RNA–Protein interactions for RNA: ENST00000596828.1

LINC01440-203, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 1,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-203ENST00000596828 AEBP2Q6ZN18 517 aaPredicted RBP25.46■■□□□ 1.67
LINC01440-203ENST00000596828 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
LINC01440-203ENST00000596828 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
LINC01440-203ENST00000596828 SENP3Q9H4L4 574 aaPredicted RBP21.77■■□□□ 1.08
LINC01440-203ENST00000596828 CCDC180Q9P1Z9 1646 aa21.71■■□□□ 1.07
LINC01440-203ENST00000596828 PHF23Q9BUL5 403 aaPredicted RBP21.51■■□□□ 1.03
LINC01440-203ENST00000596828 ABCC9O60706 1549 aa21.49■■□□□ 1.03
LINC01440-203ENST00000596828 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
LINC01440-203ENST00000596828 DCAF8L2P0C7V8 631 aa20.52■□□□□ 0.88
LINC01440-203ENST00000596828 NACADO15069 1562 aa20.42■□□□□ 0.86
LINC01440-203ENST00000596828 FOXD1Q16676 465 aa20.22■□□□□ 0.83
LINC01440-203ENST00000596828 UNC13AQ9UPW8 1703 aa20.2■□□□□ 0.82
LINC01440-203ENST00000596828 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
LINC01440-203ENST00000596828 MYO15BQ96JP2 1530 aa20.14■□□□□ 0.81
LINC01440-203ENST00000596828 PABPN1Q86U42 306 aaKnown RBP eCLIP20.05■□□□□ 0.8
LINC01440-203ENST00000596828 DCAF1Q9Y4B6 1507 aa20.02■□□□□ 0.79
LINC01440-203ENST00000596828 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
LINC01440-203ENST00000596828 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
LINC01440-203ENST00000596828 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
LINC01440-203ENST00000596828 PLPPR3Q6T4P5 718 aa19.67■□□□□ 0.74
LINC01440-203ENST00000596828 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
LINC01440-203ENST00000596828 CC2D2AQ9P2K1 1620 aa19.42■□□□□ 0.7
LINC01440-203ENST00000596828 EIF4G1Q04637 1599 aaKnown RBP19.41■□□□□ 0.7
LINC01440-203ENST00000596828 CECR2Q9BXF3 1484 aa19.28■□□□□ 0.68
LINC01440-203ENST00000596828 ADRA2BP18089 450 aa19.07■□□□□ 0.64
LINC01440-203ENST00000596828 PIAS4Q8N2W9 510 aaPredicted RBP19.05■□□□□ 0.64
LINC01440-203ENST00000596828 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
LINC01440-203ENST00000596828 SMARCA4P51532 1647 aa18.94■□□□□ 0.62
LINC01440-203ENST00000596828 MSH5O43196 834 aa18.89■□□□□ 0.61
LINC01440-203ENST00000596828 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
LINC01440-203ENST00000596828 ATAD2BQ9ULI0 1458 aa18.83■□□□□ 0.6
LINC01440-203ENST00000596828 NCAPD3P42695 1498 aa18.81■□□□□ 0.6
LINC01440-203ENST00000596828 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
LINC01440-203ENST00000596828 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
LINC01440-203ENST00000596828 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
LINC01440-203ENST00000596828 BAZ1BQ9UIG0 1483 aaKnown RBP18.7■□□□□ 0.58
LINC01440-203ENST00000596828 PEG3Q9GZU2 1588 aa18.67■□□□□ 0.58
LINC01440-203ENST00000596828 WIZO95785 1651 aa18.62■□□□□ 0.57
LINC01440-203ENST00000596828 NESP48681 1621 aa18.54■□□□□ 0.56
LINC01440-203ENST00000596828 ERCC6Q03468 1493 aa18.52■□□□□ 0.55
LINC01440-203ENST00000596828 RSF1Q96T23 1441 aaPredicted RBP18.43■□□□□ 0.54
LINC01440-203ENST00000596828 LAMC3Q9Y6N6 1575 aa18.4■□□□□ 0.54
LINC01440-203ENST00000596828 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
LINC01440-203ENST00000596828 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
LINC01440-203ENST00000596828 CUX2O14529 1486 aa18.31■□□□□ 0.52
LINC01440-203ENST00000596828 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
LINC01440-203ENST00000596828 THOC2Q8NI27 1593 aaKnown RBP18.27■□□□□ 0.52
LINC01440-203ENST00000596828 PDS5BQ9NTI5 1447 aa18.25■□□□□ 0.51
LINC01440-203ENST00000596828 CCDC88BA6NC98 1476 aa18.12■□□□□ 0.49
LINC01440-203ENST00000596828 CFTRP13569 1480 aa18.12■□□□□ 0.49
LINC01440-203ENST00000596828 PRDM2Q13029 1718 aa18.12■□□□□ 0.49
LINC01440-203ENST00000596828 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
LINC01440-203ENST00000596828 CEP164Q9UPV0 1460 aa18.11■□□□□ 0.49
LINC01440-203ENST00000596828 MRC2Q9UBG0 1479 aa18.1■□□□□ 0.49
LINC01440-203ENST00000596828 POTEDQ86YR6 584 aa18.05■□□□□ 0.48
LINC01440-203ENST00000596828 WDR62O43379 1518 aa18.04■□□□□ 0.48
LINC01440-203ENST00000596828 DNAJC5Q9H3Z4 198 aa17.99■□□□□ 0.47
LINC01440-203ENST00000596828 URB2Q14146 1524 aaKnown RBP17.94■□□□□ 0.46
LINC01440-203ENST00000596828 SUPT5HO00267 1087 aaKnown RBP17.94■□□□□ 0.46
LINC01440-203ENST00000596828 TOPBP1Q92547 1522 aa17.8■□□□□ 0.44
LINC01440-203ENST00000596828 DNMBPQ6XZF7 1577 aa17.76■□□□□ 0.43
LINC01440-203ENST00000596828 ABCC8Q09428 1581 aa17.73■□□□□ 0.43
LINC01440-203ENST00000596828 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
LINC01440-203ENST00000596828 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
LINC01440-203ENST00000596828 EIF4G3O43432 1585 aaKnown RBP17.64■□□□□ 0.41
LINC01440-203ENST00000596828 TARBP1Q13395 1621 aaKnown RBP17.64■□□□□ 0.41
LINC01440-203ENST00000596828 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
LINC01440-203ENST00000596828 CUX1P39880 1505 aa17.61■□□□□ 0.41
LINC01440-203ENST00000596828 RAD54L2Q9Y4B4 1467 aa17.6■□□□□ 0.41
LINC01440-203ENST00000596828 FGD5Q6ZNL6 1462 aa17.58■□□□□ 0.41
LINC01440-203ENST00000596828 AQRO60306 1485 aaKnown RBP eCLIP17.57■□□□□ 0.4
LINC01440-203ENST00000596828 SOGA1O94964 1423 aa17.55■□□□□ 0.4
LINC01440-203ENST00000596828 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
LINC01440-203ENST00000596828 CHD1O14646 1710 aa17.52■□□□□ 0.4
LINC01440-203ENST00000596828 TDRD9Q8NDG6 1382 aaKnown RBP17.51■□□□□ 0.39
LINC01440-203ENST00000596828 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
LINC01440-203ENST00000596828 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
LINC01440-203ENST00000596828 FBLN2P98095 1184 aa17.45■□□□□ 0.38
LINC01440-203ENST00000596828 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
LINC01440-203ENST00000596828 PBRM1Q86U86 1689 aa17.43■□□□□ 0.38
LINC01440-203ENST00000596828 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
LINC01440-203ENST00000596828 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
LINC01440-203ENST00000596828 BIVM-ERCC5R4GMW8 1640 aa17.42■□□□□ 0.38
LINC01440-203ENST00000596828 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
LINC01440-203ENST00000596828 SNAPC4Q5SXM2 1469 aa17.4■□□□□ 0.38
LINC01440-203ENST00000596828 TOP2BQ02880 1626 aa17.39■□□□□ 0.38
LINC01440-203ENST00000596828 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
LINC01440-203ENST00000596828 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
LINC01440-203ENST00000596828 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
LINC01440-203ENST00000596828 GRIN2BQ13224 1484 aa17.36■□□□□ 0.37
LINC01440-203ENST00000596828 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
LINC01440-203ENST00000596828 ABCA10Q8WWZ4 1543 aa17.35■□□□□ 0.37
LINC01440-203ENST00000596828 ABCA5Q8WWZ7 1642 aa17.34■□□□□ 0.37
LINC01440-203ENST00000596828 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
LINC01440-203ENST00000596828 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
LINC01440-203ENST00000596828 ARHGEF11O15085 1522 aa17.29■□□□□ 0.36
LINC01440-203ENST00000596828 SYNJ2O15056 1496 aa17.26■□□□□ 0.35
LINC01440-203ENST00000596828 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
LINC01440-203ENST00000596828 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
LINC01440-203ENST00000596828 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms