RNA–Protein interactions for RNA: ENST00000599329.1

GTPBP3-219, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 3

Gene GTPBP3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-219ENST00000599329 NISCHQ9Y2I1 1504 aa38.09■■■■□ 3.69
GTPBP3-219ENST00000599329 CCDC180Q9P1Z9 1646 aa33.83■■■■□ 3.01
GTPBP3-219ENST00000599329 ABCC9O60706 1549 aa33.14■■■□□ 2.9
GTPBP3-219ENST00000599329 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
GTPBP3-219ENST00000599329 NACADO15069 1562 aa31.84■■■□□ 2.69
GTPBP3-219ENST00000599329 DCAF8L2P0C7V8 631 aa31.77■■■□□ 2.68
GTPBP3-219ENST00000599329 ZCCHC6Q5VYS8 1495 aaKnown RBP31.74■■■□□ 2.67
GTPBP3-219ENST00000599329 MYO15BQ96JP2 1530 aa31.67■■■□□ 2.66
GTPBP3-219ENST00000599329 DCAF1Q9Y4B6 1507 aa31.53■■■□□ 2.64
GTPBP3-219ENST00000599329 UNC13AQ9UPW8 1703 aa31.09■■■□□ 2.57
GTPBP3-219ENST00000599329 PABPN1Q86U42 306 aaKnown RBP eCLIP30.96■■■□□ 2.55
GTPBP3-219ENST00000599329 BICRAQ9NZM4 1560 aa30.92■■■□□ 2.54
GTPBP3-219ENST00000599329 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
GTPBP3-219ENST00000599329 SHROOM4Q9ULL8 1493 aa30.61■■■□□ 2.49
GTPBP3-219ENST00000599329 DNAJC5BQ9UF47 199 aa30.46■■■□□ 2.47
GTPBP3-219ENST00000599329 EIF4G1Q04637 1599 aaKnown RBP30.09■■■□□ 2.41
GTPBP3-219ENST00000599329 CC2D2AQ9P2K1 1620 aa29.96■■■□□ 2.39
GTPBP3-219ENST00000599329 CECR2Q9BXF3 1484 aa29.78■■■□□ 2.36
GTPBP3-219ENST00000599329 SMARCA4P51532 1647 aa29.54■■■□□ 2.32
GTPBP3-219ENST00000599329 BAZ1AQ9NRL2 1556 aaPredicted RBP29.51■■■□□ 2.31
GTPBP3-219ENST00000599329 ATAD2BQ9ULI0 1458 aa29.42■■■□□ 2.3
GTPBP3-219ENST00000599329 NCAPD3P42695 1498 aa29.41■■■□□ 2.3
GTPBP3-219ENST00000599329 MROH2BQ7Z745 1585 aa29.36■■■□□ 2.29
GTPBP3-219ENST00000599329 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
GTPBP3-219ENST00000599329 PEG3Q9GZU2 1588 aa29.28■■■□□ 2.28
GTPBP3-219ENST00000599329 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
GTPBP3-219ENST00000599329 BAZ1BQ9UIG0 1483 aaKnown RBP29.15■■■□□ 2.26
GTPBP3-219ENST00000599329 RSF1Q96T23 1441 aaPredicted RBP29.03■■■□□ 2.24
GTPBP3-219ENST00000599329 WIZO95785 1651 aa29■■■□□ 2.23
GTPBP3-219ENST00000599329 TOP2AP11388 1531 aaKnown RBP28.73■■■□□ 2.19
GTPBP3-219ENST00000599329 NESP48681 1621 aa28.68■■■□□ 2.18
GTPBP3-219ENST00000599329 LAMC3Q9Y6N6 1575 aa28.58■■■□□ 2.17
GTPBP3-219ENST00000599329 ERCC6Q03468 1493 aa28.54■■■□□ 2.16
GTPBP3-219ENST00000599329 CADPSQ9ULU8 1353 aa28.53■■■□□ 2.16
GTPBP3-219ENST00000599329 PDS5BQ9NTI5 1447 aa28.41■■■□□ 2.14
GTPBP3-219ENST00000599329 CCDC88BA6NC98 1476 aa28.4■■■□□ 2.14
GTPBP3-219ENST00000599329 CFTRP13569 1480 aa28.37■■■□□ 2.13
GTPBP3-219ENST00000599329 KIF21AQ7Z4S6 1674 aa28.29■■■□□ 2.12
GTPBP3-219ENST00000599329 CUX2O14529 1486 aa28.27■■■□□ 2.12
GTPBP3-219ENST00000599329 THOC2Q8NI27 1593 aaKnown RBP28.24■■■□□ 2.11
GTPBP3-219ENST00000599329 SUPT5HO00267 1087 aaKnown RBP28.24■■■□□ 2.11
GTPBP3-219ENST00000599329 FANCD2Q9BXW9 1451 aa28.2■■■□□ 2.1
GTPBP3-219ENST00000599329 CEP164Q9UPV0 1460 aa28.16■■■□□ 2.1
GTPBP3-219ENST00000599329 MRC2Q9UBG0 1479 aa28.13■■■□□ 2.09
GTPBP3-219ENST00000599329 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
GTPBP3-219ENST00000599329 WDR62O43379 1518 aa28.04■■■□□ 2.08
GTPBP3-219ENST00000599329 URB2Q14146 1524 aaKnown RBP27.93■■■□□ 2.06
GTPBP3-219ENST00000599329 TOPBP1Q92547 1522 aa27.76■■■□□ 2.03
GTPBP3-219ENST00000599329 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
GTPBP3-219ENST00000599329 DNMBPQ6XZF7 1577 aa27.7■■■□□ 2.03
GTPBP3-219ENST00000599329 IFT140Q96RY7 1462 aa27.57■■■□□ 2
GTPBP3-219ENST00000599329 CUX1P39880 1505 aa27.55■■■□□ 2
GTPBP3-219ENST00000599329 POLA1P09884 1462 aaPredicted RBP27.52■■■□□ 2
GTPBP3-219ENST00000599329 ZNF608Q9ULD9 1512 aaPredicted RBP27.46■■□□□ 1.99
GTPBP3-219ENST00000599329 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
GTPBP3-219ENST00000599329 TARBP1Q13395 1621 aaKnown RBP27.44■■□□□ 1.98
GTPBP3-219ENST00000599329 DNAJC5Q9H3Z4 198 aa27.42■■□□□ 1.98
GTPBP3-219ENST00000599329 SOGA1O94964 1423 aa27.4■■□□□ 1.98
GTPBP3-219ENST00000599329 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
GTPBP3-219ENST00000599329 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.97
GTPBP3-219ENST00000599329 EIF4G3O43432 1585 aaKnown RBP27.33■■□□□ 1.97
GTPBP3-219ENST00000599329 AQRO60306 1485 aaKnown RBP eCLIP27.3■■□□□ 1.962e-8■■■■■ 36.7
GTPBP3-219ENST00000599329 TOP2BQ02880 1626 aa27.28■■□□□ 1.96
GTPBP3-219ENST00000599329 SYNJ1O43426 1573 aa27.28■■□□□ 1.96
GTPBP3-219ENST00000599329 BIVM-ERCC5R4GMW8 1640 aa27.27■■□□□ 1.96
GTPBP3-219ENST00000599329 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
GTPBP3-219ENST00000599329 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
GTPBP3-219ENST00000599329 ABCA10Q8WWZ4 1543 aa27.19■■□□□ 1.94
GTPBP3-219ENST00000599329 GRIN2BQ13224 1484 aa27.08■■□□□ 1.93
GTPBP3-219ENST00000599329 OSCARQ8IYS5 282 aa27.08■■□□□ 1.93
GTPBP3-219ENST00000599329 GAPVD1Q14C86 1478 aa27.07■■□□□ 1.92
GTPBP3-219ENST00000599329 ABCA5Q8WWZ7 1642 aa27.07■■□□□ 1.92
GTPBP3-219ENST00000599329 SNAPC4Q5SXM2 1469 aa27.04■■□□□ 1.92
GTPBP3-219ENST00000599329 MAGI1Q96QZ7 1491 aaPredicted RBP27.01■■□□□ 1.91
GTPBP3-219ENST00000599329 PBRM1Q86U86 1689 aa26.97■■□□□ 1.91
GTPBP3-219ENST00000599329 CHD1O14646 1710 aa26.94■■□□□ 1.9
GTPBP3-219ENST00000599329 FBLN2P98095 1184 aa26.93■■□□□ 1.9
GTPBP3-219ENST00000599329 SYNJ2O15056 1496 aa26.91■■□□□ 1.9
GTPBP3-219ENST00000599329 CHMP7Q8WUX9 453 aaPredicted RBP26.87■■□□□ 1.89
GTPBP3-219ENST00000599329 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
GTPBP3-219ENST00000599329 ADAMTS12P58397 1594 aa26.81■■□□□ 1.88
GTPBP3-219ENST00000599329 KIF27Q86VH2 1401 aa26.78■■□□□ 1.88
GTPBP3-219ENST00000599329 FHAD1B1AJZ9 1412 aa26.77■■□□□ 1.88
GTPBP3-219ENST00000599329 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
GTPBP3-219ENST00000599329 CLASP1Q7Z460 1538 aa26.72■■□□□ 1.87
GTPBP3-219ENST00000599329 IGF1RP08069 1367 aa26.7■■□□□ 1.86
GTPBP3-219ENST00000599329 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
GTPBP3-219ENST00000599329 ARHGEF11O15085 1522 aa26.66■■□□□ 1.86
GTPBP3-219ENST00000599329 RIMBP3CA6NJZ7 1639 aa26.64■■□□□ 1.85
GTPBP3-219ENST00000599329 RIMBP3BA6NNM3 1639 aa26.64■■□□□ 1.85
GTPBP3-219ENST00000599329 RIMBP3Q9UFD9 1639 aa26.64■■□□□ 1.85
GTPBP3-219ENST00000599329 NUP160Q12769 1436 aa26.64■■□□□ 1.85
GTPBP3-219ENST00000599329 CEP170Q5SW79 1584 aa26.6■■□□□ 1.85
GTPBP3-219ENST00000599329 CUL7Q14999 1698 aa26.57■■□□□ 1.84
GTPBP3-219ENST00000599329 RUSC2Q8N2Y8 1516 aa26.55■■□□□ 1.84
GTPBP3-219ENST00000599329 CARMIL1Q5VZK9 1371 aa26.52■■□□□ 1.84
GTPBP3-219ENST00000599329 ARAP1Q96P48 1450 aa26.46■■□□□ 1.83
GTPBP3-219ENST00000599329 SHROOM2Q13796 1616 aa26.41■■□□□ 1.82
GTPBP3-219ENST00000599329 CYB5RLQ6IPT4 315 aa26.4■■□□□ 1.82
GTPBP3-219ENST00000599329 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms