RNA–Protein interactions for RNA: ENST00000596873.1

RPS11-203, Transcript of ribosomal protein S11, humanhuman

TSL 2 BASIC

Gene RPS11, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-203ENST00000596873 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
RPS11-203ENST00000596873 AEBP2Q6ZN18 517 aaPredicted RBP18.16■□□□□ 0.5
RPS11-203ENST00000596873 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
RPS11-203ENST00000596873 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
RPS11-203ENST00000596873 ABCC9O60706 1549 aa16.62■□□□□ 0.25
RPS11-203ENST00000596873 RB1CC1Q8TDY2 1594 aa15.87■□□□□ 0.13
RPS11-203ENST00000596873 NACADO15069 1562 aa15.77■□□□□ 0.11
RPS11-203ENST00000596873 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
RPS11-203ENST00000596873 UNC13AQ9UPW8 1703 aa15.67■□□□□ 0.1
RPS11-203ENST00000596873 SENP3Q9H4L4 574 aaPredicted RBP15.61■□□□□ 0.09
RPS11-203ENST00000596873 MYO15BQ96JP2 1530 aa15.58■□□□□ 0.08
RPS11-203ENST00000596873 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
RPS11-203ENST00000596873 ZCCHC6Q5VYS8 1495 aaKnown RBP15.47■□□□□ 0.07
RPS11-203ENST00000596873 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.07
RPS11-203ENST00000596873 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
RPS11-203ENST00000596873 DCAF1Q9Y4B6 1507 aa15.4■□□□□ 0.06
RPS11-203ENST00000596873 PHF23Q9BUL5 403 aaPredicted RBP15.37■□□□□ 0.05
RPS11-203ENST00000596873 SCRIBQ14160 1630 aa15.25■□□□□ 0.03
RPS11-203ENST00000596873 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.03
RPS11-203ENST00000596873 CC2D2AQ9P2K1 1620 aa15.07■□□□□ 0
RPS11-203ENST00000596873 EIF4G1Q04637 1599 aaKnown RBP15.05■□□□□ -0
RPS11-203ENST00000596873 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
RPS11-203ENST00000596873 SMARCA4P51532 1647 aa14.57□□□□□ -0.08
RPS11-203ENST00000596873 DNAJC5Q9H3Z4 198 aa14.55□□□□□ -0.08
RPS11-203ENST00000596873 NCAPD3P42695 1498 aa14.52□□□□□ -0.08
RPS11-203ENST00000596873 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
RPS11-203ENST00000596873 FOXD1Q16676 465 aa14.5□□□□□ -0.09
RPS11-203ENST00000596873 HMGXB3Q12766 1538 aa14.49□□□□□ -0.09
RPS11-203ENST00000596873 SMARCA2P51531 1590 aa14.48□□□□□ -0.09
RPS11-203ENST00000596873 BAZ1AQ9NRL2 1556 aaPredicted RBP14.46□□□□□ -0.09
RPS11-203ENST00000596873 PEG3Q9GZU2 1588 aa14.42□□□□□ -0.1
RPS11-203ENST00000596873 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
RPS11-203ENST00000596873 MROH2BQ7Z745 1585 aa14.36□□□□□ -0.11
RPS11-203ENST00000596873 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
RPS11-203ENST00000596873 NESP48681 1621 aa14.32□□□□□ -0.12
RPS11-203ENST00000596873 CUX2O14529 1486 aa14.31□□□□□ -0.12
RPS11-203ENST00000596873 LAMC3Q9Y6N6 1575 aa14.25□□□□□ -0.13
RPS11-203ENST00000596873 THOC2Q8NI27 1593 aaKnown RBP14.23□□□□□ -0.13
RPS11-203ENST00000596873 WIZO95785 1651 aa14.23□□□□□ -0.13
RPS11-203ENST00000596873 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
RPS11-203ENST00000596873 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.15
RPS11-203ENST00000596873 CADPSQ9ULU8 1353 aa14.06□□□□□ -0.16
RPS11-203ENST00000596873 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
RPS11-203ENST00000596873 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
RPS11-203ENST00000596873 WDR62O43379 1518 aa14□□□□□ -0.17
RPS11-203ENST00000596873 MRC2Q9UBG0 1479 aa14□□□□□ -0.17
RPS11-203ENST00000596873 PRDM2Q13029 1718 aa13.98□□□□□ -0.17
RPS11-203ENST00000596873 CFTRP13569 1480 aa13.95□□□□□ -0.18
RPS11-203ENST00000596873 CEP164Q9UPV0 1460 aa13.95□□□□□ -0.18
RPS11-203ENST00000596873 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
RPS11-203ENST00000596873 TRIM41Q8WV44 630 aa13.88□□□□□ -0.19
RPS11-203ENST00000596873 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
RPS11-203ENST00000596873 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
RPS11-203ENST00000596873 PLPPR3Q6T4P5 718 aa13.78□□□□□ -0.2
RPS11-203ENST00000596873 TOPBP1Q92547 1522 aa13.69□□□□□ -0.22
RPS11-203ENST00000596873 DNMBPQ6XZF7 1577 aa13.68□□□□□ -0.22
RPS11-203ENST00000596873 MSH5O43196 834 aa13.67□□□□□ -0.22
RPS11-203ENST00000596873 IFT140Q96RY7 1462 aa13.66□□□□□ -0.22
RPS11-203ENST00000596873 ZNF608Q9ULD9 1512 aaPredicted RBP13.65□□□□□ -0.22
RPS11-203ENST00000596873 EIF4G3O43432 1585 aaKnown RBP13.64□□□□□ -0.23
RPS11-203ENST00000596873 ABCC8Q09428 1581 aa13.63□□□□□ -0.23
RPS11-203ENST00000596873 TARBP1Q13395 1621 aaKnown RBP13.63□□□□□ -0.23
RPS11-203ENST00000596873 CHD1O14646 1710 aa13.57□□□□□ -0.24
RPS11-203ENST00000596873 PIAS4Q8N2W9 510 aaPredicted RBP13.57□□□□□ -0.24
RPS11-203ENST00000596873 POLA1P09884 1462 aaPredicted RBP13.56□□□□□ -0.24
RPS11-203ENST00000596873 OSCARQ8IYS5 282 aa13.56□□□□□ -0.24
RPS11-203ENST00000596873 RIMBP3CA6NJZ7 1639 aa13.54□□□□□ -0.24
RPS11-203ENST00000596873 RIMBP3BA6NNM3 1639 aa13.54□□□□□ -0.24
RPS11-203ENST00000596873 RIMBP3Q9UFD9 1639 aa13.54□□□□□ -0.24
RPS11-203ENST00000596873 CUX1P39880 1505 aa13.5□□□□□ -0.25
RPS11-203ENST00000596873 AQRO60306 1485 aaKnown RBP eCLIP13.5□□□□□ -0.25not detected■■■■■ 69
RPS11-203ENST00000596873 WDR97A6NE52 1622 aa13.5□□□□□ -0.25
RPS11-203ENST00000596873 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
RPS11-203ENST00000596873 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
RPS11-203ENST00000596873 PPP6R1Q9UPN7 881 aa13.47□□□□□ -0.25
RPS11-203ENST00000596873 ARHGEF11O15085 1522 aa13.46□□□□□ -0.25
RPS11-203ENST00000596873 ADRA2BP18089 450 aa13.46□□□□□ -0.25
RPS11-203ENST00000596873 SOGA1O94964 1423 aa13.44□□□□□ -0.26
RPS11-203ENST00000596873 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
RPS11-203ENST00000596873 TDRD9Q8NDG6 1382 aaKnown RBP13.41□□□□□ -0.26
RPS11-203ENST00000596873 POTEDQ86YR6 584 aa13.4□□□□□ -0.26
RPS11-203ENST00000596873 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
RPS11-203ENST00000596873 ABCA5Q8WWZ7 1642 aa13.37□□□□□ -0.27
RPS11-203ENST00000596873 CLASP1Q7Z460 1538 aa13.37□□□□□ -0.27
RPS11-203ENST00000596873 MAGI1Q96QZ7 1491 aaPredicted RBP13.36□□□□□ -0.27
RPS11-203ENST00000596873 SUPT5HO00267 1087 aaKnown RBP13.36□□□□□ -0.27
RPS11-203ENST00000596873 GRIN2BQ13224 1484 aa13.35□□□□□ -0.27
RPS11-203ENST00000596873 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
RPS11-203ENST00000596873 ARAP1Q96P48 1450 aa13.34□□□□□ -0.27
RPS11-203ENST00000596873 ABCA10Q8WWZ4 1543 aa13.33□□□□□ -0.28
RPS11-203ENST00000596873 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
RPS11-203ENST00000596873 FBLN2P98095 1184 aa13.32□□□□□ -0.28
RPS11-203ENST00000596873 SYNJ2O15056 1496 aa13.31□□□□□ -0.28
RPS11-203ENST00000596873 GAPVD1Q14C86 1478 aa13.31□□□□□ -0.28
RPS11-203ENST00000596873 TOP2BQ02880 1626 aa13.31□□□□□ -0.28
RPS11-203ENST00000596873 ADAMTS12P58397 1594 aa13.26□□□□□ -0.29
RPS11-203ENST00000596873 CYB5RLQ6IPT4 315 aa13.25□□□□□ -0.29
RPS11-203ENST00000596873 WRNQ14191 1432 aaPredicted RBP eCLIP13.24□□□□□ -0.29
RPS11-203ENST00000596873 CHMP7Q8WUX9 453 aaPredicted RBP13.24□□□□□ -0.29
RPS11-203ENST00000596873 GRIN2AQ12879 1464 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms