RNA–Protein interactions for RNA: ENST00000596544.1

CEACAM3-205, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 3

Gene CEACAM3, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-205ENST00000596544 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
CEACAM3-205ENST00000596544 AEBP2Q6ZN18 517 aaPredicted RBP17.85■□□□□ 0.45
CEACAM3-205ENST00000596544 ABCC9O60706 1549 aa17.33■□□□□ 0.37
CEACAM3-205ENST00000596544 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
CEACAM3-205ENST00000596544 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
CEACAM3-205ENST00000596544 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
CEACAM3-205ENST00000596544 RB1CC1Q8TDY2 1594 aa16.39■□□□□ 0.21
CEACAM3-205ENST00000596544 DCAF8L2P0C7V8 631 aa16.25■□□□□ 0.19
CEACAM3-205ENST00000596544 NACADO15069 1562 aa16.2■□□□□ 0.18
CEACAM3-205ENST00000596544 PABPN1Q86U42 306 aaKnown RBP eCLIP16.13■□□□□ 0.17
CEACAM3-205ENST00000596544 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.16
CEACAM3-205ENST00000596544 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
CEACAM3-205ENST00000596544 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
CEACAM3-205ENST00000596544 CC2D2AQ9P2K1 1620 aa15.62■□□□□ 0.09
CEACAM3-205ENST00000596544 CECR2Q9BXF3 1484 aa15.62■□□□□ 0.09
CEACAM3-205ENST00000596544 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
CEACAM3-205ENST00000596544 ZCCHC6Q5VYS8 1495 aaKnown RBP15.58■□□□□ 0.08
CEACAM3-205ENST00000596544 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
CEACAM3-205ENST00000596544 DCAF1Q9Y4B6 1507 aa15.56■□□□□ 0.08
CEACAM3-205ENST00000596544 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
CEACAM3-205ENST00000596544 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
CEACAM3-205ENST00000596544 DNAJC5Q9H3Z4 198 aa15.27■□□□□ 0.04
CEACAM3-205ENST00000596544 PHF23Q9BUL5 403 aaPredicted RBP15.14■□□□□ 0.01
CEACAM3-205ENST00000596544 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
CEACAM3-205ENST00000596544 CUX2O14529 1486 aa14.99□□□□□ -0.01
CEACAM3-205ENST00000596544 NCAPD3P42695 1498 aa14.93□□□□□ -0.02
CEACAM3-205ENST00000596544 ATAD2BQ9ULI0 1458 aa14.86□□□□□ -0.03
CEACAM3-205ENST00000596544 SMARCA2P51531 1590 aa14.84□□□□□ -0.03
CEACAM3-205ENST00000596544 SMARCA4P51532 1647 aa14.8□□□□□ -0.04
CEACAM3-205ENST00000596544 NESP48681 1621 aa14.79□□□□□ -0.04
CEACAM3-205ENST00000596544 HMGXB3Q12766 1538 aa14.79□□□□□ -0.04
CEACAM3-205ENST00000596544 BAZ1BQ9UIG0 1483 aaKnown RBP14.75□□□□□ -0.05
CEACAM3-205ENST00000596544 BAZ1AQ9NRL2 1556 aaPredicted RBP14.71□□□□□ -0.05
CEACAM3-205ENST00000596544 LAMC3Q9Y6N6 1575 aa14.67□□□□□ -0.06
CEACAM3-205ENST00000596544 THOC2Q8NI27 1593 aaKnown RBP14.65□□□□□ -0.06
CEACAM3-205ENST00000596544 KIF21AQ7Z4S6 1674 aa14.62□□□□□ -0.07
CEACAM3-205ENST00000596544 PEG3Q9GZU2 1588 aa14.61□□□□□ -0.07
CEACAM3-205ENST00000596544 PDS5BQ9NTI5 1447 aa14.61□□□□□ -0.07
CEACAM3-205ENST00000596544 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
CEACAM3-205ENST00000596544 MROH2BQ7Z745 1585 aa14.56□□□□□ -0.08
CEACAM3-205ENST00000596544 CADPSQ9ULU8 1353 aa14.49□□□□□ -0.09
CEACAM3-205ENST00000596544 MRC2Q9UBG0 1479 aa14.47□□□□□ -0.09
CEACAM3-205ENST00000596544 WIZO95785 1651 aa14.42□□□□□ -0.1
CEACAM3-205ENST00000596544 WDR62O43379 1518 aa14.41□□□□□ -0.1
CEACAM3-205ENST00000596544 CEP164Q9UPV0 1460 aa14.38□□□□□ -0.11
CEACAM3-205ENST00000596544 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
CEACAM3-205ENST00000596544 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
CEACAM3-205ENST00000596544 CFTRP13569 1480 aa14.25□□□□□ -0.13
CEACAM3-205ENST00000596544 FOXD1Q16676 465 aa14.25□□□□□ -0.13
CEACAM3-205ENST00000596544 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
CEACAM3-205ENST00000596544 TOP2AP11388 1531 aaKnown RBP14.18□□□□□ -0.14
CEACAM3-205ENST00000596544 RSF1Q96T23 1441 aaPredicted RBP14.17□□□□□ -0.14
CEACAM3-205ENST00000596544 PRDM2Q13029 1718 aa14.16□□□□□ -0.14
CEACAM3-205ENST00000596544 RIMBP3CA6NJZ7 1639 aa14.13□□□□□ -0.15
CEACAM3-205ENST00000596544 RIMBP3BA6NNM3 1639 aa14.13□□□□□ -0.15
CEACAM3-205ENST00000596544 RIMBP3Q9UFD9 1639 aa14.13□□□□□ -0.15
CEACAM3-205ENST00000596544 IFT140Q96RY7 1462 aa14.09□□□□□ -0.15
CEACAM3-205ENST00000596544 ZNF608Q9ULD9 1512 aaPredicted RBP14.07□□□□□ -0.16
CEACAM3-205ENST00000596544 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
CEACAM3-205ENST00000596544 CCDC88BA6NC98 1476 aa14.05□□□□□ -0.16
CEACAM3-205ENST00000596544 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
CEACAM3-205ENST00000596544 TRHP20396 242 aaPredicted RBP14.03□□□□□ -0.16
CEACAM3-205ENST00000596544 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
CEACAM3-205ENST00000596544 ABCC8Q09428 1581 aa14.03□□□□□ -0.16
CEACAM3-205ENST00000596544 FBLN2P98095 1184 aa14.02□□□□□ -0.17
CEACAM3-205ENST00000596544 EIF4G3O43432 1585 aaKnown RBP14□□□□□ -0.17
CEACAM3-205ENST00000596544 CHD1O14646 1710 aa13.98□□□□□ -0.17
CEACAM3-205ENST00000596544 DNMBPQ6XZF7 1577 aa13.96□□□□□ -0.17
CEACAM3-205ENST00000596544 AQRO60306 1485 aaKnown RBP eCLIP13.95□□□□□ -0.18
CEACAM3-205ENST00000596544 TARBP1Q13395 1621 aaKnown RBP13.91□□□□□ -0.18
CEACAM3-205ENST00000596544 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
CEACAM3-205ENST00000596544 SOGA1O94964 1423 aa13.86□□□□□ -0.19
CEACAM3-205ENST00000596544 POLA1P09884 1462 aaPredicted RBP13.86□□□□□ -0.19
CEACAM3-205ENST00000596544 TDRD9Q8NDG6 1382 aaKnown RBP13.84□□□□□ -0.19
CEACAM3-205ENST00000596544 CHMP7Q8WUX9 453 aaPredicted RBP13.84□□□□□ -0.19
CEACAM3-205ENST00000596544 RAD54L2Q9Y4B4 1467 aa13.84□□□□□ -0.19
CEACAM3-205ENST00000596544 SNAPC4Q5SXM2 1469 aa13.79□□□□□ -0.2
CEACAM3-205ENST00000596544 SYNJ1O43426 1573 aa13.78□□□□□ -0.2
CEACAM3-205ENST00000596544 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
CEACAM3-205ENST00000596544 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
CEACAM3-205ENST00000596544 CLASP1Q7Z460 1538 aa13.74□□□□□ -0.21
CEACAM3-205ENST00000596544 MAGI1Q96QZ7 1491 aaPredicted RBP13.74□□□□□ -0.21
CEACAM3-205ENST00000596544 GRIN2BQ13224 1484 aa13.73□□□□□ -0.21
CEACAM3-205ENST00000596544 SYNJ2O15056 1496 aa13.7□□□□□ -0.22
CEACAM3-205ENST00000596544 CUX1P39880 1505 aa13.69□□□□□ -0.22
CEACAM3-205ENST00000596544 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
CEACAM3-205ENST00000596544 GAPVD1Q14C86 1478 aa13.66□□□□□ -0.22
CEACAM3-205ENST00000596544 PLPPR3Q6T4P5 718 aa13.65□□□□□ -0.22
CEACAM3-205ENST00000596544 ABCA10Q8WWZ4 1543 aa13.57□□□□□ -0.24
CEACAM3-205ENST00000596544 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
CEACAM3-205ENST00000596544 GRIN2AQ12879 1464 aa13.54□□□□□ -0.24
CEACAM3-205ENST00000596544 SUPT5HO00267 1087 aaKnown RBP13.53□□□□□ -0.24
CEACAM3-205ENST00000596544 WRNQ14191 1432 aaPredicted RBP eCLIP13.53□□□□□ -0.24
CEACAM3-205ENST00000596544 ERCC6L2Q5T890 1561 aa13.53□□□□□ -0.24
CEACAM3-205ENST00000596544 CEP170Q5SW79 1584 aa13.5□□□□□ -0.25
CEACAM3-205ENST00000596544 MSH5O43196 834 aa13.48□□□□□ -0.25
CEACAM3-205ENST00000596544 ADAMTS12P58397 1594 aa13.48□□□□□ -0.25
CEACAM3-205ENST00000596544 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
CEACAM3-205ENST00000596544 NUP160Q12769 1436 aa13.47□□□□□ -0.25
CEACAM3-205ENST00000596544 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms