RNA–Protein interactions for RNA: ENST00000600199.1

AP2A1-206, Transcript of adaptor related protein complex 2 subunit alpha 1, humanhuman

TSL 5

Gene AP2A1, Length 2,381 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP2A1-206ENST00000600199 NISCHQ9Y2I1 1504 aa34.14■■■■□ 3.06
AP2A1-206ENST00000600199 CCDC180Q9P1Z9 1646 aa29.54■■■□□ 2.32
AP2A1-206ENST00000600199 ZCCHC6Q5VYS8 1495 aaKnown RBP28.75■■■□□ 2.19
AP2A1-206ENST00000600199 SHROOM4Q9ULL8 1493 aa28.28■■■□□ 2.12
AP2A1-206ENST00000600199 DCAF8L2P0C7V8 631 aa28.24■■■□□ 2.11
AP2A1-206ENST00000600199 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
AP2A1-206ENST00000600199 ABCC9O60706 1549 aa27.78■■■□□ 2.04
AP2A1-206ENST00000600199 MYO15BQ96JP2 1530 aa27.64■■■□□ 2.02
AP2A1-206ENST00000600199 NACADO15069 1562 aa27.43■■□□□ 1.98
AP2A1-206ENST00000600199 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
AP2A1-206ENST00000600199 SUPT5HO00267 1087 aaKnown RBP27.36■■□□□ 1.97
AP2A1-206ENST00000600199 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.94
AP2A1-206ENST00000600199 UNC13AQ9UPW8 1703 aa26.7■■□□□ 1.86
AP2A1-206ENST00000600199 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
AP2A1-206ENST00000600199 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
AP2A1-206ENST00000600199 MROH2BQ7Z745 1585 aa26.44■■□□□ 1.82
AP2A1-206ENST00000600199 BICRAQ9NZM4 1560 aa26.38■■□□□ 1.81
AP2A1-206ENST00000600199 BAZ1AQ9NRL2 1556 aaPredicted RBP26.32■■□□□ 1.8
AP2A1-206ENST00000600199 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
AP2A1-206ENST00000600199 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
AP2A1-206ENST00000600199 WIZO95785 1651 aa26.26■■□□□ 1.79
AP2A1-206ENST00000600199 SMARCA4P51532 1647 aa26.18■■□□□ 1.78
AP2A1-206ENST00000600199 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
AP2A1-206ENST00000600199 PEG3Q9GZU2 1588 aa25.79■■□□□ 1.72
AP2A1-206ENST00000600199 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
AP2A1-206ENST00000600199 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
AP2A1-206ENST00000600199 ATAD2BQ9ULI0 1458 aa25.67■■□□□ 1.7
AP2A1-206ENST00000600199 EIF4G1Q04637 1599 aaKnown RBP25.65■■□□□ 1.7
AP2A1-206ENST00000600199 TRIM41Q8WV44 630 aa25.62■■□□□ 1.69
AP2A1-206ENST00000600199 BAZ1BQ9UIG0 1483 aaKnown RBP25.56■■□□□ 1.68
AP2A1-206ENST00000600199 LOC105371045A0A1W2PR82 267 aa25.38■■□□□ 1.65
AP2A1-206ENST00000600199 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
AP2A1-206ENST00000600199 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
AP2A1-206ENST00000600199 HMGXB3Q12766 1538 aa25.33■■□□□ 1.65
AP2A1-206ENST00000600199 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
AP2A1-206ENST00000600199 CC2D2AQ9P2K1 1620 aa25.1■■□□□ 1.61
AP2A1-206ENST00000600199 WRNQ14191 1432 aaPredicted RBP eCLIP25.07■■□□□ 1.6
AP2A1-206ENST00000600199 SYNJ1O43426 1573 aa24.99■■□□□ 1.59
AP2A1-206ENST00000600199 EHMT2Q96KQ7 1210 aa24.98■■□□□ 1.59
AP2A1-206ENST00000600199 SOGA1O94964 1423 aa24.93■■□□□ 1.58
AP2A1-206ENST00000600199 CFTRP13569 1480 aa24.9■■□□□ 1.58
AP2A1-206ENST00000600199 RUSC2Q8N2Y8 1516 aa24.83■■□□□ 1.57
AP2A1-206ENST00000600199 EEA1Q15075 1411 aa24.81■■□□□ 1.56
AP2A1-206ENST00000600199 TOP2BQ02880 1626 aa24.81■■□□□ 1.56
AP2A1-206ENST00000600199 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
AP2A1-206ENST00000600199 BIVM-ERCC5R4GMW8 1640 aa24.76■■□□□ 1.55
AP2A1-206ENST00000600199 CADPSQ9ULU8 1353 aa24.75■■□□□ 1.55
AP2A1-206ENST00000600199 CSRNP3Q8WYN3 585 aa24.72■■□□□ 1.55
AP2A1-206ENST00000600199 CUX1P39880 1505 aa24.69■■□□□ 1.54
AP2A1-206ENST00000600199 PCGF6Q9BYE7 350 aa24.59■■□□□ 1.53
AP2A1-206ENST00000600199 GOLGA3Q08378 1498 aa24.56■■□□□ 1.52
AP2A1-206ENST00000600199 TNIKQ9UKE5 1360 aa24.53■■□□□ 1.52
AP2A1-206ENST00000600199 KIF21BO75037 1637 aa24.52■■□□□ 1.52
AP2A1-206ENST00000600199 CEP164Q9UPV0 1460 aa24.52■■□□□ 1.52
AP2A1-206ENST00000600199 NESP48681 1621 aa24.51■■□□□ 1.51
AP2A1-206ENST00000600199 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
AP2A1-206ENST00000600199 UBTFP17480 764 aaKnown RBP24.5■■□□□ 1.51
AP2A1-206ENST00000600199 CEP162Q5TB80 1403 aa24.49■■□□□ 1.51
AP2A1-206ENST00000600199 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
AP2A1-206ENST00000600199 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
AP2A1-206ENST00000600199 RAPGEF2Q9Y4G8 1499 aa24.4■■□□□ 1.5
AP2A1-206ENST00000600199 TRIM26Q12899 539 aaPredicted RBP24.4■■□□□ 1.5
AP2A1-206ENST00000600199 KIF27Q86VH2 1401 aa24.39■■□□□ 1.49
AP2A1-206ENST00000600199 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
AP2A1-206ENST00000600199 DNMBPQ6XZF7 1577 aa24.32■■□□□ 1.48
AP2A1-206ENST00000600199 PRXQ9BXM0 1461 aa24.31■■□□□ 1.48
AP2A1-206ENST00000600199 CUX2O14529 1486 aa24.29■■□□□ 1.48
AP2A1-206ENST00000600199 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
AP2A1-206ENST00000600199 TOPBP1Q92547 1522 aa24.28■■□□□ 1.48
AP2A1-206ENST00000600199 PDS5BQ9NTI5 1447 aa24.23■■□□□ 1.47
AP2A1-206ENST00000600199 PPARGC1BQ86YN6 1023 aaKnown RBP24.23■■□□□ 1.47
AP2A1-206ENST00000600199 POLA1P09884 1462 aaPredicted RBP24.2■■□□□ 1.47
AP2A1-206ENST00000600199 CLIP1P30622 1438 aa24.2■■□□□ 1.47
AP2A1-206ENST00000600199 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
AP2A1-206ENST00000600199 KIF21AQ7Z4S6 1674 aa24.19■■□□□ 1.46
AP2A1-206ENST00000600199 RAD54L2Q9Y4B4 1467 aa24.16■■□□□ 1.46
AP2A1-206ENST00000600199 IGF1RP08069 1367 aa24.15■■□□□ 1.46
AP2A1-206ENST00000600199 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
AP2A1-206ENST00000600199 RANGAP1P46060 587 aaPredicted RBP24.1■■□□□ 1.45
AP2A1-206ENST00000600199 HRCP23327 699 aa24.1■■□□□ 1.45
AP2A1-206ENST00000600199 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
AP2A1-206ENST00000600199 VPS8Q8N3P4 1428 aa24.03■■□□□ 1.44
AP2A1-206ENST00000600199 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
AP2A1-206ENST00000600199 TTBK1Q5TCY1 1321 aaPredicted RBP24■■□□□ 1.43
AP2A1-206ENST00000600199 ARAP1Q96P48 1450 aa23.93■■□□□ 1.42
AP2A1-206ENST00000600199 MRC2Q9UBG0 1479 aa23.91■■□□□ 1.42
AP2A1-206ENST00000600199 ABCA5Q8WWZ7 1642 aa23.91■■□□□ 1.42
AP2A1-206ENST00000600199 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
AP2A1-206ENST00000600199 CUL7Q14999 1698 aa23.89■■□□□ 1.42
AP2A1-206ENST00000600199 TARBP1Q13395 1621 aaKnown RBP23.87■■□□□ 1.41
AP2A1-206ENST00000600199 ARHGAP35Q9NRY4 1499 aa23.86■■□□□ 1.41
AP2A1-206ENST00000600199 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
AP2A1-206ENST00000600199 APLP2Q06481 763 aa23.8■■□□□ 1.4
AP2A1-206ENST00000600199 WDR62O43379 1518 aa23.77■■□□□ 1.4
AP2A1-206ENST00000600199 ERCC6Q03468 1493 aa23.75■■□□□ 1.39
AP2A1-206ENST00000600199 CTTNBP2Q8WZ74 1663 aa23.72■■□□□ 1.39
AP2A1-206ENST00000600199 PBRM1Q86U86 1689 aa23.7■■□□□ 1.38
AP2A1-206ENST00000600199 AQRO60306 1485 aaKnown RBP eCLIP23.69■■□□□ 1.381e-6■■■□□ 15.3
AP2A1-206ENST00000600199 IFT140Q96RY7 1462 aa23.66■■□□□ 1.38
AP2A1-206ENST00000600199 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms