RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 NISCHQ9Y2I1 1504 aa18.73■□□□□ 0.59
SIN3B-208ENST00000596638 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
SIN3B-208ENST00000596638 ABCC9O60706 1549 aa16.8■□□□□ 0.28
SIN3B-208ENST00000596638 CCDC180Q9P1Z9 1646 aa16.61■□□□□ 0.25
SIN3B-208ENST00000596638 CHIC1Q5VXU3 224 aa16.43■□□□□ 0.22
SIN3B-208ENST00000596638 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
SIN3B-208ENST00000596638 DCAF8L2P0C7V8 631 aa15.94■□□□□ 0.14
SIN3B-208ENST00000596638 RB1CC1Q8TDY2 1594 aa15.86■□□□□ 0.13
SIN3B-208ENST00000596638 NACADO15069 1562 aa15.79■□□□□ 0.12
SIN3B-208ENST00000596638 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
SIN3B-208ENST00000596638 MYO15BQ96JP2 1530 aa15.58■□□□□ 0.08
SIN3B-208ENST00000596638 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
SIN3B-208ENST00000596638 UNC13AQ9UPW8 1703 aa15.51■□□□□ 0.07
SIN3B-208ENST00000596638 ZCCHC6Q5VYS8 1495 aaKnown RBP15.49■□□□□ 0.07
SIN3B-208ENST00000596638 DCAF1Q9Y4B6 1507 aa15.39■□□□□ 0.05
SIN3B-208ENST00000596638 SCRIBQ14160 1630 aa15.25■□□□□ 0.03
SIN3B-208ENST00000596638 CC2D2AQ9P2K1 1620 aa15.11■□□□□ 0.01
SIN3B-208ENST00000596638 SHROOM4Q9ULL8 1493 aa15.11■□□□□ 0.01
SIN3B-208ENST00000596638 CECR2Q9BXF3 1484 aa15.09■□□□□ 0.01
SIN3B-208ENST00000596638 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
SIN3B-208ENST00000596638 DNAJC5Q9H3Z4 198 aa15.06■□□□□ 0
SIN3B-208ENST00000596638 SENP3Q9H4L4 574 aaPredicted RBP14.99□□□□□ -0.01
SIN3B-208ENST00000596638 PHF23Q9BUL5 403 aaPredicted RBP14.77□□□□□ -0.05
SIN3B-208ENST00000596638 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
SIN3B-208ENST00000596638 ATAD2BQ9ULI0 1458 aa14.63□□□□□ -0.07
SIN3B-208ENST00000596638 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
SIN3B-208ENST00000596638 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
SIN3B-208ENST00000596638 NESP48681 1621 aa14.48□□□□□ -0.09
SIN3B-208ENST00000596638 SMARCA2P51531 1590 aa14.47□□□□□ -0.09
SIN3B-208ENST00000596638 BAZ1AQ9NRL2 1556 aaPredicted RBP14.45□□□□□ -0.1
SIN3B-208ENST00000596638 HMGXB3Q12766 1538 aa14.44□□□□□ -0.1
SIN3B-208ENST00000596638 BAZ1BQ9UIG0 1483 aaKnown RBP14.42□□□□□ -0.1
SIN3B-208ENST00000596638 ERCC6Q03468 1493 aa14.4□□□□□ -0.1
SIN3B-208ENST00000596638 SUPT5HO00267 1087 aaKnown RBP14.4□□□□□ -0.1
SIN3B-208ENST00000596638 PEG3Q9GZU2 1588 aa14.39□□□□□ -0.11
SIN3B-208ENST00000596638 CUX2O14529 1486 aa14.35□□□□□ -0.11
SIN3B-208ENST00000596638 WIZO95785 1651 aa14.26□□□□□ -0.13
SIN3B-208ENST00000596638 CADPSQ9ULU8 1353 aa14.24□□□□□ -0.13
SIN3B-208ENST00000596638 RSF1Q96T23 1441 aaPredicted RBP14.22□□□□□ -0.13
SIN3B-208ENST00000596638 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
SIN3B-208ENST00000596638 PDS5BQ9NTI5 1447 aa14.19□□□□□ -0.14
SIN3B-208ENST00000596638 HRCP23327 699 aa14.18□□□□□ -0.14
SIN3B-208ENST00000596638 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
SIN3B-208ENST00000596638 KIF21AQ7Z4S6 1674 aa14.14□□□□□ -0.15
SIN3B-208ENST00000596638 CFTRP13569 1480 aa14.06□□□□□ -0.16
SIN3B-208ENST00000596638 MRC2Q9UBG0 1479 aa14.06□□□□□ -0.16
SIN3B-208ENST00000596638 FANCD2Q9BXW9 1451 aa14.03□□□□□ -0.16
SIN3B-208ENST00000596638 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
SIN3B-208ENST00000596638 WDR62O43379 1518 aa14□□□□□ -0.17
SIN3B-208ENST00000596638 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
SIN3B-208ENST00000596638 CEP164Q9UPV0 1460 aa13.99□□□□□ -0.17
SIN3B-208ENST00000596638 FOXD1Q16676 465 aa13.97□□□□□ -0.17
SIN3B-208ENST00000596638 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
SIN3B-208ENST00000596638 TRIM41Q8WV44 630 aa13.87□□□□□ -0.19
SIN3B-208ENST00000596638 PCGF6Q9BYE7 350 aa13.87□□□□□ -0.19
SIN3B-208ENST00000596638 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
SIN3B-208ENST00000596638 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
SIN3B-208ENST00000596638 TOPBP1Q92547 1522 aa13.77□□□□□ -0.21
SIN3B-208ENST00000596638 TRIM26Q12899 539 aaPredicted RBP13.76□□□□□ -0.21
SIN3B-208ENST00000596638 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
SIN3B-208ENST00000596638 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.212e-12■■■■■ 53.3
SIN3B-208ENST00000596638 LOC105371045A0A1W2PR82 267 aa13.7□□□□□ -0.22
SIN3B-208ENST00000596638 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
SIN3B-208ENST00000596638 ABCC8Q09428 1581 aa13.67□□□□□ -0.22
SIN3B-208ENST00000596638 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
SIN3B-208ENST00000596638 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
SIN3B-208ENST00000596638 DNMBPQ6XZF7 1577 aa13.66□□□□□ -0.22
SIN3B-208ENST00000596638 POLA1P09884 1462 aaPredicted RBP13.64□□□□□ -0.23
SIN3B-208ENST00000596638 TDRD9Q8NDG6 1382 aaKnown RBP13.64□□□□□ -0.23
SIN3B-208ENST00000596638 TARBP1Q13395 1621 aaKnown RBP13.63□□□□□ -0.23
SIN3B-208ENST00000596638 SOGA1O94964 1423 aa13.63□□□□□ -0.23
SIN3B-208ENST00000596638 FBLN2P98095 1184 aa13.6□□□□□ -0.23
SIN3B-208ENST00000596638 PPARGC1BQ86YN6 1023 aaKnown RBP13.6□□□□□ -0.23
SIN3B-208ENST00000596638 EIF4G3O43432 1585 aaKnown RBP13.58□□□□□ -0.23
SIN3B-208ENST00000596638 CYB5RLQ6IPT4 315 aa13.58□□□□□ -0.24
SIN3B-208ENST00000596638 CUX1P39880 1505 aa13.57□□□□□ -0.24
SIN3B-208ENST00000596638 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
SIN3B-208ENST00000596638 RIMBP3CA6NJZ7 1639 aa13.55□□□□□ -0.24
SIN3B-208ENST00000596638 RIMBP3BA6NNM3 1639 aa13.55□□□□□ -0.24
SIN3B-208ENST00000596638 RIMBP3Q9UFD9 1639 aa13.55□□□□□ -0.24
SIN3B-208ENST00000596638 ARHGEF11O15085 1522 aa13.53□□□□□ -0.24
SIN3B-208ENST00000596638 CHMP7Q8WUX9 453 aaPredicted RBP13.49□□□□□ -0.25
SIN3B-208ENST00000596638 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
SIN3B-208ENST00000596638 CHD1O14646 1710 aa13.47□□□□□ -0.25
SIN3B-208ENST00000596638 ARAP1Q96P48 1450 aa13.43□□□□□ -0.26
SIN3B-208ENST00000596638 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
SIN3B-208ENST00000596638 GAPVD1Q14C86 1478 aa13.41□□□□□ -0.26
SIN3B-208ENST00000596638 ABCA10Q8WWZ4 1543 aa13.39□□□□□ -0.27
SIN3B-208ENST00000596638 MAGI1Q96QZ7 1491 aaPredicted RBP13.38□□□□□ -0.27
SIN3B-208ENST00000596638 SYNJ2O15056 1496 aa13.37□□□□□ -0.27
SIN3B-208ENST00000596638 CLASP1Q7Z460 1538 aa13.37□□□□□ -0.27
SIN3B-208ENST00000596638 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
SIN3B-208ENST00000596638 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
SIN3B-208ENST00000596638 WRNQ14191 1432 aaPredicted RBP eCLIP13.34□□□□□ -0.27
SIN3B-208ENST00000596638 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
SIN3B-208ENST00000596638 PELP1Q8IZL8 1130 aaKnown RBP13.31□□□□□ -0.28
SIN3B-208ENST00000596638 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
SIN3B-208ENST00000596638 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
SIN3B-208ENST00000596638 PBRM1Q86U86 1689 aa13.28□□□□□ -0.28
SIN3B-208ENST00000596638 ERCC6L2Q5T890 1561 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms