RNA–Protein interactions for RNA: ENST00000597626.5

LINC00649-209, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 612 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-209ENST00000597626 NISCHQ9Y2I1 1504 aa23.82■■□□□ 1.4
LINC00649-209ENST00000597626 ABCC9O60706 1549 aa21.44■■□□□ 1.02
LINC00649-209ENST00000597626 CCDC180Q9P1Z9 1646 aa21.36■■□□□ 1.01
LINC00649-209ENST00000597626 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
LINC00649-209ENST00000597626 NACADO15069 1562 aa20.25■□□□□ 0.83
LINC00649-209ENST00000597626 DCAF8L2P0C7V8 631 aa20.22■□□□□ 0.83
LINC00649-209ENST00000597626 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
LINC00649-209ENST00000597626 PABPN1Q86U42 306 aaKnown RBP eCLIP19.99■□□□□ 0.79
LINC00649-209ENST00000597626 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
LINC00649-209ENST00000597626 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
LINC00649-209ENST00000597626 BICRAQ9NZM4 1560 aa19.74■□□□□ 0.75
LINC00649-209ENST00000597626 ZCCHC6Q5VYS8 1495 aaKnown RBP19.71■□□□□ 0.75
LINC00649-209ENST00000597626 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
LINC00649-209ENST00000597626 SHROOM4Q9ULL8 1493 aa19.53■□□□□ 0.72
LINC00649-209ENST00000597626 SCRIBQ14160 1630 aa19.46■□□□□ 0.71
LINC00649-209ENST00000597626 CC2D2AQ9P2K1 1620 aa19.34■□□□□ 0.69
LINC00649-209ENST00000597626 CECR2Q9BXF3 1484 aa19.33■□□□□ 0.68
LINC00649-209ENST00000597626 EIF4G1Q04637 1599 aaKnown RBP19.3■□□□□ 0.68
LINC00649-209ENST00000597626 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
LINC00649-209ENST00000597626 ATAD2BQ9ULI0 1458 aa18.63■□□□□ 0.57
LINC00649-209ENST00000597626 DNAJC5Q9H3Z4 198 aa18.59■□□□□ 0.57
LINC00649-209ENST00000597626 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
LINC00649-209ENST00000597626 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
LINC00649-209ENST00000597626 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
LINC00649-209ENST00000597626 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
LINC00649-209ENST00000597626 CUX2O14529 1486 aa18.51■□□□□ 0.55
LINC00649-209ENST00000597626 BAZ1AQ9NRL2 1556 aaPredicted RBP18.5■□□□□ 0.55
LINC00649-209ENST00000597626 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
LINC00649-209ENST00000597626 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
LINC00649-209ENST00000597626 NESP48681 1621 aa18.38■□□□□ 0.53
LINC00649-209ENST00000597626 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
LINC00649-209ENST00000597626 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.52
LINC00649-209ENST00000597626 PDS5BQ9NTI5 1447 aa18.22■□□□□ 0.51
LINC00649-209ENST00000597626 THOC2Q8NI27 1593 aaKnown RBP18.17■□□□□ 0.5
LINC00649-209ENST00000597626 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
LINC00649-209ENST00000597626 KIF21AQ7Z4S6 1674 aa18.11■□□□□ 0.49
LINC00649-209ENST00000597626 WIZO95785 1651 aa18.1■□□□□ 0.49
LINC00649-209ENST00000597626 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
LINC00649-209ENST00000597626 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
LINC00649-209ENST00000597626 WDR62O43379 1518 aa17.95■□□□□ 0.46
LINC00649-209ENST00000597626 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
LINC00649-209ENST00000597626 FANCD2Q9BXW9 1451 aa17.92■□□□□ 0.46
LINC00649-209ENST00000597626 CFTRP13569 1480 aa17.91■□□□□ 0.46
LINC00649-209ENST00000597626 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
LINC00649-209ENST00000597626 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
LINC00649-209ENST00000597626 URB2Q14146 1524 aaKnown RBP17.74■□□□□ 0.43
LINC00649-209ENST00000597626 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
LINC00649-209ENST00000597626 CCDC88BA6NC98 1476 aa17.7■□□□□ 0.42
LINC00649-209ENST00000597626 PRDM2Q13029 1718 aa17.66■□□□□ 0.42
LINC00649-209ENST00000597626 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
LINC00649-209ENST00000597626 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
LINC00649-209ENST00000597626 TOPBP1Q92547 1522 aa17.56■□□□□ 0.4
LINC00649-209ENST00000597626 ZNF608Q9ULD9 1512 aaPredicted RBP17.53■□□□□ 0.4
LINC00649-209ENST00000597626 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
LINC00649-209ENST00000597626 EIF4G3O43432 1585 aaKnown RBP17.41■□□□□ 0.38
LINC00649-209ENST00000597626 AQRO60306 1485 aaKnown RBP eCLIP17.4■□□□□ 0.38
LINC00649-209ENST00000597626 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.38
LINC00649-209ENST00000597626 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.38
LINC00649-209ENST00000597626 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.38
LINC00649-209ENST00000597626 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
LINC00649-209ENST00000597626 TARBP1Q13395 1621 aaKnown RBP17.37■□□□□ 0.37
LINC00649-209ENST00000597626 FBLN2P98095 1184 aa17.36■□□□□ 0.37
LINC00649-209ENST00000597626 ARHGEF11O15085 1522 aa17.36■□□□□ 0.37
LINC00649-209ENST00000597626 SOGA1O94964 1423 aa17.34■□□□□ 0.37
LINC00649-209ENST00000597626 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
LINC00649-209ENST00000597626 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
LINC00649-209ENST00000597626 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
LINC00649-209ENST00000597626 CHD1O14646 1710 aa17.28■□□□□ 0.36
LINC00649-209ENST00000597626 FGD5Q6ZNL6 1462 aa17.26■□□□□ 0.35
LINC00649-209ENST00000597626 WDR97A6NE52 1622 aa17.23■□□□□ 0.35
LINC00649-209ENST00000597626 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
LINC00649-209ENST00000597626 CUX1P39880 1505 aa17.22■□□□□ 0.35
LINC00649-209ENST00000597626 SNAPC4Q5SXM2 1469 aa17.21■□□□□ 0.35
LINC00649-209ENST00000597626 SUPT5HO00267 1087 aaKnown RBP17.2■□□□□ 0.34
LINC00649-209ENST00000597626 GRIN2BQ13224 1484 aa17.18■□□□□ 0.34
LINC00649-209ENST00000597626 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
LINC00649-209ENST00000597626 ARAP1Q96P48 1450 aa17.17■□□□□ 0.34
LINC00649-209ENST00000597626 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
LINC00649-209ENST00000597626 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
LINC00649-209ENST00000597626 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
LINC00649-209ENST00000597626 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
LINC00649-209ENST00000597626 CLASP1Q7Z460 1538 aa17.1■□□□□ 0.33
LINC00649-209ENST00000597626 ABCA10Q8WWZ4 1543 aa17.07■□□□□ 0.32
LINC00649-209ENST00000597626 PBRM1Q86U86 1689 aa17.04■□□□□ 0.32
LINC00649-209ENST00000597626 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.32
LINC00649-209ENST00000597626 ABCA5Q8WWZ7 1642 aa17.01■□□□□ 0.31
LINC00649-209ENST00000597626 GRIN2AQ12879 1464 aa16.94■□□□□ 0.3
LINC00649-209ENST00000597626 TOP2BQ02880 1626 aa16.94■□□□□ 0.3
LINC00649-209ENST00000597626 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
LINC00649-209ENST00000597626 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
LINC00649-209ENST00000597626 ADAMTS12P58397 1594 aa16.89■□□□□ 0.29
LINC00649-209ENST00000597626 NUP160Q12769 1436 aa16.88■□□□□ 0.29
LINC00649-209ENST00000597626 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
LINC00649-209ENST00000597626 CEP170Q5SW79 1584 aa16.85■□□□□ 0.29
LINC00649-209ENST00000597626 ERCC6L2Q5T890 1561 aa16.81■□□□□ 0.28
LINC00649-209ENST00000597626 JPH4Q96JJ6 628 aa16.78■□□□□ 0.28
LINC00649-209ENST00000597626 SHROOM2Q13796 1616 aa16.78■□□□□ 0.28
LINC00649-209ENST00000597626 PRG4Q92954 1404 aaPredicted RBP16.75■□□□□ 0.27
LINC00649-209ENST00000597626 AEBP2Q6ZN18 517 aaPredicted RBP16.7■□□□□ 0.26
LINC00649-209ENST00000597626 NPM1P06748 294 aaKnown RBP eCLIP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms