RNA–Protein interactions for RNA: ENST00000598647.1

CPT1C-219, Transcript of carnitine palmitoyltransferase 1C, humanhuman

TSL 3

Gene CPT1C, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1C-219ENST00000598647 NISCHQ9Y2I1 1504 aa26.26■■□□□ 1.79
CPT1C-219ENST00000598647 ABCC9O60706 1549 aa23.56■■□□□ 1.36
CPT1C-219ENST00000598647 CCDC180Q9P1Z9 1646 aa23.49■■□□□ 1.35
CPT1C-219ENST00000598647 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
CPT1C-219ENST00000598647 DCAF8L2P0C7V8 631 aa22.41■■□□□ 1.18
CPT1C-219ENST00000598647 NACADO15069 1562 aa22.29■■□□□ 1.16
CPT1C-219ENST00000598647 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
CPT1C-219ENST00000598647 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.11
CPT1C-219ENST00000598647 MYO15BQ96JP2 1530 aa21.96■■□□□ 1.11
CPT1C-219ENST00000598647 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
CPT1C-219ENST00000598647 ZCCHC6Q5VYS8 1495 aaKnown RBP21.74■■□□□ 1.07
CPT1C-219ENST00000598647 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
CPT1C-219ENST00000598647 BICRAQ9NZM4 1560 aa21.65■■□□□ 1.06
CPT1C-219ENST00000598647 SHROOM4Q9ULL8 1493 aa21.47■■□□□ 1.03
CPT1C-219ENST00000598647 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
CPT1C-219ENST00000598647 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
CPT1C-219ENST00000598647 CC2D2AQ9P2K1 1620 aa21.23■□□□□ 0.99
CPT1C-219ENST00000598647 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
CPT1C-219ENST00000598647 NCAPD3P42695 1498 aa20.58■□□□□ 0.89
CPT1C-219ENST00000598647 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
CPT1C-219ENST00000598647 SMARCA2P51531 1590 aa20.47■□□□□ 0.87
CPT1C-219ENST00000598647 SMARCA4P51532 1647 aa20.44■□□□□ 0.86
CPT1C-219ENST00000598647 ERCC6Q03468 1493 aa20.42■□□□□ 0.86
CPT1C-219ENST00000598647 BAZ1AQ9NRL2 1556 aaPredicted RBP20.41■□□□□ 0.86
CPT1C-219ENST00000598647 HMGXB3Q12766 1538 aa20.37■□□□□ 0.85
CPT1C-219ENST00000598647 BAZ1BQ9UIG0 1483 aaKnown RBP20.35■□□□□ 0.85
CPT1C-219ENST00000598647 DNAJC5Q9H3Z4 198 aa20.31■□□□□ 0.84
CPT1C-219ENST00000598647 CUX2O14529 1486 aa20.3■□□□□ 0.84
CPT1C-219ENST00000598647 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
CPT1C-219ENST00000598647 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
CPT1C-219ENST00000598647 NESP48681 1621 aa20.2■□□□□ 0.82
CPT1C-219ENST00000598647 LAMC3Q9Y6N6 1575 aa20.09■□□□□ 0.81
CPT1C-219ENST00000598647 PDS5BQ9NTI5 1447 aa20.08■□□□□ 0.8
CPT1C-219ENST00000598647 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
CPT1C-219ENST00000598647 WIZO95785 1651 aa19.95■□□□□ 0.78
CPT1C-219ENST00000598647 THOC2Q8NI27 1593 aaKnown RBP19.91■□□□□ 0.78
CPT1C-219ENST00000598647 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
CPT1C-219ENST00000598647 RSF1Q96T23 1441 aaPredicted RBP19.85■□□□□ 0.77
CPT1C-219ENST00000598647 MRC2Q9UBG0 1479 aa19.82■□□□□ 0.76
CPT1C-219ENST00000598647 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
CPT1C-219ENST00000598647 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
CPT1C-219ENST00000598647 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
CPT1C-219ENST00000598647 CFTRP13569 1480 aa19.73■□□□□ 0.75
CPT1C-219ENST00000598647 WDR62O43379 1518 aa19.71■□□□□ 0.75
CPT1C-219ENST00000598647 CCDC88BA6NC98 1476 aa19.54■□□□□ 0.72
CPT1C-219ENST00000598647 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
CPT1C-219ENST00000598647 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
CPT1C-219ENST00000598647 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
CPT1C-219ENST00000598647 PRDM2Q13029 1718 aa19.41■□□□□ 0.7
CPT1C-219ENST00000598647 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
CPT1C-219ENST00000598647 IFT140Q96RY7 1462 aa19.38■□□□□ 0.69
CPT1C-219ENST00000598647 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
CPT1C-219ENST00000598647 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
CPT1C-219ENST00000598647 DNMBPQ6XZF7 1577 aa19.26■□□□□ 0.67
CPT1C-219ENST00000598647 FBLN2P98095 1184 aa19.18■□□□□ 0.66
CPT1C-219ENST00000598647 AQRO60306 1485 aaKnown RBP eCLIP19.17■□□□□ 0.66
CPT1C-219ENST00000598647 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
CPT1C-219ENST00000598647 SOGA1O94964 1423 aa19.15■□□□□ 0.66
CPT1C-219ENST00000598647 POLA1P09884 1462 aaPredicted RBP19.14■□□□□ 0.65
CPT1C-219ENST00000598647 EIF4G3O43432 1585 aaKnown RBP19.14■□□□□ 0.65
CPT1C-219ENST00000598647 TARBP1Q13395 1621 aaKnown RBP19.11■□□□□ 0.65
CPT1C-219ENST00000598647 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
CPT1C-219ENST00000598647 TDRD9Q8NDG6 1382 aaKnown RBP19.08■□□□□ 0.65
CPT1C-219ENST00000598647 RIMBP3CA6NJZ7 1639 aa19.05■□□□□ 0.64
CPT1C-219ENST00000598647 RIMBP3BA6NNM3 1639 aa19.05■□□□□ 0.64
CPT1C-219ENST00000598647 RIMBP3Q9UFD9 1639 aa19.05■□□□□ 0.64
CPT1C-219ENST00000598647 CYB5RLQ6IPT4 315 aa19.05■□□□□ 0.64
CPT1C-219ENST00000598647 CHMP7Q8WUX9 453 aaPredicted RBP19.04■□□□□ 0.64
CPT1C-219ENST00000598647 FGD5Q6ZNL6 1462 aa19.03■□□□□ 0.64
CPT1C-219ENST00000598647 ARHGEF11O15085 1522 aa19.03■□□□□ 0.64
CPT1C-219ENST00000598647 CUX1P39880 1505 aa18.99■□□□□ 0.63
CPT1C-219ENST00000598647 CHD1O14646 1710 aa18.97■□□□□ 0.63
CPT1C-219ENST00000598647 WDR97A6NE52 1622 aa18.96■□□□□ 0.63
CPT1C-219ENST00000598647 SNAPC4Q5SXM2 1469 aa18.95■□□□□ 0.62
CPT1C-219ENST00000598647 GRIN2BQ13224 1484 aa18.94■□□□□ 0.62
CPT1C-219ENST00000598647 MAGI1Q96QZ7 1491 aaPredicted RBP18.92■□□□□ 0.62
CPT1C-219ENST00000598647 GAPVD1Q14C86 1478 aa18.88■□□□□ 0.61
CPT1C-219ENST00000598647 TRHP20396 242 aaPredicted RBP18.87■□□□□ 0.61
CPT1C-219ENST00000598647 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
CPT1C-219ENST00000598647 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
CPT1C-219ENST00000598647 WRNQ14191 1432 aaPredicted RBP eCLIP18.84■□□□□ 0.61
CPT1C-219ENST00000598647 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.6
CPT1C-219ENST00000598647 ARAP1Q96P48 1450 aa18.83■□□□□ 0.6
CPT1C-219ENST00000598647 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
CPT1C-219ENST00000598647 PBRM1Q86U86 1689 aa18.75■□□□□ 0.59
CPT1C-219ENST00000598647 ABCA5Q8WWZ7 1642 aa18.72■□□□□ 0.59
CPT1C-219ENST00000598647 TOP2BQ02880 1626 aa18.7■□□□□ 0.58
CPT1C-219ENST00000598647 GRIN2AQ12879 1464 aa18.66■□□□□ 0.58
CPT1C-219ENST00000598647 BIVM-ERCC5R4GMW8 1640 aa18.66■□□□□ 0.58
CPT1C-219ENST00000598647 FHAD1B1AJZ9 1412 aa18.66■□□□□ 0.58
CPT1C-219ENST00000598647 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
CPT1C-219ENST00000598647 ERICH3Q5RHP9 1530 aa18.59■□□□□ 0.57
CPT1C-219ENST00000598647 NUP160Q12769 1436 aa18.58■□□□□ 0.57
CPT1C-219ENST00000598647 CEP170Q5SW79 1584 aa18.53■□□□□ 0.56
CPT1C-219ENST00000598647 JPH4Q96JJ6 628 aa18.53■□□□□ 0.56
CPT1C-219ENST00000598647 PRG4Q92954 1404 aaPredicted RBP18.47■□□□□ 0.55
CPT1C-219ENST00000598647 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
CPT1C-219ENST00000598647 KIF27Q86VH2 1401 aa18.46■□□□□ 0.55
CPT1C-219ENST00000598647 NPM1P06748 294 aaKnown RBP eCLIP18.44■□□□□ 0.54
CPT1C-219ENST00000598647 SHROOM2Q13796 1616 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms