RNA–Protein interactions for RNA: ENST00000598956.5

SELENOW-207, Transcript of selenoprotein W, humanhuman

TSL 2

Gene SELENOW, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOW-207ENST00000598956 NISCHQ9Y2I1 1504 aa31.49■■■□□ 2.63
SELENOW-207ENST00000598956 CCDC180Q9P1Z9 1646 aa27.91■■■□□ 2.06
SELENOW-207ENST00000598956 ABCC9O60706 1549 aa27.37■■□□□ 1.97
SELENOW-207ENST00000598956 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
SELENOW-207ENST00000598956 RB1CC1Q8TDY2 1594 aa26.25■■□□□ 1.79
SELENOW-207ENST00000598956 NACADO15069 1562 aa26.24■■□□□ 1.79
SELENOW-207ENST00000598956 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
SELENOW-207ENST00000598956 MYO15BQ96JP2 1530 aa26.06■■□□□ 1.76
SELENOW-207ENST00000598956 DCAF1Q9Y4B6 1507 aa25.99■■□□□ 1.75
SELENOW-207ENST00000598956 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
SELENOW-207ENST00000598956 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.69
SELENOW-207ENST00000598956 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.69
SELENOW-207ENST00000598956 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
SELENOW-207ENST00000598956 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
SELENOW-207ENST00000598956 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
SELENOW-207ENST00000598956 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
SELENOW-207ENST00000598956 CC2D2AQ9P2K1 1620 aa24.75■■□□□ 1.55
SELENOW-207ENST00000598956 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
SELENOW-207ENST00000598956 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
SELENOW-207ENST00000598956 BAZ1AQ9NRL2 1556 aaPredicted RBP24.34■■□□□ 1.49
SELENOW-207ENST00000598956 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
SELENOW-207ENST00000598956 ATAD2BQ9ULI0 1458 aa24.29■■□□□ 1.48
SELENOW-207ENST00000598956 NCAPD3P42695 1498 aa24.24■■□□□ 1.47
SELENOW-207ENST00000598956 SMARCA2P51531 1590 aa24.19■■□□□ 1.46
SELENOW-207ENST00000598956 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
SELENOW-207ENST00000598956 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
SELENOW-207ENST00000598956 WIZO95785 1651 aa24.06■■□□□ 1.44
SELENOW-207ENST00000598956 BAZ1BQ9UIG0 1483 aaKnown RBP24.05■■□□□ 1.44
SELENOW-207ENST00000598956 RSF1Q96T23 1441 aaPredicted RBP24.03■■□□□ 1.44
SELENOW-207ENST00000598956 NESP48681 1621 aa23.74■■□□□ 1.39
SELENOW-207ENST00000598956 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
SELENOW-207ENST00000598956 LAMC3Q9Y6N6 1575 aa23.56■■□□□ 1.36
SELENOW-207ENST00000598956 CADPSQ9ULU8 1353 aa23.54■■□□□ 1.36
SELENOW-207ENST00000598956 ERCC6Q03468 1493 aa23.51■■□□□ 1.35
SELENOW-207ENST00000598956 CCDC88BA6NC98 1476 aa23.5■■□□□ 1.35
SELENOW-207ENST00000598956 SUPT5HO00267 1087 aaKnown RBP23.45■■□□□ 1.34
SELENOW-207ENST00000598956 KIF21AQ7Z4S6 1674 aa23.43■■□□□ 1.34
SELENOW-207ENST00000598956 CFTRP13569 1480 aa23.42■■□□□ 1.34
SELENOW-207ENST00000598956 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.33
SELENOW-207ENST00000598956 THOC2Q8NI27 1593 aaKnown RBP23.32■■□□□ 1.32
SELENOW-207ENST00000598956 FANCD2Q9BXW9 1451 aa23.28■■□□□ 1.32
SELENOW-207ENST00000598956 CUX2O14529 1486 aa23.24■■□□□ 1.31
SELENOW-207ENST00000598956 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
SELENOW-207ENST00000598956 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
SELENOW-207ENST00000598956 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
SELENOW-207ENST00000598956 WDR62O43379 1518 aa23.13■■□□□ 1.29
SELENOW-207ENST00000598956 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
SELENOW-207ENST00000598956 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
SELENOW-207ENST00000598956 DNMBPQ6XZF7 1577 aa22.88■■□□□ 1.25
SELENOW-207ENST00000598956 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
SELENOW-207ENST00000598956 CUX1P39880 1505 aa22.8■■□□□ 1.24
SELENOW-207ENST00000598956 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
SELENOW-207ENST00000598956 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
SELENOW-207ENST00000598956 ZNF608Q9ULD9 1512 aaPredicted RBP22.72■■□□□ 1.23
SELENOW-207ENST00000598956 TARBP1Q13395 1621 aaKnown RBP22.69■■□□□ 1.22
SELENOW-207ENST00000598956 FGD5Q6ZNL6 1462 aa22.68■■□□□ 1.22
SELENOW-207ENST00000598956 RAD54L2Q9Y4B4 1467 aa22.68■■□□□ 1.22
SELENOW-207ENST00000598956 SOGA1O94964 1423 aa22.62■■□□□ 1.21
SELENOW-207ENST00000598956 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
SELENOW-207ENST00000598956 WRNQ14191 1432 aaPredicted RBP eCLIP22.6■■□□□ 1.21
SELENOW-207ENST00000598956 AQRO60306 1485 aaKnown RBP eCLIP22.58■■□□□ 1.22e-7■■■■■ 27.9
SELENOW-207ENST00000598956 EIF4G3O43432 1585 aaKnown RBP22.57■■□□□ 1.2
SELENOW-207ENST00000598956 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
SELENOW-207ENST00000598956 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
SELENOW-207ENST00000598956 DNAJC5Q9H3Z4 198 aa22.55■■□□□ 1.2
SELENOW-207ENST00000598956 TDRD9Q8NDG6 1382 aaKnown RBP22.53■■□□□ 1.2
SELENOW-207ENST00000598956 WDR97A6NE52 1622 aa22.5■■□□□ 1.19
SELENOW-207ENST00000598956 ABCA10Q8WWZ4 1543 aa22.44■■□□□ 1.18
SELENOW-207ENST00000598956 GAPVD1Q14C86 1478 aa22.36■■□□□ 1.17
SELENOW-207ENST00000598956 ABCA5Q8WWZ7 1642 aa22.36■■□□□ 1.17
SELENOW-207ENST00000598956 SNAPC4Q5SXM2 1469 aa22.34■■□□□ 1.17
SELENOW-207ENST00000598956 GRIN2BQ13224 1484 aa22.33■■□□□ 1.16
SELENOW-207ENST00000598956 PBRM1Q86U86 1689 aa22.33■■□□□ 1.16
SELENOW-207ENST00000598956 OSCARQ8IYS5 282 aa22.31■■□□□ 1.16
SELENOW-207ENST00000598956 CHD1O14646 1710 aa22.31■■□□□ 1.16
SELENOW-207ENST00000598956 FBLN2P98095 1184 aa22.25■■□□□ 1.15
SELENOW-207ENST00000598956 MAGI1Q96QZ7 1491 aaPredicted RBP22.25■■□□□ 1.15
SELENOW-207ENST00000598956 SYNJ2O15056 1496 aa22.18■■□□□ 1.14
SELENOW-207ENST00000598956 CHMP7Q8WUX9 453 aaPredicted RBP22.17■■□□□ 1.14
SELENOW-207ENST00000598956 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
SELENOW-207ENST00000598956 ADAMTS12P58397 1594 aa22.14■■□□□ 1.13
SELENOW-207ENST00000598956 KIF27Q86VH2 1401 aa22.1■■□□□ 1.13
SELENOW-207ENST00000598956 TRIM41Q8WV44 630 aa22.09■■□□□ 1.13
SELENOW-207ENST00000598956 FHAD1B1AJZ9 1412 aa22.08■■□□□ 1.13
SELENOW-207ENST00000598956 IGF1RP08069 1367 aa22.08■■□□□ 1.12
SELENOW-207ENST00000598956 RUSC2Q8N2Y8 1516 aa22.06■■□□□ 1.12
SELENOW-207ENST00000598956 GRIN2AQ12879 1464 aa22.06■■□□□ 1.12
SELENOW-207ENST00000598956 CLASP1Q7Z460 1538 aa22.05■■□□□ 1.12
SELENOW-207ENST00000598956 RIMBP3CA6NJZ7 1639 aa22■■□□□ 1.11
SELENOW-207ENST00000598956 RIMBP3BA6NNM3 1639 aa22■■□□□ 1.11
SELENOW-207ENST00000598956 RIMBP3Q9UFD9 1639 aa22■■□□□ 1.11
SELENOW-207ENST00000598956 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
SELENOW-207ENST00000598956 ARHGEF11O15085 1522 aa21.98■■□□□ 1.11
SELENOW-207ENST00000598956 NUP160Q12769 1436 aa21.97■■□□□ 1.11
SELENOW-207ENST00000598956 CUL7Q14999 1698 aa21.94■■□□□ 1.1
SELENOW-207ENST00000598956 CHIC1Q5VXU3 224 aa21.93■■□□□ 1.1
SELENOW-207ENST00000598956 CARMIL1Q5VZK9 1371 aa21.92■■□□□ 1.1
SELENOW-207ENST00000598956 ARAP1Q96P48 1450 aa21.84■■□□□ 1.09
SELENOW-207ENST00000598956 ERCC6L2Q5T890 1561 aa21.83■■□□□ 1.09
SELENOW-207ENST00000598956 SHROOM2Q13796 1616 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms