RNA–Protein interactions for RNA: ENST00000599811.5

CD22-223, Transcript of CD22 molecule, human

TSL 4

Gene CD22, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD22-223	ENST00000599811	NISCH	Q9Y2I1	1504 aa		15.38	■□□□□ 0.05
CD22-223	ENST00000599811	AEBP2	Q6ZN18	517 aa	Predicted RBP	14.82	□□□□□ -0.04
CD22-223	ENST00000599811	CHIC1	Q5VXU3	224 aa		14.69	□□□□□ -0.06
CD22-223	ENST00000599811	ABCC9	O60706	1549 aa		14.5	□□□□□ -0.09
CD22-223	ENST00000599811	CCDC180	Q9P1Z9	1646 aa		14.03	□□□□□ -0.16
CD22-223	ENST00000599811	DNAJC5B	Q9UF47	199 aa		13.93	□□□□□ -0.18
CD22-223	ENST00000599811	RB1CC1	Q8TDY2	1594 aa		13.59	□□□□□ -0.23
CD22-223	ENST00000599811	PABPN1	Q86U42	306 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
CD22-223	ENST00000599811	NACAD	O15069	1562 aa		13.36	□□□□□ -0.27
CD22-223	ENST00000599811	DCAF8L2	P0C7V8	631 aa		13.32	□□□□□ -0.28
CD22-223	ENST00000599811	UNC13A	Q9UPW8	1703 aa		13.31	□□□□□ -0.28
CD22-223	ENST00000599811	BICRA	Q9NZM4	1560 aa		13.15	□□□□□ -0.3
CD22-223	ENST00000599811	DNAJC5	Q9H3Z4	198 aa		13.14	□□□□□ -0.31
CD22-223	ENST00000599811	CECR2	Q9BXF3	1484 aa		13.1	□□□□□ -0.31
CD22-223	ENST00000599811	CC2D2A	Q9P2K1	1620 aa		13.06	□□□□□ -0.32
CD22-223	ENST00000599811	PHF23	Q9BUL5	403 aa	Predicted RBP	13	□□□□□ -0.33
CD22-223	ENST00000599811	MYO15B	Q96JP2	1530 aa		12.96	□□□□□ -0.33
CD22-223	ENST00000599811	SHROOM4	Q9ULL8	1493 aa		12.92	□□□□□ -0.34
CD22-223	ENST00000599811	EIF4G1	Q04637	1599 aa	Known RBP	12.9	□□□□□ -0.34
CD22-223	ENST00000599811	SCRIB	Q14160	1630 aa		12.8	□□□□□ -0.36
CD22-223	ENST00000599811	CUX2	O14529	1486 aa		12.65	□□□□□ -0.38
CD22-223	ENST00000599811	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.65	□□□□□ -0.38
CD22-223	ENST00000599811	DCAF1	Q9Y4B6	1507 aa		12.63	□□□□□ -0.39
CD22-223	ENST00000599811	ERCC6	Q03468	1493 aa		12.59	□□□□□ -0.39
CD22-223	ENST00000599811	TRIM41	Q8WV44	630 aa		12.5	□□□□□ -0.41
CD22-223	ENST00000599811	SENP3	Q9H4L4	574 aa	Predicted RBP	12.44	□□□□□ -0.42
CD22-223	ENST00000599811	NES	P48681	1621 aa		12.3	□□□□□ -0.44
CD22-223	ENST00000599811	NCAPD3	P42695	1498 aa		12.29	□□□□□ -0.44
CD22-223	ENST00000599811	THOC2	Q8NI27	1593 aa	Known RBP	12.26	□□□□□ -0.45
CD22-223	ENST00000599811	SMARCA2	P51531	1590 aa		12.22	□□□□□ -0.45
CD22-223	ENST00000599811	ATAD2B	Q9ULI0	1458 aa		12.22	□□□□□ -0.45
CD22-223	ENST00000599811	HMGXB3	Q12766	1538 aa		12.2	□□□□□ -0.46
CD22-223	ENST00000599811	KIF21A	Q7Z4S6	1674 aa		12.18	□□□□□ -0.46
CD22-223	ENST00000599811	LAMC3	Q9Y6N6	1575 aa		12.14	□□□□□ -0.47
CD22-223	ENST00000599811	SMARCA4	P51532	1647 aa		12.13	□□□□□ -0.47
CD22-223	ENST00000599811	BAZ1B	Q9UIG0	1483 aa	Known RBP	12.13	□□□□□ -0.47
CD22-223	ENST00000599811	PDS5B	Q9NTI5	1447 aa		12.11	□□□□□ -0.47
CD22-223	ENST00000599811	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.08	□□□□□ -0.48
CD22-223	ENST00000599811	OSCAR	Q8IYS5	282 aa		12.02	□□□□□ -0.49
CD22-223	ENST00000599811	MRC2	Q9UBG0	1479 aa		12.02	□□□□□ -0.49
CD22-223	ENST00000599811	PLPPR3	Q6T4P5	718 aa		12.01	□□□□□ -0.49
CD22-223	ENST00000599811	WDR62	O43379	1518 aa		11.98	□□□□□ -0.49
CD22-223	ENST00000599811	PEG3	Q9GZU2	1588 aa		11.96	□□□□□ -0.5
CD22-223	ENST00000599811	CADPS	Q9ULU8	1353 aa		11.93	□□□□□ -0.5
CD22-223	ENST00000599811	RIMBP3C	A6NJZ7	1639 aa		11.93	□□□□□ -0.5
CD22-223	ENST00000599811	RIMBP3B	A6NNM3	1639 aa		11.93	□□□□□ -0.5
CD22-223	ENST00000599811	RIMBP3	Q9UFD9	1639 aa		11.93	□□□□□ -0.5
CD22-223	ENST00000599811	CEP164	Q9UPV0	1460 aa		11.89	□□□□□ -0.51
CD22-223	ENST00000599811	TRH	P20396	242 aa	Predicted RBP	11.88	□□□□□ -0.51
CD22-223	ENST00000599811	MROH2B	Q7Z745	1585 aa		11.85	□□□□□ -0.51
CD22-223	ENST00000599811	FANCD2	Q9BXW9	1451 aa		11.83	□□□□□ -0.52
CD22-223	ENST00000599811	ARHGEF11	O15085	1522 aa		11.82	□□□□□ -0.52
CD22-223	ENST00000599811	CYB5RL	Q6IPT4	315 aa		11.8	□□□□□ -0.52
CD22-223	ENST00000599811	URB2	Q14146	1524 aa	Known RBP	11.74	□□□□□ -0.53
CD22-223	ENST00000599811	WIZ	O95785	1651 aa		11.73	□□□□□ -0.53
CD22-223	ENST00000599811	CFTR	P13569	1480 aa		11.69	□□□□□ -0.54
CD22-223	ENST00000599811	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.68	□□□□□ -0.54
CD22-223	ENST00000599811	ARAP1	Q96P48	1450 aa		11.66	□□□□□ -0.54
CD22-223	ENST00000599811	CHD1	O14646	1710 aa		11.66	□□□□□ -0.54
CD22-223	ENST00000599811	IFT140	Q96RY7	1462 aa		11.65	□□□□□ -0.54
CD22-223	ENST00000599811	PRDM2	Q13029	1718 aa		11.63	□□□□□ -0.55
CD22-223	ENST00000599811	FBLN2	P98095	1184 aa		11.63	□□□□□ -0.55
CD22-223	ENST00000599811	EIF4G3	O43432	1585 aa	Known RBP	11.62	□□□□□ -0.55
CD22-223	ENST00000599811	RSF1	Q96T23	1441 aa	Predicted RBP	11.58	□□□□□ -0.56
CD22-223	ENST00000599811	FOXD1	Q16676	465 aa		11.56	□□□□□ -0.56
CD22-223	ENST00000599811	TOPBP1	Q92547	1522 aa		11.55	□□□□□ -0.56
CD22-223	ENST00000599811	AQR	O60306	1485 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
CD22-223	ENST00000599811	TOP2A	P11388	1531 aa	Known RBP	11.52	□□□□□ -0.57
CD22-223	ENST00000599811	ABCC8	Q09428	1581 aa		11.49	□□□□□ -0.57
CD22-223	ENST00000599811	DNMBP	Q6XZF7	1577 aa		11.47	□□□□□ -0.57
CD22-223	ENST00000599811	TARBP1	Q13395	1621 aa	Known RBP	11.46	□□□□□ -0.58
CD22-223	ENST00000599811	SYNJ1	O43426	1573 aa		11.44	□□□□□ -0.58
CD22-223	ENST00000599811	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.43	□□□□□ -0.58
CD22-223	ENST00000599811	CLASP1	Q7Z460	1538 aa		11.43	□□□□□ -0.58
CD22-223	ENST00000599811	SNAPC4	Q5SXM2	1469 aa		11.41	□□□□□ -0.58
CD22-223	ENST00000599811	CCDC88B	A6NC98	1476 aa		11.39	□□□□□ -0.59
CD22-223	ENST00000599811	POLA1	P09884	1462 aa	Predicted RBP	11.39	□□□□□ -0.59
CD22-223	ENST00000599811	TDRD9	Q8NDG6	1382 aa	Known RBP	11.39	□□□□□ -0.59
CD22-223	ENST00000599811	GAPVD1	Q14C86	1478 aa		11.38	□□□□□ -0.59
CD22-223	ENST00000599811	RAD54L2	Q9Y4B4	1467 aa		11.38	□□□□□ -0.59
CD22-223	ENST00000599811	PPP6R1	Q9UPN7	881 aa		11.37	□□□□□ -0.59
CD22-223	ENST00000599811	ILDR1	Q86SU0	546 aa	Predicted RBP	11.36	□□□□□ -0.59
CD22-223	ENST00000599811	SOGA1	O94964	1423 aa		11.35	□□□□□ -0.59
CD22-223	ENST00000599811	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.34	□□□□□ -0.59
CD22-223	ENST00000599811	ADRA2B	P18089	450 aa		11.33	□□□□□ -0.6
CD22-223	ENST00000599811	WDR97	A6NE52	1622 aa		11.31	□□□□□ -0.6
CD22-223	ENST00000599811	SYNJ2	O15056	1496 aa		11.31	□□□□□ -0.6
CD22-223	ENST00000599811	GRIN2B	Q13224	1484 aa		11.3	□□□□□ -0.6
CD22-223	ENST00000599811	KIF13A	Q9H1H9	1805 aa		11.28	□□□□□ -0.6
CD22-223	ENST00000599811	PBRM1	Q86U86	1689 aa		11.27	□□□□□ -0.6
CD22-223	ENST00000599811	FGD5	Q6ZNL6	1462 aa		11.27	□□□□□ -0.6
CD22-223	ENST00000599811	ERCC6L2	Q5T890	1561 aa		11.24	□□□□□ -0.61
CD22-223	ENST00000599811	KDM4F	A0A1W2PPD8	638 aa		11.18	□□□□□ -0.62
CD22-223	ENST00000599811	FAM69C	Q0P6D2	419 aa		11.18	□□□□□ -0.62
CD22-223	ENST00000599811	CEP170	Q5SW79	1584 aa		11.18	□□□□□ -0.62
CD22-223	ENST00000599811	CUX1	P39880	1505 aa		11.17	□□□□□ -0.62
CD22-223	ENST00000599811	TSPOAP1	O95153	1857 aa		11.16	□□□□□ -0.62
CD22-223	ENST00000599811	KDM6B	O15054	1643 aa		11.16	□□□□□ -0.62
CD22-223	ENST00000599811	GRIN2A	Q12879	1464 aa		11.15	□□□□□ -0.62
CD22-223	ENST00000599811	NPM1	P06748	294 aa	Known RBP eCLIP	11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms