RNA–Protein interactions for RNA: ENST00000597765.1

GDF15-204, Transcript of growth differentiation factor 15, humanhuman

TSL 4

Gene GDF15, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-204ENST00000597765 NISCHQ9Y2I1 1504 aa33.63■■■□□ 2.97
GDF15-204ENST00000597765 ABCC9O60706 1549 aa31.13■■■□□ 2.57
GDF15-204ENST00000597765 CCDC180Q9P1Z9 1646 aa30.49■■■□□ 2.47
GDF15-204ENST00000597765 DNAJC5BQ9UF47 199 aa29.81■■■□□ 2.36
GDF15-204ENST00000597765 RB1CC1Q8TDY2 1594 aa29.38■■■□□ 2.29
GDF15-204ENST00000597765 NACADO15069 1562 aa29.01■■■□□ 2.24
GDF15-204ENST00000597765 PABPN1Q86U42 306 aaKnown RBP eCLIP28.88■■■□□ 2.21
GDF15-204ENST00000597765 DCAF8L2P0C7V8 631 aa28.7■■■□□ 2.18
GDF15-204ENST00000597765 UNC13AQ9UPW8 1703 aa28.63■■■□□ 2.17
GDF15-204ENST00000597765 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
GDF15-204ENST00000597765 MYO15BQ96JP2 1530 aa28.4■■■□□ 2.14
GDF15-204ENST00000597765 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
GDF15-204ENST00000597765 SHROOM4Q9ULL8 1493 aa28.13■■■□□ 2.09
GDF15-204ENST00000597765 CC2D2AQ9P2K1 1620 aa28.09■■■□□ 2.09
GDF15-204ENST00000597765 DNAJC5Q9H3Z4 198 aa27.95■■■□□ 2.06
GDF15-204ENST00000597765 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
GDF15-204ENST00000597765 DCAF1Q9Y4B6 1507 aa27.77■■■□□ 2.04
GDF15-204ENST00000597765 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.03
GDF15-204ENST00000597765 SCRIBQ14160 1630 aa27.68■■■□□ 2.02
GDF15-204ENST00000597765 CUX2O14529 1486 aa27.17■■□□□ 1.94
GDF15-204ENST00000597765 ERCC6Q03468 1493 aa26.97■■□□□ 1.91
GDF15-204ENST00000597765 NCAPD3P42695 1498 aa26.79■■□□□ 1.88
GDF15-204ENST00000597765 ATAD2BQ9ULI0 1458 aa26.59■■□□□ 1.85
GDF15-204ENST00000597765 NESP48681 1621 aa26.52■■□□□ 1.84
GDF15-204ENST00000597765 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
GDF15-204ENST00000597765 SMARCA2P51531 1590 aa26.5■■□□□ 1.83
GDF15-204ENST00000597765 TRIM41Q8WV44 630 aa26.4■■□□□ 1.82
GDF15-204ENST00000597765 THOC2Q8NI27 1593 aaKnown RBP26.4■■□□□ 1.82
GDF15-204ENST00000597765 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
GDF15-204ENST00000597765 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
GDF15-204ENST00000597765 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
GDF15-204ENST00000597765 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
GDF15-204ENST00000597765 BAZ1AQ9NRL2 1556 aaPredicted RBP26.16■■□□□ 1.78
GDF15-204ENST00000597765 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
GDF15-204ENST00000597765 PEG3Q9GZU2 1588 aa26.14■■□□□ 1.78
GDF15-204ENST00000597765 MRC2Q9UBG0 1479 aa25.97■■□□□ 1.75
GDF15-204ENST00000597765 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.74
GDF15-204ENST00000597765 WDR62O43379 1518 aa25.91■■□□□ 1.74
GDF15-204ENST00000597765 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
GDF15-204ENST00000597765 OSCARQ8IYS5 282 aa25.84■■□□□ 1.73
GDF15-204ENST00000597765 CEP164Q9UPV0 1460 aa25.73■■□□□ 1.71
GDF15-204ENST00000597765 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
GDF15-204ENST00000597765 WIZO95785 1651 aa25.52■■□□□ 1.68
GDF15-204ENST00000597765 RIMBP3CA6NJZ7 1639 aa25.5■■□□□ 1.67
GDF15-204ENST00000597765 RIMBP3BA6NNM3 1639 aa25.5■■□□□ 1.67
GDF15-204ENST00000597765 RIMBP3Q9UFD9 1639 aa25.5■■□□□ 1.67
GDF15-204ENST00000597765 CFTRP13569 1480 aa25.49■■□□□ 1.67
GDF15-204ENST00000597765 RSF1Q96T23 1441 aaPredicted RBP25.47■■□□□ 1.67
GDF15-204ENST00000597765 URB2Q14146 1524 aaKnown RBP25.44■■□□□ 1.66
GDF15-204ENST00000597765 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
GDF15-204ENST00000597765 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
GDF15-204ENST00000597765 CYB5RLQ6IPT4 315 aa25.25■■□□□ 1.63
GDF15-204ENST00000597765 IFT140Q96RY7 1462 aa25.25■■□□□ 1.63
GDF15-204ENST00000597765 ZNF608Q9ULD9 1512 aaPredicted RBP25.23■■□□□ 1.63
GDF15-204ENST00000597765 TRHP20396 242 aaPredicted RBP25.21■■□□□ 1.63
GDF15-204ENST00000597765 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
GDF15-204ENST00000597765 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
GDF15-204ENST00000597765 TOPBP1Q92547 1522 aa25.06■■□□□ 1.6
GDF15-204ENST00000597765 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
GDF15-204ENST00000597765 ARAP1Q96P48 1450 aa25.05■■□□□ 1.6
GDF15-204ENST00000597765 ABCC8Q09428 1581 aa25.03■■□□□ 1.6
GDF15-204ENST00000597765 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
GDF15-204ENST00000597765 CHD1O14646 1710 aa24.99■■□□□ 1.59
GDF15-204ENST00000597765 FBLN2P98095 1184 aa24.95■■□□□ 1.58
GDF15-204ENST00000597765 AQRO60306 1485 aaKnown RBP eCLIP24.93■■□□□ 1.583e-9■■■■■ 37.1
GDF15-204ENST00000597765 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
GDF15-204ENST00000597765 CCDC88BA6NC98 1476 aa24.9■■□□□ 1.58
GDF15-204ENST00000597765 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
GDF15-204ENST00000597765 POLA1P09884 1462 aaPredicted RBP24.76■■□□□ 1.55
GDF15-204ENST00000597765 CLASP1Q7Z460 1538 aa24.71■■□□□ 1.55
GDF15-204ENST00000597765 TDRD9Q8NDG6 1382 aaKnown RBP24.68■■□□□ 1.54
GDF15-204ENST00000597765 CHMP7Q8WUX9 453 aaPredicted RBP24.67■■□□□ 1.54
GDF15-204ENST00000597765 SOGA1O94964 1423 aa24.67■■□□□ 1.54
GDF15-204ENST00000597765 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
GDF15-204ENST00000597765 RAD54L2Q9Y4B4 1467 aa24.65■■□□□ 1.54
GDF15-204ENST00000597765 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.54
GDF15-204ENST00000597765 WDR97A6NE52 1622 aa24.63■■□□□ 1.53
GDF15-204ENST00000597765 MAGI1Q96QZ7 1491 aaPredicted RBP24.6■■□□□ 1.53
GDF15-204ENST00000597765 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
GDF15-204ENST00000597765 SYNJ2O15056 1496 aa24.52■■□□□ 1.52
GDF15-204ENST00000597765 GAPVD1Q14C86 1478 aa24.52■■□□□ 1.52
GDF15-204ENST00000597765 FGD5Q6ZNL6 1462 aa24.49■■□□□ 1.51
GDF15-204ENST00000597765 CUX1P39880 1505 aa24.35■■□□□ 1.49
GDF15-204ENST00000597765 PBRM1Q86U86 1689 aa24.33■■□□□ 1.49
GDF15-204ENST00000597765 ERCC6L2Q5T890 1561 aa24.24■■□□□ 1.47
GDF15-204ENST00000597765 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.47
GDF15-204ENST00000597765 ABCA5Q8WWZ7 1642 aa24.2■■□□□ 1.46
GDF15-204ENST00000597765 GRIN2AQ12879 1464 aa24.19■■□□□ 1.46
GDF15-204ENST00000597765 CEP170Q5SW79 1584 aa24.18■■□□□ 1.46
GDF15-204ENST00000597765 KIF13AQ9H1H9 1805 aa24.14■■□□□ 1.46
GDF15-204ENST00000597765 NUP160Q12769 1436 aa24.14■■□□□ 1.45
GDF15-204ENST00000597765 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
GDF15-204ENST00000597765 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
GDF15-204ENST00000597765 ADAMTS12P58397 1594 aa24.06■■□□□ 1.44
GDF15-204ENST00000597765 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
GDF15-204ENST00000597765 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
GDF15-204ENST00000597765 FAM69CQ0P6D2 419 aa24■■□□□ 1.43
GDF15-204ENST00000597765 PRG4Q92954 1404 aaPredicted RBP23.98■■□□□ 1.43
GDF15-204ENST00000597765 ABCC10Q5T3U5 1492 aa23.98■■□□□ 1.43
GDF15-204ENST00000597765 NPM1P06748 294 aaKnown RBP eCLIP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms