RNA–Protein interactions for RNA: ENST00000597316.1

TRPM4-208, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 3

Gene TRPM4, Length 780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-208ENST00000597316 NISCHQ9Y2I1 1504 aa44.14■■■■■ 4.66
TRPM4-208ENST00000597316 ABCC9O60706 1549 aa40.1■■■■■ 4.01
TRPM4-208ENST00000597316 CCDC180Q9P1Z9 1646 aa39.62■■■■□ 3.93
TRPM4-208ENST00000597316 DNAJC5BQ9UF47 199 aa37.98■■■■□ 3.67
TRPM4-208ENST00000597316 RB1CC1Q8TDY2 1594 aa37.97■■■■□ 3.67
TRPM4-208ENST00000597316 NACADO15069 1562 aa37.65■■■■□ 3.62
TRPM4-208ENST00000597316 DCAF8L2P0C7V8 631 aa37.6■■■■□ 3.61
TRPM4-208ENST00000597316 PABPN1Q86U42 306 aaKnown RBP eCLIP37.37■■■■□ 3.57
TRPM4-208ENST00000597316 MYO15BQ96JP2 1530 aa37.04■■■■□ 3.52
TRPM4-208ENST00000597316 UNC13AQ9UPW8 1703 aa36.91■■■■□ 3.5
TRPM4-208ENST00000597316 BICRAQ9NZM4 1560 aa36.83■■■■□ 3.49
TRPM4-208ENST00000597316 ZCCHC6Q5VYS8 1495 aaKnown RBP36.47■■■■□ 3.43
TRPM4-208ENST00000597316 DCAF1Q9Y4B6 1507 aa36.42■■■■□ 3.42
TRPM4-208ENST00000597316 SHROOM4Q9ULL8 1493 aa36.36■■■■□ 3.41
TRPM4-208ENST00000597316 CECR2Q9BXF3 1484 aa36.17■■■■□ 3.38
TRPM4-208ENST00000597316 SCRIBQ14160 1630 aa36.13■■■■□ 3.37
TRPM4-208ENST00000597316 CC2D2AQ9P2K1 1620 aa36.13■■■■□ 3.37
TRPM4-208ENST00000597316 EIF4G1Q04637 1599 aaKnown RBP35.99■■■■□ 3.35
TRPM4-208ENST00000597316 DNAJC5Q9H3Z4 198 aa35.16■■■■□ 3.22
TRPM4-208ENST00000597316 NCAPD3P42695 1498 aa34.82■■■■□ 3.16
TRPM4-208ENST00000597316 CUX2O14529 1486 aa34.69■■■■□ 3.14
TRPM4-208ENST00000597316 ERCC6Q03468 1493 aa34.67■■■■□ 3.14
TRPM4-208ENST00000597316 ATAD2BQ9ULI0 1458 aa34.65■■■■□ 3.14
TRPM4-208ENST00000597316 SMARCA2P51531 1590 aa34.5■■■■□ 3.11
TRPM4-208ENST00000597316 HMGXB3Q12766 1538 aa34.44■■■■□ 3.1
TRPM4-208ENST00000597316 SMARCA4P51532 1647 aa34.43■■■■□ 3.1
TRPM4-208ENST00000597316 NESP48681 1621 aa34.32■■■■□ 3.08
TRPM4-208ENST00000597316 BAZ1BQ9UIG0 1483 aaKnown RBP34.28■■■■□ 3.08
TRPM4-208ENST00000597316 BAZ1AQ9NRL2 1556 aaPredicted RBP34.27■■■■□ 3.08
TRPM4-208ENST00000597316 PEG3Q9GZU2 1588 aa34.12■■■■□ 3.05
TRPM4-208ENST00000597316 LAMC3Q9Y6N6 1575 aa34.01■■■■□ 3.03
TRPM4-208ENST00000597316 MROH2BQ7Z745 1585 aa33.99■■■■□ 3.03
TRPM4-208ENST00000597316 THOC2Q8NI27 1593 aaKnown RBP33.94■■■■□ 3.02
TRPM4-208ENST00000597316 PDS5BQ9NTI5 1447 aa33.94■■■■□ 3.02
TRPM4-208ENST00000597316 CADPSQ9ULU8 1353 aa33.78■■■■□ 3
TRPM4-208ENST00000597316 KIF21AQ7Z4S6 1674 aa33.74■■■□□ 2.99
TRPM4-208ENST00000597316 MRC2Q9UBG0 1479 aa33.59■■■□□ 2.97
TRPM4-208ENST00000597316 WIZO95785 1651 aa33.5■■■□□ 2.95
TRPM4-208ENST00000597316 TRIM41Q8WV44 630 aa33.49■■■□□ 2.95
TRPM4-208ENST00000597316 WDR62O43379 1518 aa33.47■■■□□ 2.95
TRPM4-208ENST00000597316 CEP164Q9UPV0 1460 aa33.39■■■□□ 2.94
TRPM4-208ENST00000597316 FANCD2Q9BXW9 1451 aa33.35■■■□□ 2.93
TRPM4-208ENST00000597316 CFTRP13569 1480 aa33.28■■■□□ 2.92
TRPM4-208ENST00000597316 RSF1Q96T23 1441 aaPredicted RBP33.22■■■□□ 2.91
TRPM4-208ENST00000597316 OSCARQ8IYS5 282 aa33.19■■■□□ 2.9
TRPM4-208ENST00000597316 TOP2AP11388 1531 aaKnown RBP33.1■■■□□ 2.89
TRPM4-208ENST00000597316 URB2Q14146 1524 aaKnown RBP33.05■■■□□ 2.88
TRPM4-208ENST00000597316 CCDC88BA6NC98 1476 aa32.8■■■□□ 2.84
TRPM4-208ENST00000597316 IFT140Q96RY7 1462 aa32.76■■■□□ 2.84
TRPM4-208ENST00000597316 ZNF608Q9ULD9 1512 aaPredicted RBP32.72■■■□□ 2.83
TRPM4-208ENST00000597316 PRDM2Q13029 1718 aa32.66■■■□□ 2.82
TRPM4-208ENST00000597316 TOPBP1Q92547 1522 aa32.65■■■□□ 2.82
TRPM4-208ENST00000597316 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
TRPM4-208ENST00000597316 RIMBP3CA6NJZ7 1639 aa32.58■■■□□ 2.81
TRPM4-208ENST00000597316 RIMBP3BA6NNM3 1639 aa32.58■■■□□ 2.81
TRPM4-208ENST00000597316 RIMBP3Q9UFD9 1639 aa32.58■■■□□ 2.81
TRPM4-208ENST00000597316 ARHGEF11O15085 1522 aa32.5■■■□□ 2.79
TRPM4-208ENST00000597316 DNMBPQ6XZF7 1577 aa32.46■■■□□ 2.79
TRPM4-208ENST00000597316 CYB5RLQ6IPT4 315 aa32.44■■■□□ 2.78
TRPM4-208ENST00000597316 EIF4G3O43432 1585 aaKnown RBP32.43■■■□□ 2.78
TRPM4-208ENST00000597316 AQRO60306 1485 aaKnown RBP eCLIP32.42■■■□□ 2.784e-7■■■■□ 25.1
TRPM4-208ENST00000597316 FBLN2P98095 1184 aa32.38■■■□□ 2.77
TRPM4-208ENST00000597316 TARBP1Q13395 1621 aaKnown RBP32.32■■■□□ 2.76
TRPM4-208ENST00000597316 POLA1P09884 1462 aaPredicted RBP32.3■■■□□ 2.76
TRPM4-208ENST00000597316 SOGA1O94964 1423 aa32.23■■■□□ 2.75
TRPM4-208ENST00000597316 TDRD9Q8NDG6 1382 aaKnown RBP32.21■■■□□ 2.75
TRPM4-208ENST00000597316 RAD54L2Q9Y4B4 1467 aa32.21■■■□□ 2.75
TRPM4-208ENST00000597316 TRHP20396 242 aaPredicted RBP32.2■■■□□ 2.75
TRPM4-208ENST00000597316 CHD1O14646 1710 aa32.19■■■□□ 2.74
TRPM4-208ENST00000597316 ARAP1Q96P48 1450 aa32.16■■■□□ 2.74
TRPM4-208ENST00000597316 CHMP7Q8WUX9 453 aaPredicted RBP32.09■■■□□ 2.73
TRPM4-208ENST00000597316 FGD5Q6ZNL6 1462 aa32.04■■■□□ 2.72
TRPM4-208ENST00000597316 SNAPC4Q5SXM2 1469 aa32.03■■■□□ 2.72
TRPM4-208ENST00000597316 WDR97A6NE52 1622 aa31.98■■■□□ 2.71
TRPM4-208ENST00000597316 MAGI1Q96QZ7 1491 aaPredicted RBP31.95■■■□□ 2.7
TRPM4-208ENST00000597316 GRIN2BQ13224 1484 aa31.94■■■□□ 2.7
TRPM4-208ENST00000597316 CUX1P39880 1505 aa31.94■■■□□ 2.7
TRPM4-208ENST00000597316 CLASP1Q7Z460 1538 aa31.9■■■□□ 2.7
TRPM4-208ENST00000597316 SYNJ1O43426 1573 aa31.9■■■□□ 2.7
TRPM4-208ENST00000597316 SYNJ2O15056 1496 aa31.86■■■□□ 2.69
TRPM4-208ENST00000597316 GAPVD1Q14C86 1478 aa31.78■■■□□ 2.68
TRPM4-208ENST00000597316 ABCA10Q8WWZ4 1543 aa31.67■■■□□ 2.66
TRPM4-208ENST00000597316 SUPT5HO00267 1087 aaKnown RBP31.61■■■□□ 2.65
TRPM4-208ENST00000597316 PBRM1Q86U86 1689 aa31.6■■■□□ 2.65
TRPM4-208ENST00000597316 ABCA5Q8WWZ7 1642 aa31.57■■■□□ 2.64
TRPM4-208ENST00000597316 WRNQ14191 1432 aaPredicted RBP eCLIP31.56■■■□□ 2.64
TRPM4-208ENST00000597316 AEBP2Q6ZN18 517 aaPredicted RBP31.52■■■□□ 2.64
TRPM4-208ENST00000597316 GRIN2AQ12879 1464 aa31.5■■■□□ 2.63
TRPM4-208ENST00000597316 NUP160Q12769 1436 aa31.41■■■□□ 2.62
TRPM4-208ENST00000597316 FHAD1B1AJZ9 1412 aa31.39■■■□□ 2.62
TRPM4-208ENST00000597316 ERCC6L2Q5T890 1561 aa31.39■■■□□ 2.61
TRPM4-208ENST00000597316 ADAMTS12P58397 1594 aa31.35■■■□□ 2.61
TRPM4-208ENST00000597316 CEP170Q5SW79 1584 aa31.34■■■□□ 2.61
TRPM4-208ENST00000597316 TOP2BQ02880 1626 aa31.31■■■□□ 2.6
TRPM4-208ENST00000597316 BIVM-ERCC5R4GMW8 1640 aa31.27■■■□□ 2.6
TRPM4-208ENST00000597316 ERICH3Q5RHP9 1530 aa31.26■■■□□ 2.59
TRPM4-208ENST00000597316 JPH4Q96JJ6 628 aa31.22■■■□□ 2.59
TRPM4-208ENST00000597316 SHROOM2Q13796 1616 aa31.22■■■□□ 2.59
TRPM4-208ENST00000597316 PRG4Q92954 1404 aaPredicted RBP31.19■■■□□ 2.58
TRPM4-208ENST00000597316 NPM1P06748 294 aaKnown RBP eCLIP31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms