RNA–Protein interactions for RNA: ENST00000598316.5

ECH1-210, Transcript of enoyl-CoA hydratase 1, humanhuman

TSL 2

Gene ECH1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1-210ENST00000598316 NISCHQ9Y2I1 1504 aa27.23■■□□□ 1.95
ECH1-210ENST00000598316 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
ECH1-210ENST00000598316 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.25
ECH1-210ENST00000598316 ABCC9O60706 1549 aa22.8■■□□□ 1.24
ECH1-210ENST00000598316 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
ECH1-210ENST00000598316 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
ECH1-210ENST00000598316 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
ECH1-210ENST00000598316 NACADO15069 1562 aa22.35■■□□□ 1.17
ECH1-210ENST00000598316 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
ECH1-210ENST00000598316 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
ECH1-210ENST00000598316 SHROOM4Q9ULL8 1493 aa21.85■■□□□ 1.09
ECH1-210ENST00000598316 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
ECH1-210ENST00000598316 BICRAQ9NZM4 1560 aa21.56■■□□□ 1.04
ECH1-210ENST00000598316 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.01
ECH1-210ENST00000598316 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.98
ECH1-210ENST00000598316 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
ECH1-210ENST00000598316 SMARCA4P51532 1647 aa21.01■□□□□ 0.95
ECH1-210ENST00000598316 MROH2BQ7Z745 1585 aa21■□□□□ 0.95
ECH1-210ENST00000598316 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
ECH1-210ENST00000598316 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
ECH1-210ENST00000598316 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
ECH1-210ENST00000598316 WIZO95785 1651 aa20.81■□□□□ 0.92
ECH1-210ENST00000598316 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
ECH1-210ENST00000598316 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
ECH1-210ENST00000598316 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
ECH1-210ENST00000598316 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
ECH1-210ENST00000598316 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
ECH1-210ENST00000598316 NCAPD3P42695 1498 aa20.61■□□□□ 0.89
ECH1-210ENST00000598316 HMGXB3Q12766 1538 aa20.58■□□□□ 0.89
ECH1-210ENST00000598316 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
ECH1-210ENST00000598316 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
ECH1-210ENST00000598316 DNAJC5BQ9UF47 199 aa20.35■□□□□ 0.85
ECH1-210ENST00000598316 CFTRP13569 1480 aa20.06■□□□□ 0.8
ECH1-210ENST00000598316 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
ECH1-210ENST00000598316 PRDM2Q13029 1718 aa20■□□□□ 0.79
ECH1-210ENST00000598316 LAMC3Q9Y6N6 1575 aa19.97■□□□□ 0.79
ECH1-210ENST00000598316 NESP48681 1621 aa19.93■□□□□ 0.78
ECH1-210ENST00000598316 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
ECH1-210ENST00000598316 ABCC8Q09428 1581 aa19.82■□□□□ 0.76
ECH1-210ENST00000598316 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
ECH1-210ENST00000598316 PDS5BQ9NTI5 1447 aa19.78■□□□□ 0.76
ECH1-210ENST00000598316 WRNQ14191 1432 aaPredicted RBP eCLIP19.75■□□□□ 0.75
ECH1-210ENST00000598316 KIF21AQ7Z4S6 1674 aa19.74■□□□□ 0.75
ECH1-210ENST00000598316 CEP164Q9UPV0 1460 aa19.72■□□□□ 0.75
ECH1-210ENST00000598316 SYNJ1O43426 1573 aa19.7■□□□□ 0.74
ECH1-210ENST00000598316 TOP2BQ02880 1626 aa19.67■□□□□ 0.74
ECH1-210ENST00000598316 BIVM-ERCC5R4GMW8 1640 aa19.67■□□□□ 0.74
ECH1-210ENST00000598316 TRIM41Q8WV44 630 aa19.67■□□□□ 0.74
ECH1-210ENST00000598316 CUX1P39880 1505 aa19.66■□□□□ 0.74
ECH1-210ENST00000598316 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
ECH1-210ENST00000598316 URB2Q14146 1524 aaKnown RBP19.59■□□□□ 0.73
ECH1-210ENST00000598316 ERCC6Q03468 1493 aa19.59■□□□□ 0.73
ECH1-210ENST00000598316 TOPBP1Q92547 1522 aa19.57■□□□□ 0.72
ECH1-210ENST00000598316 MRC2Q9UBG0 1479 aa19.57■□□□□ 0.72
ECH1-210ENST00000598316 THOC2Q8NI27 1593 aaKnown RBP19.52■□□□□ 0.71
ECH1-210ENST00000598316 WDR62O43379 1518 aa19.51■□□□□ 0.71
ECH1-210ENST00000598316 FGD5Q6ZNL6 1462 aa19.49■□□□□ 0.71
ECH1-210ENST00000598316 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
ECH1-210ENST00000598316 SOGA1O94964 1423 aa19.37■□□□□ 0.69
ECH1-210ENST00000598316 WDR97A6NE52 1622 aa19.35■□□□□ 0.69
ECH1-210ENST00000598316 CUX2O14529 1486 aa19.35■□□□□ 0.69
ECH1-210ENST00000598316 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
ECH1-210ENST00000598316 ABCA10Q8WWZ4 1543 aa19.34■□□□□ 0.69
ECH1-210ENST00000598316 EEA1Q15075 1411 aa19.34■□□□□ 0.69
ECH1-210ENST00000598316 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.69
ECH1-210ENST00000598316 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
ECH1-210ENST00000598316 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
ECH1-210ENST00000598316 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
ECH1-210ENST00000598316 FAM9AQ8IZU1 332 aaPredicted RBP19.25■□□□□ 0.67
ECH1-210ENST00000598316 ABCA5Q8WWZ7 1642 aa19.23■□□□□ 0.67
ECH1-210ENST00000598316 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
ECH1-210ENST00000598316 TDRD9Q8NDG6 1382 aaKnown RBP19.17■□□□□ 0.66
ECH1-210ENST00000598316 ZNF608Q9ULD9 1512 aaPredicted RBP19.16■□□□□ 0.66
ECH1-210ENST00000598316 GAPVD1Q14C86 1478 aa19.15■□□□□ 0.66
ECH1-210ENST00000598316 EIF4G3O43432 1585 aaKnown RBP19.13■□□□□ 0.65
ECH1-210ENST00000598316 KIF21BO75037 1637 aa19.12■□□□□ 0.65
ECH1-210ENST00000598316 IGF1RP08069 1367 aa19.12■□□□□ 0.65
ECH1-210ENST00000598316 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
ECH1-210ENST00000598316 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
ECH1-210ENST00000598316 AQRO60306 1485 aaKnown RBP eCLIP19.1■□□□□ 0.657e-9■■■■■ 30.5
ECH1-210ENST00000598316 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
ECH1-210ENST00000598316 CUL7Q14999 1698 aa19.08■□□□□ 0.64
ECH1-210ENST00000598316 GRIN2BQ13224 1484 aa19.07■□□□□ 0.64
ECH1-210ENST00000598316 DNAJC5Q9H3Z4 198 aa19.05■□□□□ 0.64
ECH1-210ENST00000598316 GOLGA3Q08378 1498 aa19.03■□□□□ 0.64
ECH1-210ENST00000598316 LOC105371045A0A1W2PR82 267 aa19.03■□□□□ 0.64
ECH1-210ENST00000598316 RAPGEF2Q9Y4G8 1499 aa19.02■□□□□ 0.63
ECH1-210ENST00000598316 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
ECH1-210ENST00000598316 ADAMTS12P58397 1594 aa18.99■□□□□ 0.63
ECH1-210ENST00000598316 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
ECH1-210ENST00000598316 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.63
ECH1-210ENST00000598316 MAGI1Q96QZ7 1491 aaPredicted RBP18.96■□□□□ 0.63
ECH1-210ENST00000598316 EHMT2Q96KQ7 1210 aa18.93■□□□□ 0.62
ECH1-210ENST00000598316 TNIKQ9UKE5 1360 aa18.9■□□□□ 0.62
ECH1-210ENST00000598316 SYNJ2O15056 1496 aa18.88■□□□□ 0.61
ECH1-210ENST00000598316 UBTFP17480 764 aaKnown RBP18.86■□□□□ 0.61
ECH1-210ENST00000598316 GRIN2AQ12879 1464 aa18.83■□□□□ 0.6
ECH1-210ENST00000598316 CTTNBP2Q8WZ74 1663 aa18.81■□□□□ 0.6
ECH1-210ENST00000598316 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
ECH1-210ENST00000598316 CHD1O14646 1710 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms