RNA–Protein interactions for RNA: ENST00000599389.1

CEACAM1-213, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CEACAM1, Length 1,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-213ENST00000599389 NISCHQ9Y2I1 1504 aa18.74■□□□□ 0.59
CEACAM1-213ENST00000599389 ABCC9O60706 1549 aa17.5■□□□□ 0.39
CEACAM1-213ENST00000599389 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
CEACAM1-213ENST00000599389 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
CEACAM1-213ENST00000599389 RB1CC1Q8TDY2 1594 aa16.48■□□□□ 0.23
CEACAM1-213ENST00000599389 AEBP2Q6ZN18 517 aaPredicted RBP16.37■□□□□ 0.21
CEACAM1-213ENST00000599389 NACADO15069 1562 aa16.27■□□□□ 0.19
CEACAM1-213ENST00000599389 UNC13AQ9UPW8 1703 aa16.2■□□□□ 0.18
CEACAM1-213ENST00000599389 PABPN1Q86U42 306 aaKnown RBP eCLIP16.12■□□□□ 0.17
CEACAM1-213ENST00000599389 BICRAQ9NZM4 1560 aa16.1■□□□□ 0.17
CEACAM1-213ENST00000599389 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
CEACAM1-213ENST00000599389 DNAJC5Q9H3Z4 198 aa15.9■□□□□ 0.14
CEACAM1-213ENST00000599389 CC2D2AQ9P2K1 1620 aa15.85■□□□□ 0.13
CEACAM1-213ENST00000599389 SHROOM4Q9ULL8 1493 aa15.85■□□□□ 0.13
CEACAM1-213ENST00000599389 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
CEACAM1-213ENST00000599389 DCAF8L2P0C7V8 631 aa15.74■□□□□ 0.11
CEACAM1-213ENST00000599389 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
CEACAM1-213ENST00000599389 DCAF1Q9Y4B6 1507 aa15.52■□□□□ 0.07
CEACAM1-213ENST00000599389 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
CEACAM1-213ENST00000599389 SCRIBQ14160 1630 aa15.47■□□□□ 0.07
CEACAM1-213ENST00000599389 ZCCHC6Q5VYS8 1495 aaKnown RBP15.45■□□□□ 0.06
CEACAM1-213ENST00000599389 CUX2O14529 1486 aa15.38■□□□□ 0.05
CEACAM1-213ENST00000599389 ERCC6Q03468 1493 aa15.11■□□□□ 0.01
CEACAM1-213ENST00000599389 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
CEACAM1-213ENST00000599389 THOC2Q8NI27 1593 aaKnown RBP14.96□□□□□ -0.01
CEACAM1-213ENST00000599389 NESP48681 1621 aa14.91□□□□□ -0.02
CEACAM1-213ENST00000599389 HMGXB3Q12766 1538 aa14.9□□□□□ -0.02
CEACAM1-213ENST00000599389 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
CEACAM1-213ENST00000599389 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
CEACAM1-213ENST00000599389 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
CEACAM1-213ENST00000599389 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.05
CEACAM1-213ENST00000599389 SMARCA4P51532 1647 aa14.76□□□□□ -0.05
CEACAM1-213ENST00000599389 KIF21AQ7Z4S6 1674 aa14.76□□□□□ -0.05
CEACAM1-213ENST00000599389 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
CEACAM1-213ENST00000599389 BAZ1BQ9UIG0 1483 aaKnown RBP14.67□□□□□ -0.06
CEACAM1-213ENST00000599389 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
CEACAM1-213ENST00000599389 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
CEACAM1-213ENST00000599389 WDR62O43379 1518 aa14.62□□□□□ -0.07
CEACAM1-213ENST00000599389 MRC2Q9UBG0 1479 aa14.57□□□□□ -0.08
CEACAM1-213ENST00000599389 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
CEACAM1-213ENST00000599389 RIMBP3CA6NJZ7 1639 aa14.45□□□□□ -0.1
CEACAM1-213ENST00000599389 RIMBP3BA6NNM3 1639 aa14.45□□□□□ -0.1
CEACAM1-213ENST00000599389 RIMBP3Q9UFD9 1639 aa14.45□□□□□ -0.1
CEACAM1-213ENST00000599389 OSCARQ8IYS5 282 aa14.43□□□□□ -0.1
CEACAM1-213ENST00000599389 MROH2BQ7Z745 1585 aa14.42□□□□□ -0.1
CEACAM1-213ENST00000599389 CEP164Q9UPV0 1460 aa14.39□□□□□ -0.11
CEACAM1-213ENST00000599389 ARHGEF11O15085 1522 aa14.34□□□□□ -0.11
CEACAM1-213ENST00000599389 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
CEACAM1-213ENST00000599389 URB2Q14146 1524 aaKnown RBP14.28□□□□□ -0.12
CEACAM1-213ENST00000599389 CFTRP13569 1480 aa14.25□□□□□ -0.13
CEACAM1-213ENST00000599389 WIZO95785 1651 aa14.22□□□□□ -0.13
CEACAM1-213ENST00000599389 SENP3Q9H4L4 574 aaPredicted RBP14.2□□□□□ -0.14
CEACAM1-213ENST00000599389 ARAP1Q96P48 1450 aa14.17□□□□□ -0.14
CEACAM1-213ENST00000599389 ZNF608Q9ULD9 1512 aaPredicted RBP14.17□□□□□ -0.14
CEACAM1-213ENST00000599389 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
CEACAM1-213ENST00000599389 IFT140Q96RY7 1462 aa14.13□□□□□ -0.15
CEACAM1-213ENST00000599389 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
CEACAM1-213ENST00000599389 CYB5RLQ6IPT4 315 aa14.11□□□□□ -0.15
CEACAM1-213ENST00000599389 CHD1O14646 1710 aa14.1□□□□□ -0.15
CEACAM1-213ENST00000599389 RSF1Q96T23 1441 aaPredicted RBP14.08□□□□□ -0.16
CEACAM1-213ENST00000599389 TRHP20396 242 aaPredicted RBP14.06□□□□□ -0.16
CEACAM1-213ENST00000599389 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
CEACAM1-213ENST00000599389 TOPBP1Q92547 1522 aa14.02□□□□□ -0.16
CEACAM1-213ENST00000599389 TARBP1Q13395 1621 aaKnown RBP13.99□□□□□ -0.17
CEACAM1-213ENST00000599389 CLASP1Q7Z460 1538 aa13.96□□□□□ -0.17
CEACAM1-213ENST00000599389 DNMBPQ6XZF7 1577 aa13.94□□□□□ -0.18
CEACAM1-213ENST00000599389 ABCC8Q09428 1581 aa13.93□□□□□ -0.18
CEACAM1-213ENST00000599389 AQRO60306 1485 aaKnown RBP eCLIP13.92□□□□□ -0.188e-7■■□□□ 12.2
CEACAM1-213ENST00000599389 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.19
CEACAM1-213ENST00000599389 POLA1P09884 1462 aaPredicted RBP13.84□□□□□ -0.19
CEACAM1-213ENST00000599389 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
CEACAM1-213ENST00000599389 SYNJ1O43426 1573 aa13.82□□□□□ -0.2
CEACAM1-213ENST00000599389 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
CEACAM1-213ENST00000599389 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
CEACAM1-213ENST00000599389 FBLN2P98095 1184 aa13.79□□□□□ -0.2
CEACAM1-213ENST00000599389 MAGI1Q96QZ7 1491 aaPredicted RBP13.77□□□□□ -0.21
CEACAM1-213ENST00000599389 GAPVD1Q14C86 1478 aa13.76□□□□□ -0.21
CEACAM1-213ENST00000599389 RAD54L2Q9Y4B4 1467 aa13.75□□□□□ -0.21
CEACAM1-213ENST00000599389 SYNJ2O15056 1496 aa13.72□□□□□ -0.21
CEACAM1-213ENST00000599389 TDRD9Q8NDG6 1382 aaKnown RBP13.72□□□□□ -0.21
CEACAM1-213ENST00000599389 KIF13AQ9H1H9 1805 aa13.7□□□□□ -0.22
CEACAM1-213ENST00000599389 SOGA1O94964 1423 aa13.69□□□□□ -0.22
CEACAM1-213ENST00000599389 GRIN2BQ13224 1484 aa13.68□□□□□ -0.22
CEACAM1-213ENST00000599389 FGD5Q6ZNL6 1462 aa13.66□□□□□ -0.22
CEACAM1-213ENST00000599389 ERCC6L2Q5T890 1561 aa13.66□□□□□ -0.22
CEACAM1-213ENST00000599389 PBRM1Q86U86 1689 aa13.65□□□□□ -0.22
CEACAM1-213ENST00000599389 CHMP7Q8WUX9 453 aaPredicted RBP13.64□□□□□ -0.23
CEACAM1-213ENST00000599389 ILDR1Q86SU0 546 aaPredicted RBP13.61□□□□□ -0.23
CEACAM1-213ENST00000599389 CUX1P39880 1505 aa13.6□□□□□ -0.23
CEACAM1-213ENST00000599389 SHROOM2Q13796 1616 aa13.58□□□□□ -0.24
CEACAM1-213ENST00000599389 ABCA5Q8WWZ7 1642 aa13.58□□□□□ -0.24
CEACAM1-213ENST00000599389 CEP170Q5SW79 1584 aa13.58□□□□□ -0.24
CEACAM1-213ENST00000599389 NUP160Q12769 1436 aa13.53□□□□□ -0.24
CEACAM1-213ENST00000599389 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
CEACAM1-213ENST00000599389 ABCA10Q8WWZ4 1543 aa13.51□□□□□ -0.25
CEACAM1-213ENST00000599389 ADAMTS12P58397 1594 aa13.51□□□□□ -0.25
CEACAM1-213ENST00000599389 KDM4FA0A1W2PPD8 638 aa13.5□□□□□ -0.25
CEACAM1-213ENST00000599389 DIP2BQ9P265 1576 aa13.48□□□□□ -0.25
CEACAM1-213ENST00000599389 ABCC10Q5T3U5 1492 aa13.48□□□□□ -0.25
CEACAM1-213ENST00000599389 MAPKBP1O60336 1514 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms