RNA–Protein interactions for RNA: ENST00000598926.5

TMEM143-209, Transcript of transmembrane protein 143, humanhuman

TSL 5

Gene TMEM143, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-209ENST00000598926 NISCHQ9Y2I1 1504 aa44.94■■■■■ 4.78
TMEM143-209ENST00000598926 CCDC180Q9P1Z9 1646 aa40.09■■■■■ 4.01
TMEM143-209ENST00000598926 ABCC9O60706 1549 aa38.96■■■■□ 3.83
TMEM143-209ENST00000598926 RB1CC1Q8TDY2 1594 aa37.6■■■■□ 3.61
TMEM143-209ENST00000598926 NACADO15069 1562 aa37.57■■■■□ 3.6
TMEM143-209ENST00000598926 ZCCHC6Q5VYS8 1495 aaKnown RBP37.5■■■■□ 3.59
TMEM143-209ENST00000598926 MYO15BQ96JP2 1530 aa37.38■■■■□ 3.57
TMEM143-209ENST00000598926 DCAF8L2P0C7V8 631 aa37.25■■■■□ 3.55
TMEM143-209ENST00000598926 DCAF1Q9Y4B6 1507 aa37.24■■■■□ 3.55
TMEM143-209ENST00000598926 UNC13AQ9UPW8 1703 aa36.9■■■■□ 3.5
TMEM143-209ENST00000598926 SCRIBQ14160 1630 aa36.48■■■■□ 3.43
TMEM143-209ENST00000598926 BICRAQ9NZM4 1560 aa36.47■■■■□ 3.43
TMEM143-209ENST00000598926 PABPN1Q86U42 306 aaKnown RBP eCLIP36.29■■■■□ 3.4
TMEM143-209ENST00000598926 SHROOM4Q9ULL8 1493 aa36.14■■■■□ 3.38
TMEM143-209ENST00000598926 DNAJC5BQ9UF47 199 aa35.57■■■■□ 3.28
TMEM143-209ENST00000598926 EIF4G1Q04637 1599 aaKnown RBP35.5■■■■□ 3.27
TMEM143-209ENST00000598926 CC2D2AQ9P2K1 1620 aa35.33■■■■□ 3.25
TMEM143-209ENST00000598926 CECR2Q9BXF3 1484 aa35.02■■■■□ 3.2
TMEM143-209ENST00000598926 SMARCA4P51532 1647 aa34.93■■■■□ 3.18
TMEM143-209ENST00000598926 BAZ1AQ9NRL2 1556 aaPredicted RBP34.86■■■■□ 3.17
TMEM143-209ENST00000598926 SMARCA2P51531 1590 aa34.66■■■■□ 3.14
TMEM143-209ENST00000598926 ATAD2BQ9ULI0 1458 aa34.63■■■■□ 3.13
TMEM143-209ENST00000598926 MROH2BQ7Z745 1585 aa34.62■■■■□ 3.13
TMEM143-209ENST00000598926 PEG3Q9GZU2 1588 aa34.6■■■■□ 3.13
TMEM143-209ENST00000598926 NCAPD3P42695 1498 aa34.58■■■■□ 3.13
TMEM143-209ENST00000598926 HMGXB3Q12766 1538 aa34.54■■■■□ 3.12
TMEM143-209ENST00000598926 BAZ1BQ9UIG0 1483 aaKnown RBP34.38■■■■□ 3.09
TMEM143-209ENST00000598926 WIZO95785 1651 aa34.3■■■■□ 3.08
TMEM143-209ENST00000598926 RSF1Q96T23 1441 aaPredicted RBP34.2■■■■□ 3.06
TMEM143-209ENST00000598926 TOP2AP11388 1531 aaKnown RBP33.96■■■■□ 3.03
TMEM143-209ENST00000598926 LAMC3Q9Y6N6 1575 aa33.76■■■□□ 2.99
TMEM143-209ENST00000598926 NESP48681 1621 aa33.75■■■□□ 2.99
TMEM143-209ENST00000598926 ERCC6Q03468 1493 aa33.6■■■□□ 2.97
TMEM143-209ENST00000598926 CADPSQ9ULU8 1353 aa33.54■■■□□ 2.96
TMEM143-209ENST00000598926 KIF21AQ7Z4S6 1674 aa33.5■■■□□ 2.95
TMEM143-209ENST00000598926 CCDC88BA6NC98 1476 aa33.45■■■□□ 2.95
TMEM143-209ENST00000598926 PDS5BQ9NTI5 1447 aa33.43■■■□□ 2.94
TMEM143-209ENST00000598926 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
TMEM143-209ENST00000598926 CFTRP13569 1480 aa33.42■■■□□ 2.94
TMEM143-209ENST00000598926 THOC2Q8NI27 1593 aaKnown RBP33.36■■■□□ 2.93
TMEM143-209ENST00000598926 CUX2O14529 1486 aa33.27■■■□□ 2.92
TMEM143-209ENST00000598926 SUPT5HO00267 1087 aaKnown RBP33.22■■■□□ 2.91
TMEM143-209ENST00000598926 FANCD2Q9BXW9 1451 aa33.22■■■□□ 2.91
TMEM143-209ENST00000598926 CEP164Q9UPV0 1460 aa33.2■■■□□ 2.91
TMEM143-209ENST00000598926 MRC2Q9UBG0 1479 aa33.14■■■□□ 2.9
TMEM143-209ENST00000598926 WDR62O43379 1518 aa33.09■■■□□ 2.89
TMEM143-209ENST00000598926 URB2Q14146 1524 aaKnown RBP32.9■■■□□ 2.86
TMEM143-209ENST00000598926 DNMBPQ6XZF7 1577 aa32.74■■■□□ 2.83
TMEM143-209ENST00000598926 TOPBP1Q92547 1522 aa32.72■■■□□ 2.83
TMEM143-209ENST00000598926 DNAJC5Q9H3Z4 198 aa32.71■■■□□ 2.83
TMEM143-209ENST00000598926 ABCC8Q09428 1581 aa32.7■■■□□ 2.82
TMEM143-209ENST00000598926 CUX1P39880 1505 aa32.51■■■□□ 2.79
TMEM143-209ENST00000598926 IFT140Q96RY7 1462 aa32.48■■■□□ 2.79
TMEM143-209ENST00000598926 POLA1P09884 1462 aaPredicted RBP32.44■■■□□ 2.78
TMEM143-209ENST00000598926 TARBP1Q13395 1621 aaKnown RBP32.41■■■□□ 2.78
TMEM143-209ENST00000598926 FGD5Q6ZNL6 1462 aa32.37■■■□□ 2.77
TMEM143-209ENST00000598926 BIVM-ERCC5R4GMW8 1640 aa32.32■■■□□ 2.76
TMEM143-209ENST00000598926 ZNF608Q9ULD9 1512 aaPredicted RBP32.31■■■□□ 2.76
TMEM143-209ENST00000598926 EIF4G3O43432 1585 aaKnown RBP32.31■■■□□ 2.76
TMEM143-209ENST00000598926 TOP2BQ02880 1626 aa32.28■■■□□ 2.76
TMEM143-209ENST00000598926 SYNJ1O43426 1573 aa32.27■■■□□ 2.76
TMEM143-209ENST00000598926 WRNQ14191 1432 aaPredicted RBP eCLIP32.26■■■□□ 2.76
TMEM143-209ENST00000598926 WDR97A6NE52 1622 aa32.26■■■□□ 2.75
TMEM143-209ENST00000598926 RAD54L2Q9Y4B4 1467 aa32.24■■■□□ 2.75
TMEM143-209ENST00000598926 SOGA1O94964 1423 aa32.21■■■□□ 2.75
TMEM143-209ENST00000598926 AQRO60306 1485 aaKnown RBP eCLIP32.08■■■□□ 2.734e-7■■■■■ 29.2
TMEM143-209ENST00000598926 ABCA10Q8WWZ4 1543 aa32.06■■■□□ 2.72
TMEM143-209ENST00000598926 ABCA5Q8WWZ7 1642 aa32.02■■■□□ 2.72
TMEM143-209ENST00000598926 PBRM1Q86U86 1689 aa32.01■■■□□ 2.71
TMEM143-209ENST00000598926 TDRD9Q8NDG6 1382 aaKnown RBP32■■■□□ 2.71
TMEM143-209ENST00000598926 CHD1O14646 1710 aa31.93■■■□□ 2.7
TMEM143-209ENST00000598926 GAPVD1Q14C86 1478 aa31.91■■■□□ 2.7
TMEM143-209ENST00000598926 GRIN2BQ13224 1484 aa31.9■■■□□ 2.7
TMEM143-209ENST00000598926 SNAPC4Q5SXM2 1469 aa31.87■■■□□ 2.69
TMEM143-209ENST00000598926 MAGI1Q96QZ7 1491 aaPredicted RBP31.85■■■□□ 2.69
TMEM143-209ENST00000598926 OSCARQ8IYS5 282 aa31.72■■■□□ 2.67
TMEM143-209ENST00000598926 ADAMTS12P58397 1594 aa31.72■■■□□ 2.67
TMEM143-209ENST00000598926 ERICH3Q5RHP9 1530 aa31.71■■■□□ 2.67
TMEM143-209ENST00000598926 SYNJ2O15056 1496 aa31.71■■■□□ 2.67
TMEM143-209ENST00000598926 KIF27Q86VH2 1401 aa31.58■■■□□ 2.65
TMEM143-209ENST00000598926 FBLN2P98095 1184 aa31.58■■■□□ 2.65
TMEM143-209ENST00000598926 CHMP7Q8WUX9 453 aaPredicted RBP31.54■■■□□ 2.64
TMEM143-209ENST00000598926 FHAD1B1AJZ9 1412 aa31.53■■■□□ 2.64
TMEM143-209ENST00000598926 CLASP1Q7Z460 1538 aa31.52■■■□□ 2.64
TMEM143-209ENST00000598926 GRIN2AQ12879 1464 aa31.52■■■□□ 2.64
TMEM143-209ENST00000598926 CUL7Q14999 1698 aa31.51■■■□□ 2.63
TMEM143-209ENST00000598926 RIMBP3CA6NJZ7 1639 aa31.42■■■□□ 2.62
TMEM143-209ENST00000598926 RIMBP3BA6NNM3 1639 aa31.42■■■□□ 2.62
TMEM143-209ENST00000598926 RIMBP3Q9UFD9 1639 aa31.42■■■□□ 2.62
TMEM143-209ENST00000598926 TRIM41Q8WV44 630 aa31.4■■■□□ 2.62
TMEM143-209ENST00000598926 CEP170Q5SW79 1584 aa31.39■■■□□ 2.62
TMEM143-209ENST00000598926 ARHGEF11O15085 1522 aa31.39■■■□□ 2.61
TMEM143-209ENST00000598926 NUP160Q12769 1436 aa31.38■■■□□ 2.61
TMEM143-209ENST00000598926 IGF1RP08069 1367 aa31.37■■■□□ 2.61
TMEM143-209ENST00000598926 RUSC2Q8N2Y8 1516 aa31.28■■■□□ 2.6
TMEM143-209ENST00000598926 SHROOM2Q13796 1616 aa31.22■■■□□ 2.59
TMEM143-209ENST00000598926 CARMIL1Q5VZK9 1371 aa31.2■■■□□ 2.59
TMEM143-209ENST00000598926 ARAP1Q96P48 1450 aa31.13■■■□□ 2.57
TMEM143-209ENST00000598926 RAPGEF2Q9Y4G8 1499 aa31.08■■■□□ 2.57
TMEM143-209ENST00000598926 CHIC1Q5VXU3 224 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms