000601060 IGF1RP08069 1367 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms