RNA–Protein interactions for RNA: ENST00000597442.5

C3-209, Transcript of complement C3, humanhuman

TSL 3

Gene C3, Length 469 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3-209ENST00000597442 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
C3-209ENST00000597442 ABCC9O60706 1549 aa26.58■■□□□ 1.85
C3-209ENST00000597442 CCDC180Q9P1Z9 1646 aa26.52■■□□□ 1.84
C3-209ENST00000597442 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
C3-209ENST00000597442 NACADO15069 1562 aa25.01■■□□□ 1.59
C3-209ENST00000597442 DNAJC5BQ9UF47 199 aa24.99■■□□□ 1.59
C3-209ENST00000597442 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
C3-209ENST00000597442 DCAF8L2P0C7V8 631 aa24.77■■□□□ 1.56
C3-209ENST00000597442 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
C3-209ENST00000597442 PABPN1Q86U42 306 aaKnown RBP eCLIP24.65■■□□□ 1.54
C3-209ENST00000597442 BICRAQ9NZM4 1560 aa24.57■■□□□ 1.52
C3-209ENST00000597442 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
C3-209ENST00000597442 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
C3-209ENST00000597442 SCRIBQ14160 1630 aa24.16■■□□□ 1.46
C3-209ENST00000597442 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
C3-209ENST00000597442 CC2D2AQ9P2K1 1620 aa24.04■■□□□ 1.44
C3-209ENST00000597442 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.42
C3-209ENST00000597442 CECR2Q9BXF3 1484 aa23.92■■□□□ 1.42
C3-209ENST00000597442 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
C3-209ENST00000597442 SMARCA4P51532 1647 aa23.02■■□□□ 1.28
C3-209ENST00000597442 ATAD2BQ9ULI0 1458 aa23■■□□□ 1.27
C3-209ENST00000597442 DNAJC5Q9H3Z4 198 aa22.97■■□□□ 1.27
C3-209ENST00000597442 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
C3-209ENST00000597442 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
C3-209ENST00000597442 CUX2O14529 1486 aa22.92■■□□□ 1.26
C3-209ENST00000597442 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
C3-209ENST00000597442 ERCC6Q03468 1493 aa22.92■■□□□ 1.26
C3-209ENST00000597442 NESP48681 1621 aa22.82■■□□□ 1.24
C3-209ENST00000597442 BAZ1BQ9UIG0 1483 aaKnown RBP22.77■■□□□ 1.24
C3-209ENST00000597442 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
C3-209ENST00000597442 MROH2BQ7Z745 1585 aa22.75■■□□□ 1.23
C3-209ENST00000597442 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
C3-209ENST00000597442 KIF21AQ7Z4S6 1674 aa22.62■■□□□ 1.21
C3-209ENST00000597442 LAMC3Q9Y6N6 1575 aa22.62■■□□□ 1.21
C3-209ENST00000597442 WIZO95785 1651 aa22.46■■□□□ 1.19
C3-209ENST00000597442 RSF1Q96T23 1441 aaPredicted RBP22.43■■□□□ 1.18
C3-209ENST00000597442 PDS5BQ9NTI5 1447 aa22.4■■□□□ 1.18
C3-209ENST00000597442 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
C3-209ENST00000597442 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
C3-209ENST00000597442 WDR62O43379 1518 aa22.27■■□□□ 1.16
C3-209ENST00000597442 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
C3-209ENST00000597442 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
C3-209ENST00000597442 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
C3-209ENST00000597442 CFTRP13569 1480 aa22.08■■□□□ 1.12
C3-209ENST00000597442 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
C3-209ENST00000597442 URB2Q14146 1524 aaKnown RBP22■■□□□ 1.11
C3-209ENST00000597442 CCDC88BA6NC98 1476 aa21.99■■□□□ 1.11
C3-209ENST00000597442 TRIM41Q8WV44 630 aa21.95■■□□□ 1.1
C3-209ENST00000597442 SUPT5HO00267 1087 aaKnown RBP21.94■■□□□ 1.1
C3-209ENST00000597442 OSCARQ8IYS5 282 aa21.74■■□□□ 1.07
C3-209ENST00000597442 ZNF608Q9ULD9 1512 aaPredicted RBP21.74■■□□□ 1.07
C3-209ENST00000597442 TOPBP1Q92547 1522 aa21.72■■□□□ 1.07
C3-209ENST00000597442 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
C3-209ENST00000597442 RIMBP3CA6NJZ7 1639 aa21.69■■□□□ 1.06
C3-209ENST00000597442 RIMBP3BA6NNM3 1639 aa21.69■■□□□ 1.06
C3-209ENST00000597442 RIMBP3Q9UFD9 1639 aa21.69■■□□□ 1.06
C3-209ENST00000597442 EIF4G3O43432 1585 aaKnown RBP21.68■■□□□ 1.06
C3-209ENST00000597442 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
C3-209ENST00000597442 ABCC8Q09428 1581 aa21.64■■□□□ 1.05
C3-209ENST00000597442 CHD1O14646 1710 aa21.59■■□□□ 1.05
C3-209ENST00000597442 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.05
C3-209ENST00000597442 ARHGEF11O15085 1522 aa21.55■■□□□ 1.04
C3-209ENST00000597442 POLA1P09884 1462 aaPredicted RBP21.49■■□□□ 1.03
C3-209ENST00000597442 AQRO60306 1485 aaKnown RBP eCLIP21.48■■□□□ 1.037e-12■■■■■ 43.7
C3-209ENST00000597442 RAD54L2Q9Y4B4 1467 aa21.41■■□□□ 1.02
C3-209ENST00000597442 CUX1P39880 1505 aa21.35■■□□□ 1.01
C3-209ENST00000597442 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
C3-209ENST00000597442 ARAP1Q96P48 1450 aa21.34■■□□□ 1.01
C3-209ENST00000597442 SOGA1O94964 1423 aa21.34■■□□□ 1.01
C3-209ENST00000597442 WDR97A6NE52 1622 aa21.31■■□□□ 1
C3-209ENST00000597442 TDRD9Q8NDG6 1382 aaKnown RBP21.3■■□□□ 1
C3-209ENST00000597442 SNAPC4Q5SXM2 1469 aa21.3■■□□□ 1
C3-209ENST00000597442 FBLN2P98095 1184 aa21.29■■□□□ 1
C3-209ENST00000597442 CYB5RLQ6IPT4 315 aa21.28■■□□□ 1
C3-209ENST00000597442 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
C3-209ENST00000597442 PBRM1Q86U86 1689 aa21.25■□□□□ 0.99
C3-209ENST00000597442 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
C3-209ENST00000597442 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
C3-209ENST00000597442 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
C3-209ENST00000597442 WRNQ14191 1432 aaPredicted RBP eCLIP21.17■□□□□ 0.98
C3-209ENST00000597442 CHIC1Q5VXU3 224 aa21.14■□□□□ 0.97
C3-209ENST00000597442 ABCA5Q8WWZ7 1642 aa21.13■□□□□ 0.97
C3-209ENST00000597442 ABCA10Q8WWZ4 1543 aa21.13■□□□□ 0.97
C3-209ENST00000597442 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
C3-209ENST00000597442 TOP2BQ02880 1626 aa21.12■□□□□ 0.97
C3-209ENST00000597442 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
C3-209ENST00000597442 BIVM-ERCC5R4GMW8 1640 aa21.1■□□□□ 0.97
C3-209ENST00000597442 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
C3-209ENST00000597442 TRHP20396 242 aaPredicted RBP21.07■□□□□ 0.96
C3-209ENST00000597442 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
C3-209ENST00000597442 ERCC6L2Q5T890 1561 aa20.95■□□□□ 0.94
C3-209ENST00000597442 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
C3-209ENST00000597442 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
C3-209ENST00000597442 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
C3-209ENST00000597442 NUP160Q12769 1436 aa20.86■□□□□ 0.93
C3-209ENST00000597442 SHROOM2Q13796 1616 aa20.86■□□□□ 0.93
C3-209ENST00000597442 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
C3-209ENST00000597442 KIF27Q86VH2 1401 aa20.76■□□□□ 0.91
C3-209ENST00000597442 KIF13AQ9H1H9 1805 aa20.71■□□□□ 0.91
C3-209ENST00000597442 RUSC2Q8N2Y8 1516 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms