RNA–Protein interactions for RNA: ENST00000598708.1

LRMDA-214, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-214ENST00000598708 NISCHQ9Y2I1 1504 aa18.36■□□□□ 0.53
LRMDA-214ENST00000598708 CCDC180Q9P1Z9 1646 aa16.43■□□□□ 0.22
LRMDA-214ENST00000598708 ABCC9O60706 1549 aa15.78■□□□□ 0.12
LRMDA-214ENST00000598708 NACADO15069 1562 aa15.33■□□□□ 0.05
LRMDA-214ENST00000598708 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.04
LRMDA-214ENST00000598708 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
LRMDA-214ENST00000598708 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
LRMDA-214ENST00000598708 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.03
LRMDA-214ENST00000598708 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
LRMDA-214ENST00000598708 DCAF8L2P0C7V8 631 aa15.03■□□□□ -0
LRMDA-214ENST00000598708 BICRAQ9NZM4 1560 aa14.91□□□□□ -0.02
LRMDA-214ENST00000598708 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
LRMDA-214ENST00000598708 SHROOM4Q9ULL8 1493 aa14.75□□□□□ -0.05
LRMDA-214ENST00000598708 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
LRMDA-214ENST00000598708 EIF4G1Q04637 1599 aaKnown RBP14.47□□□□□ -0.09
LRMDA-214ENST00000598708 DNAJC5BQ9UF47 199 aa14.41□□□□□ -0.1
LRMDA-214ENST00000598708 CC2D2AQ9P2K1 1620 aa14.39□□□□□ -0.11
LRMDA-214ENST00000598708 SMARCA4P51532 1647 aa14.27□□□□□ -0.12
LRMDA-214ENST00000598708 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
LRMDA-214ENST00000598708 BAZ1AQ9NRL2 1556 aaPredicted RBP14.24□□□□□ -0.13
LRMDA-214ENST00000598708 PEG3Q9GZU2 1588 aa14.18□□□□□ -0.14
LRMDA-214ENST00000598708 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
LRMDA-214ENST00000598708 SMARCA2P51531 1590 aa14.13□□□□□ -0.15
LRMDA-214ENST00000598708 NCAPD3P42695 1498 aa14.11□□□□□ -0.15
LRMDA-214ENST00000598708 ATAD2BQ9ULI0 1458 aa14.11□□□□□ -0.15
LRMDA-214ENST00000598708 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
LRMDA-214ENST00000598708 WIZO95785 1651 aa14.04□□□□□ -0.16
LRMDA-214ENST00000598708 BAZ1BQ9UIG0 1483 aaKnown RBP13.97□□□□□ -0.17
LRMDA-214ENST00000598708 RSF1Q96T23 1441 aaPredicted RBP13.96□□□□□ -0.18
LRMDA-214ENST00000598708 TOP2AP11388 1531 aaKnown RBP13.87□□□□□ -0.19
LRMDA-214ENST00000598708 LAMC3Q9Y6N6 1575 aa13.78□□□□□ -0.2
LRMDA-214ENST00000598708 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
LRMDA-214ENST00000598708 NESP48681 1621 aa13.72□□□□□ -0.21
LRMDA-214ENST00000598708 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
LRMDA-214ENST00000598708 CCDC88BA6NC98 1476 aa13.65□□□□□ -0.22
LRMDA-214ENST00000598708 CADPSQ9ULU8 1353 aa13.64□□□□□ -0.23
LRMDA-214ENST00000598708 CFTRP13569 1480 aa13.63□□□□□ -0.23
LRMDA-214ENST00000598708 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
LRMDA-214ENST00000598708 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
LRMDA-214ENST00000598708 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
LRMDA-214ENST00000598708 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
LRMDA-214ENST00000598708 CUX2O14529 1486 aa13.5□□□□□ -0.25
LRMDA-214ENST00000598708 FANCD2Q9BXW9 1451 aa13.5□□□□□ -0.25
LRMDA-214ENST00000598708 WDR62O43379 1518 aa13.49□□□□□ -0.25
LRMDA-214ENST00000598708 CEP164Q9UPV0 1460 aa13.48□□□□□ -0.25
LRMDA-214ENST00000598708 MRC2Q9UBG0 1479 aa13.46□□□□□ -0.25
LRMDA-214ENST00000598708 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
LRMDA-214ENST00000598708 DNMBPQ6XZF7 1577 aa13.35□□□□□ -0.27
LRMDA-214ENST00000598708 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
LRMDA-214ENST00000598708 TOPBP1Q92547 1522 aa13.33□□□□□ -0.28
LRMDA-214ENST00000598708 CHIC1Q5VXU3 224 aa13.29□□□□□ -0.28
LRMDA-214ENST00000598708 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.29
LRMDA-214ENST00000598708 CUX1P39880 1505 aa13.26□□□□□ -0.29
LRMDA-214ENST00000598708 TARBP1Q13395 1621 aaKnown RBP13.26□□□□□ -0.29
LRMDA-214ENST00000598708 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
LRMDA-214ENST00000598708 TOP2BQ02880 1626 aa13.21□□□□□ -0.29
LRMDA-214ENST00000598708 POLA1P09884 1462 aaPredicted RBP13.21□□□□□ -0.3
LRMDA-214ENST00000598708 IFT140Q96RY7 1462 aa13.21□□□□□ -0.3
LRMDA-214ENST00000598708 SYNJ1O43426 1573 aa13.19□□□□□ -0.3
LRMDA-214ENST00000598708 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
LRMDA-214ENST00000598708 EIF4G3O43432 1585 aaKnown RBP13.17□□□□□ -0.3
LRMDA-214ENST00000598708 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
LRMDA-214ENST00000598708 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
LRMDA-214ENST00000598708 PBRM1Q86U86 1689 aa13.11□□□□□ -0.31
LRMDA-214ENST00000598708 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
LRMDA-214ENST00000598708 SOGA1O94964 1423 aa13.1□□□□□ -0.31
LRMDA-214ENST00000598708 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
LRMDA-214ENST00000598708 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.31
LRMDA-214ENST00000598708 CHD1O14646 1710 aa13.05□□□□□ -0.32
LRMDA-214ENST00000598708 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.32
LRMDA-214ENST00000598708 TDRD9Q8NDG6 1382 aaKnown RBP12.98□□□□□ -0.33
LRMDA-214ENST00000598708 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
LRMDA-214ENST00000598708 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
LRMDA-214ENST00000598708 MAGI1Q96QZ7 1491 aaPredicted RBP12.97□□□□□ -0.33
LRMDA-214ENST00000598708 ERICH3Q5RHP9 1530 aa12.94□□□□□ -0.34
LRMDA-214ENST00000598708 SNAPC4Q5SXM2 1469 aa12.94□□□□□ -0.34
LRMDA-214ENST00000598708 ADAMTS12P58397 1594 aa12.94□□□□□ -0.34
LRMDA-214ENST00000598708 DNAJC5Q9H3Z4 198 aa12.92□□□□□ -0.34
LRMDA-214ENST00000598708 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
LRMDA-214ENST00000598708 CUL7Q14999 1698 aa12.89□□□□□ -0.35
LRMDA-214ENST00000598708 CLASP1Q7Z460 1538 aa12.85□□□□□ -0.35
LRMDA-214ENST00000598708 KIF27Q86VH2 1401 aa12.85□□□□□ -0.35
LRMDA-214ENST00000598708 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.36
LRMDA-214ENST00000598708 OSCARQ8IYS5 282 aa12.83□□□□□ -0.36
LRMDA-214ENST00000598708 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
LRMDA-214ENST00000598708 GRIN2AQ12879 1464 aa12.83□□□□□ -0.36
LRMDA-214ENST00000598708 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
LRMDA-214ENST00000598708 IGF1RP08069 1367 aa12.79□□□□□ -0.36
LRMDA-214ENST00000598708 RUSC2Q8N2Y8 1516 aa12.78□□□□□ -0.36
LRMDA-214ENST00000598708 RIMBP3CA6NJZ7 1639 aa12.78□□□□□ -0.36
LRMDA-214ENST00000598708 RIMBP3BA6NNM3 1639 aa12.78□□□□□ -0.36
LRMDA-214ENST00000598708 SHROOM2Q13796 1616 aa12.78□□□□□ -0.36
LRMDA-214ENST00000598708 RIMBP3Q9UFD9 1639 aa12.78□□□□□ -0.36
LRMDA-214ENST00000598708 NUP160Q12769 1436 aa12.78□□□□□ -0.36
LRMDA-214ENST00000598708 CHMP7Q8WUX9 453 aaPredicted RBP12.75□□□□□ -0.37
LRMDA-214ENST00000598708 ARHGEF11O15085 1522 aa12.73□□□□□ -0.37
LRMDA-214ENST00000598708 CTTNBP2Q8WZ74 1663 aa12.73□□□□□ -0.37
LRMDA-214ENST00000598708 FBLN2P98095 1184 aa12.72□□□□□ -0.37
LRMDA-214ENST00000598708 LOC105371045A0A1W2PR82 267 aa12.7□□□□□ -0.38
LRMDA-214ENST00000598708 CARMIL1Q5VZK9 1371 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms