RNA–Protein interactions for RNA: ENST00000598271.5

FKRP-216, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-216ENST00000598271 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
FKRP-216ENST00000598271 ABCC9O60706 1549 aa21.23■□□□□ 0.99
FKRP-216ENST00000598271 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
FKRP-216ENST00000598271 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
FKRP-216ENST00000598271 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.81
FKRP-216ENST00000598271 NACADO15069 1562 aa20■□□□□ 0.79
FKRP-216ENST00000598271 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
FKRP-216ENST00000598271 UNC13AQ9UPW8 1703 aa19.78■□□□□ 0.76
FKRP-216ENST00000598271 DNAJC5BQ9UF47 199 aa19.73■□□□□ 0.75
FKRP-216ENST00000598271 MYO15BQ96JP2 1530 aa19.63■□□□□ 0.73
FKRP-216ENST00000598271 ZCCHC6Q5VYS8 1495 aaKnown RBP19.62■□□□□ 0.73
FKRP-216ENST00000598271 BICRAQ9NZM4 1560 aa19.54■□□□□ 0.72
FKRP-216ENST00000598271 SCRIBQ14160 1630 aa19.47■□□□□ 0.71
FKRP-216ENST00000598271 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
FKRP-216ENST00000598271 SHROOM4Q9ULL8 1493 aa19.19■□□□□ 0.66
FKRP-216ENST00000598271 CC2D2AQ9P2K1 1620 aa19.14■□□□□ 0.65
FKRP-216ENST00000598271 EIF4G1Q04637 1599 aaKnown RBP19.09■□□□□ 0.65
FKRP-216ENST00000598271 CECR2Q9BXF3 1484 aa19.06■□□□□ 0.64
FKRP-216ENST00000598271 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
FKRP-216ENST00000598271 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
FKRP-216ENST00000598271 ATAD2BQ9ULI0 1458 aa18.43■□□□□ 0.54
FKRP-216ENST00000598271 NCAPD3P42695 1498 aa18.41■□□□□ 0.54
FKRP-216ENST00000598271 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
FKRP-216ENST00000598271 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
FKRP-216ENST00000598271 ERCC6Q03468 1493 aa18.34■□□□□ 0.53
FKRP-216ENST00000598271 HMGXB3Q12766 1538 aa18.33■□□□□ 0.53
FKRP-216ENST00000598271 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.52
FKRP-216ENST00000598271 MROH2BQ7Z745 1585 aa18.28■□□□□ 0.52
FKRP-216ENST00000598271 NESP48681 1621 aa18.24■□□□□ 0.51
FKRP-216ENST00000598271 CHIC1Q5VXU3 224 aa18.2■□□□□ 0.5
FKRP-216ENST00000598271 PEG3Q9GZU2 1588 aa18.19■□□□□ 0.5
FKRP-216ENST00000598271 CUX2O14529 1486 aa18.15■□□□□ 0.5
FKRP-216ENST00000598271 WIZO95785 1651 aa18.12■□□□□ 0.49
FKRP-216ENST00000598271 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
FKRP-216ENST00000598271 KIF21AQ7Z4S6 1674 aa18.05■□□□□ 0.48
FKRP-216ENST00000598271 DNAJC5Q9H3Z4 198 aa18.01■□□□□ 0.47
FKRP-216ENST00000598271 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
FKRP-216ENST00000598271 PDS5BQ9NTI5 1447 aa17.95■□□□□ 0.46
FKRP-216ENST00000598271 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
FKRP-216ENST00000598271 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
FKRP-216ENST00000598271 TOP2AP11388 1531 aaKnown RBP17.84■□□□□ 0.45
FKRP-216ENST00000598271 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
FKRP-216ENST00000598271 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
FKRP-216ENST00000598271 FANCD2Q9BXW9 1451 aa17.76■□□□□ 0.43
FKRP-216ENST00000598271 WDR62O43379 1518 aa17.74■□□□□ 0.43
FKRP-216ENST00000598271 CFTRP13569 1480 aa17.69■□□□□ 0.42
FKRP-216ENST00000598271 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
FKRP-216ENST00000598271 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
FKRP-216ENST00000598271 URB2Q14146 1524 aaKnown RBP17.6■□□□□ 0.41
FKRP-216ENST00000598271 TRIM41Q8WV44 630 aa17.48■□□□□ 0.39
FKRP-216ENST00000598271 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
FKRP-216ENST00000598271 IFT140Q96RY7 1462 aa17.39■□□□□ 0.37
FKRP-216ENST00000598271 ZNF608Q9ULD9 1512 aaPredicted RBP17.39■□□□□ 0.37
FKRP-216ENST00000598271 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
FKRP-216ENST00000598271 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
FKRP-216ENST00000598271 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
FKRP-216ENST00000598271 EIF4G3O43432 1585 aaKnown RBP17.33■□□□□ 0.37
FKRP-216ENST00000598271 ABCC8Q09428 1581 aa17.33■□□□□ 0.37
FKRP-216ENST00000598271 AQRO60306 1485 aaKnown RBP eCLIP17.25■□□□□ 0.35
FKRP-216ENST00000598271 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
FKRP-216ENST00000598271 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
FKRP-216ENST00000598271 CHD1O14646 1710 aa17.24■□□□□ 0.35
FKRP-216ENST00000598271 FBLN2P98095 1184 aa17.23■□□□□ 0.35
FKRP-216ENST00000598271 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
FKRP-216ENST00000598271 RIMBP3CA6NJZ7 1639 aa17.2■□□□□ 0.34
FKRP-216ENST00000598271 RIMBP3BA6NNM3 1639 aa17.2■□□□□ 0.34
FKRP-216ENST00000598271 RIMBP3Q9UFD9 1639 aa17.2■□□□□ 0.34
FKRP-216ENST00000598271 FGD5Q6ZNL6 1462 aa17.19■□□□□ 0.34
FKRP-216ENST00000598271 SOGA1O94964 1423 aa17.18■□□□□ 0.34
FKRP-216ENST00000598271 CUX1P39880 1505 aa17.16■□□□□ 0.34
FKRP-216ENST00000598271 TDRD9Q8NDG6 1382 aaKnown RBP17.16■□□□□ 0.34
FKRP-216ENST00000598271 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
FKRP-216ENST00000598271 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
FKRP-216ENST00000598271 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
FKRP-216ENST00000598271 WDR97A6NE52 1622 aa17.05■□□□□ 0.32
FKRP-216ENST00000598271 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
FKRP-216ENST00000598271 CYB5RLQ6IPT4 315 aa17.02■□□□□ 0.32
FKRP-216ENST00000598271 GRIN2BQ13224 1484 aa17.01■□□□□ 0.31
FKRP-216ENST00000598271 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
FKRP-216ENST00000598271 MAGI1Q96QZ7 1491 aaPredicted RBP16.99■□□□□ 0.31
FKRP-216ENST00000598271 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
FKRP-216ENST00000598271 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
FKRP-216ENST00000598271 ABCA5Q8WWZ7 1642 aa16.94■□□□□ 0.3
FKRP-216ENST00000598271 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
FKRP-216ENST00000598271 ABCA10Q8WWZ4 1543 aa16.93■□□□□ 0.3
FKRP-216ENST00000598271 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
FKRP-216ENST00000598271 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
FKRP-216ENST00000598271 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
FKRP-216ENST00000598271 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
FKRP-216ENST00000598271 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
FKRP-216ENST00000598271 ADAMTS12P58397 1594 aa16.84■□□□□ 0.29
FKRP-216ENST00000598271 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
FKRP-216ENST00000598271 CEP170Q5SW79 1584 aa16.77■□□□□ 0.27
FKRP-216ENST00000598271 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
FKRP-216ENST00000598271 ERCC6L2Q5T890 1561 aa16.73■□□□□ 0.27
FKRP-216ENST00000598271 ERICH3Q5RHP9 1530 aa16.73■□□□□ 0.27
FKRP-216ENST00000598271 NUP160Q12769 1436 aa16.69■□□□□ 0.26
FKRP-216ENST00000598271 SHROOM2Q13796 1616 aa16.63■□□□□ 0.25
FKRP-216ENST00000598271 PRG4Q92954 1404 aaPredicted RBP16.6■□□□□ 0.25
FKRP-216ENST00000598271 RUSC2Q8N2Y8 1516 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms