RNA–Protein interactions for RNA: ENST00000597365.1

PAF1-206, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-206ENST00000597365 NISCHQ9Y2I1 1504 aa35.88■■■■□ 3.33
PAF1-206ENST00000597365 CCDC180Q9P1Z9 1646 aa31.86■■■□□ 2.69
PAF1-206ENST00000597365 ABCC9O60706 1549 aa31.14■■■□□ 2.58
PAF1-206ENST00000597365 DCAF8L2P0C7V8 631 aa29.98■■■□□ 2.39
PAF1-206ENST00000597365 RB1CC1Q8TDY2 1594 aa29.95■■■□□ 2.39
PAF1-206ENST00000597365 NACADO15069 1562 aa29.92■■■□□ 2.38
PAF1-206ENST00000597365 ZCCHC6Q5VYS8 1495 aaKnown RBP29.9■■■□□ 2.38
PAF1-206ENST00000597365 MYO15BQ96JP2 1530 aa29.74■■■□□ 2.35
PAF1-206ENST00000597365 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
PAF1-206ENST00000597365 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
PAF1-206ENST00000597365 PABPN1Q86U42 306 aaKnown RBP eCLIP29.12■■■□□ 2.25
PAF1-206ENST00000597365 SCRIBQ14160 1630 aa29.12■■■□□ 2.25
PAF1-206ENST00000597365 BICRAQ9NZM4 1560 aa29.07■■■□□ 2.24
PAF1-206ENST00000597365 DNAJC5BQ9UF47 199 aa28.74■■■□□ 2.19
PAF1-206ENST00000597365 SHROOM4Q9ULL8 1493 aa28.69■■■□□ 2.18
PAF1-206ENST00000597365 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
PAF1-206ENST00000597365 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
PAF1-206ENST00000597365 CECR2Q9BXF3 1484 aa27.98■■■□□ 2.07
PAF1-206ENST00000597365 SMARCA4P51532 1647 aa27.84■■■□□ 2.05
PAF1-206ENST00000597365 BAZ1AQ9NRL2 1556 aaPredicted RBP27.79■■■□□ 2.04
PAF1-206ENST00000597365 MROH2BQ7Z745 1585 aa27.67■■■□□ 2.02
PAF1-206ENST00000597365 ATAD2BQ9ULI0 1458 aa27.66■■■□□ 2.02
PAF1-206ENST00000597365 NCAPD3P42695 1498 aa27.61■■■□□ 2.01
PAF1-206ENST00000597365 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
PAF1-206ENST00000597365 PEG3Q9GZU2 1588 aa27.54■■■□□ 2
PAF1-206ENST00000597365 HMGXB3Q12766 1538 aa27.48■■□□□ 1.99
PAF1-206ENST00000597365 BAZ1BQ9UIG0 1483 aaKnown RBP27.43■■□□□ 1.98
PAF1-206ENST00000597365 WIZO95785 1651 aa27.4■■□□□ 1.98
PAF1-206ENST00000597365 RSF1Q96T23 1441 aaPredicted RBP27.36■■□□□ 1.97
PAF1-206ENST00000597365 TOP2AP11388 1531 aaKnown RBP27.07■■□□□ 1.92
PAF1-206ENST00000597365 NESP48681 1621 aa26.98■■□□□ 1.91
PAF1-206ENST00000597365 LAMC3Q9Y6N6 1575 aa26.88■■□□□ 1.89
PAF1-206ENST00000597365 CADPSQ9ULU8 1353 aa26.82■■□□□ 1.88
PAF1-206ENST00000597365 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
PAF1-206ENST00000597365 CCDC88BA6NC98 1476 aa26.77■■□□□ 1.88
PAF1-206ENST00000597365 SUPT5HO00267 1087 aaKnown RBP26.76■■□□□ 1.87
PAF1-206ENST00000597365 PDS5BQ9NTI5 1447 aa26.68■■□□□ 1.86
PAF1-206ENST00000597365 KIF21AQ7Z4S6 1674 aa26.67■■□□□ 1.86
PAF1-206ENST00000597365 CFTRP13569 1480 aa26.67■■□□□ 1.86
PAF1-206ENST00000597365 DNAJC5Q9H3Z4 198 aa26.63■■□□□ 1.85
PAF1-206ENST00000597365 THOC2Q8NI27 1593 aaKnown RBP26.54■■□□□ 1.84
PAF1-206ENST00000597365 PRDM2Q13029 1718 aa26.52■■□□□ 1.84
PAF1-206ENST00000597365 FANCD2Q9BXW9 1451 aa26.52■■□□□ 1.84
PAF1-206ENST00000597365 CUX2O14529 1486 aa26.49■■□□□ 1.83
PAF1-206ENST00000597365 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
PAF1-206ENST00000597365 MRC2Q9UBG0 1479 aa26.42■■□□□ 1.82
PAF1-206ENST00000597365 WDR62O43379 1518 aa26.34■■□□□ 1.81
PAF1-206ENST00000597365 URB2Q14146 1524 aaKnown RBP26.27■■□□□ 1.8
PAF1-206ENST00000597365 TOPBP1Q92547 1522 aa26.12■■□□□ 1.77
PAF1-206ENST00000597365 DNMBPQ6XZF7 1577 aa26.08■■□□□ 1.77
PAF1-206ENST00000597365 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
PAF1-206ENST00000597365 CUX1P39880 1505 aa25.95■■□□□ 1.74
PAF1-206ENST00000597365 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
PAF1-206ENST00000597365 POLA1P09884 1462 aaPredicted RBP25.9■■□□□ 1.74
PAF1-206ENST00000597365 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
PAF1-206ENST00000597365 TARBP1Q13395 1621 aaKnown RBP25.83■■□□□ 1.73
PAF1-206ENST00000597365 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.72
PAF1-206ENST00000597365 RAD54L2Q9Y4B4 1467 aa25.81■■□□□ 1.72
PAF1-206ENST00000597365 WRNQ14191 1432 aaPredicted RBP eCLIP25.8■■□□□ 1.72
PAF1-206ENST00000597365 SOGA1O94964 1423 aa25.79■■□□□ 1.72
PAF1-206ENST00000597365 SYNJ1O43426 1573 aa25.76■■□□□ 1.71
PAF1-206ENST00000597365 BIVM-ERCC5R4GMW8 1640 aa25.74■■□□□ 1.71
PAF1-206ENST00000597365 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
PAF1-206ENST00000597365 EIF4G3O43432 1585 aaKnown RBP25.72■■□□□ 1.71
PAF1-206ENST00000597365 AQRO60306 1485 aaKnown RBP eCLIP25.69■■□□□ 1.72e-8■■■■■ 39.4
PAF1-206ENST00000597365 TDRD9Q8NDG6 1382 aaKnown RBP25.65■■□□□ 1.7
PAF1-206ENST00000597365 WDR97A6NE52 1622 aa25.64■■□□□ 1.7
PAF1-206ENST00000597365 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.69
PAF1-206ENST00000597365 ABCA5Q8WWZ7 1642 aa25.49■■□□□ 1.67
PAF1-206ENST00000597365 GAPVD1Q14C86 1478 aa25.48■■□□□ 1.67
PAF1-206ENST00000597365 GRIN2BQ13224 1484 aa25.47■■□□□ 1.67
PAF1-206ENST00000597365 PBRM1Q86U86 1689 aa25.46■■□□□ 1.67
PAF1-206ENST00000597365 SNAPC4Q5SXM2 1469 aa25.44■■□□□ 1.66
PAF1-206ENST00000597365 CHD1O14646 1710 aa25.41■■□□□ 1.66
PAF1-206ENST00000597365 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
PAF1-206ENST00000597365 OSCARQ8IYS5 282 aa25.4■■□□□ 1.66
PAF1-206ENST00000597365 MAGI1Q96QZ7 1491 aaPredicted RBP25.38■■□□□ 1.65
PAF1-206ENST00000597365 FBLN2P98095 1184 aa25.36■■□□□ 1.65
PAF1-206ENST00000597365 SYNJ2O15056 1496 aa25.29■■□□□ 1.64
PAF1-206ENST00000597365 CHMP7Q8WUX9 453 aaPredicted RBP25.28■■□□□ 1.64
PAF1-206ENST00000597365 ERICH3Q5RHP9 1530 aa25.27■■□□□ 1.64
PAF1-206ENST00000597365 ADAMTS12P58397 1594 aa25.25■■□□□ 1.63
PAF1-206ENST00000597365 KIF27Q86VH2 1401 aa25.23■■□□□ 1.63
PAF1-206ENST00000597365 FHAD1B1AJZ9 1412 aa25.19■■□□□ 1.62
PAF1-206ENST00000597365 IGF1RP08069 1367 aa25.15■■□□□ 1.62
PAF1-206ENST00000597365 GRIN2AQ12879 1464 aa25.15■■□□□ 1.62
PAF1-206ENST00000597365 CLASP1Q7Z460 1538 aa25.11■■□□□ 1.61
PAF1-206ENST00000597365 RUSC2Q8N2Y8 1516 aa25.1■■□□□ 1.61
PAF1-206ENST00000597365 CUL7Q14999 1698 aa25.07■■□□□ 1.6
PAF1-206ENST00000597365 CEP170Q5SW79 1584 aa25.05■■□□□ 1.6
PAF1-206ENST00000597365 RIMBP3CA6NJZ7 1639 aa25.03■■□□□ 1.6
PAF1-206ENST00000597365 RIMBP3BA6NNM3 1639 aa25.03■■□□□ 1.6
PAF1-206ENST00000597365 RIMBP3Q9UFD9 1639 aa25.03■■□□□ 1.6
PAF1-206ENST00000597365 NUP160Q12769 1436 aa25.03■■□□□ 1.6
PAF1-206ENST00000597365 ARHGEF11O15085 1522 aa25.02■■□□□ 1.6
PAF1-206ENST00000597365 CHIC1Q5VXU3 224 aa25.01■■□□□ 1.59
PAF1-206ENST00000597365 CARMIL1Q5VZK9 1371 aa24.99■■□□□ 1.59
PAF1-206ENST00000597365 RAPGEF2Q9Y4G8 1499 aa24.85■■□□□ 1.57
PAF1-206ENST00000597365 SHROOM2Q13796 1616 aa24.84■■□□□ 1.57
PAF1-206ENST00000597365 ARAP1Q96P48 1450 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms