RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
SOX2-OT-233ENST00000600778 CCDC180Q9P1Z9 1646 aa25.52■■□□□ 1.68
SOX2-OT-233ENST00000600778 ABCC9O60706 1549 aa25.4■■□□□ 1.66
SOX2-OT-233ENST00000600778 RB1CC1Q8TDY2 1594 aa24.23■■□□□ 1.47
SOX2-OT-233ENST00000600778 DCAF8L2P0C7V8 631 aa24.17■■□□□ 1.46
SOX2-OT-233ENST00000600778 NACADO15069 1562 aa24.1■■□□□ 1.45
SOX2-OT-233ENST00000600778 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
SOX2-OT-233ENST00000600778 ZCCHC6Q5VYS8 1495 aaKnown RBP23.73■■□□□ 1.39
SOX2-OT-233ENST00000600778 PABPN1Q86U42 306 aaKnown RBP eCLIP23.72■■□□□ 1.39
SOX2-OT-233ENST00000600778 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
SOX2-OT-233ENST00000600778 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
SOX2-OT-233ENST00000600778 DCAF1Q9Y4B6 1507 aa23.59■■□□□ 1.37
SOX2-OT-233ENST00000600778 BICRAQ9NZM4 1560 aa23.51■■□□□ 1.35
SOX2-OT-233ENST00000600778 SCRIBQ14160 1630 aa23.33■■□□□ 1.32
SOX2-OT-233ENST00000600778 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
SOX2-OT-233ENST00000600778 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
SOX2-OT-233ENST00000600778 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
SOX2-OT-233ENST00000600778 CECR2Q9BXF3 1484 aa22.84■■□□□ 1.25
SOX2-OT-233ENST00000600778 SMARCA4P51532 1647 aa22.26■■□□□ 1.15
SOX2-OT-233ENST00000600778 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
SOX2-OT-233ENST00000600778 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
SOX2-OT-233ENST00000600778 BAZ1AQ9NRL2 1556 aaPredicted RBP22.17■■□□□ 1.14
SOX2-OT-233ENST00000600778 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
SOX2-OT-233ENST00000600778 HMGXB3Q12766 1538 aa22.09■■□□□ 1.13
SOX2-OT-233ENST00000600778 MROH2BQ7Z745 1585 aa22.05■■□□□ 1.12
SOX2-OT-233ENST00000600778 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
SOX2-OT-233ENST00000600778 PEG3Q9GZU2 1588 aa22.01■■□□□ 1.11
SOX2-OT-233ENST00000600778 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
SOX2-OT-233ENST00000600778 NESP48681 1621 aa21.88■■□□□ 1.09
SOX2-OT-233ENST00000600778 WIZO95785 1651 aa21.8■■□□□ 1.08
SOX2-OT-233ENST00000600778 CUX2O14529 1486 aa21.76■■□□□ 1.07
SOX2-OT-233ENST00000600778 LAMC3Q9Y6N6 1575 aa21.72■■□□□ 1.07
SOX2-OT-233ENST00000600778 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
SOX2-OT-233ENST00000600778 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
SOX2-OT-233ENST00000600778 PDS5BQ9NTI5 1447 aa21.62■■□□□ 1.05
SOX2-OT-233ENST00000600778 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
SOX2-OT-233ENST00000600778 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
SOX2-OT-233ENST00000600778 DNAJC5Q9H3Z4 198 aa21.55■■□□□ 1.04
SOX2-OT-233ENST00000600778 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
SOX2-OT-233ENST00000600778 AEBP2Q6ZN18 517 aaPredicted RBP21.49■■□□□ 1.03
SOX2-OT-233ENST00000600778 MRC2Q9UBG0 1479 aa21.4■■□□□ 1.02
SOX2-OT-233ENST00000600778 CFTRP13569 1480 aa21.39■■□□□ 1.02
SOX2-OT-233ENST00000600778 FANCD2Q9BXW9 1451 aa21.37■■□□□ 1.01
SOX2-OT-233ENST00000600778 CEP164Q9UPV0 1460 aa21.37■■□□□ 1.01
SOX2-OT-233ENST00000600778 WDR62O43379 1518 aa21.32■■□□□ 1
SOX2-OT-233ENST00000600778 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
SOX2-OT-233ENST00000600778 URB2Q14146 1524 aaKnown RBP21.17■□□□□ 0.98
SOX2-OT-233ENST00000600778 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
SOX2-OT-233ENST00000600778 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
SOX2-OT-233ENST00000600778 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.94
SOX2-OT-233ENST00000600778 ABCC8Q09428 1581 aa20.94■□□□□ 0.94
SOX2-OT-233ENST00000600778 IFT140Q96RY7 1462 aa20.93■□□□□ 0.94
SOX2-OT-233ENST00000600778 DNMBPQ6XZF7 1577 aa20.91■□□□□ 0.94
SOX2-OT-233ENST00000600778 ZNF608Q9ULD9 1512 aaPredicted RBP20.88■□□□□ 0.93
SOX2-OT-233ENST00000600778 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
SOX2-OT-233ENST00000600778 POLA1P09884 1462 aaPredicted RBP20.78■□□□□ 0.92
SOX2-OT-233ENST00000600778 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
SOX2-OT-233ENST00000600778 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
SOX2-OT-233ENST00000600778 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
SOX2-OT-233ENST00000600778 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.91
SOX2-OT-233ENST00000600778 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
SOX2-OT-233ENST00000600778 SOGA1O94964 1423 aa20.72■□□□□ 0.91
SOX2-OT-233ENST00000600778 CUX1P39880 1505 aa20.7■□□□□ 0.9
SOX2-OT-233ENST00000600778 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
SOX2-OT-233ENST00000600778 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
SOX2-OT-233ENST00000600778 TDRD9Q8NDG6 1382 aaKnown RBP20.66■□□□□ 0.9
SOX2-OT-233ENST00000600778 FBLN2P98095 1184 aa20.61■□□□□ 0.89
SOX2-OT-233ENST00000600778 CHD1O14646 1710 aa20.57■□□□□ 0.88
SOX2-OT-233ENST00000600778 WDR97A6NE52 1622 aa20.54■□□□□ 0.88
SOX2-OT-233ENST00000600778 RIMBP3CA6NJZ7 1639 aa20.53■□□□□ 0.88
SOX2-OT-233ENST00000600778 RIMBP3BA6NNM3 1639 aa20.53■□□□□ 0.88
SOX2-OT-233ENST00000600778 RIMBP3Q9UFD9 1639 aa20.53■□□□□ 0.88
SOX2-OT-233ENST00000600778 SNAPC4Q5SXM2 1469 aa20.52■□□□□ 0.88
SOX2-OT-233ENST00000600778 GRIN2BQ13224 1484 aa20.49■□□□□ 0.87
SOX2-OT-233ENST00000600778 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
SOX2-OT-233ENST00000600778 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
SOX2-OT-233ENST00000600778 GAPVD1Q14C86 1478 aa20.45■□□□□ 0.86
SOX2-OT-233ENST00000600778 MAGI1Q96QZ7 1491 aaPredicted RBP20.45■□□□□ 0.86
SOX2-OT-233ENST00000600778 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.86
SOX2-OT-233ENST00000600778 ABCA10Q8WWZ4 1543 aa20.44■□□□□ 0.86
SOX2-OT-233ENST00000600778 TOP2BQ02880 1626 aa20.42■□□□□ 0.86
SOX2-OT-233ENST00000600778 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
SOX2-OT-233ENST00000600778 BIVM-ERCC5R4GMW8 1640 aa20.41■□□□□ 0.86
SOX2-OT-233ENST00000600778 SYNJ1O43426 1573 aa20.4■□□□□ 0.86
SOX2-OT-233ENST00000600778 SYNJ2O15056 1496 aa20.39■□□□□ 0.85
SOX2-OT-233ENST00000600778 ABCA5Q8WWZ7 1642 aa20.38■□□□□ 0.85
SOX2-OT-233ENST00000600778 CYB5RLQ6IPT4 315 aa20.38■□□□□ 0.85
SOX2-OT-233ENST00000600778 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
SOX2-OT-233ENST00000600778 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
SOX2-OT-233ENST00000600778 GRIN2AQ12879 1464 aa20.23■□□□□ 0.83
SOX2-OT-233ENST00000600778 ADAMTS12P58397 1594 aa20.22■□□□□ 0.83
SOX2-OT-233ENST00000600778 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
SOX2-OT-233ENST00000600778 ERICH3Q5RHP9 1530 aa20.19■□□□□ 0.82
SOX2-OT-233ENST00000600778 CEP170Q5SW79 1584 aa20.14■□□□□ 0.81
SOX2-OT-233ENST00000600778 NUP160Q12769 1436 aa20.13■□□□□ 0.81
SOX2-OT-233ENST00000600778 TRHP20396 242 aaPredicted RBP20.11■□□□□ 0.81
SOX2-OT-233ENST00000600778 ERCC6L2Q5T890 1561 aa20.06■□□□□ 0.8
SOX2-OT-233ENST00000600778 KIF27Q86VH2 1401 aa20.04■□□□□ 0.8
SOX2-OT-233ENST00000600778 IGF1RP08069 1367 aa20.02■□□□□ 0.8
SOX2-OT-233ENST00000600778 SHROOM2Q13796 1616 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms