RNA–Protein interactions for RNA: ENST00000596233.1

GINS2-203, Transcript of GINS complex subunit 2, humanhuman

TSL 3

Gene GINS2, Length 537 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS2-203ENST00000596233 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
GINS2-203ENST00000596233 ABCC9O60706 1549 aa25.29■■□□□ 1.64
GINS2-203ENST00000596233 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
GINS2-203ENST00000596233 DNAJC5BQ9UF47 199 aa24.23■■□□□ 1.47
GINS2-203ENST00000596233 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
GINS2-203ENST00000596233 NACADO15069 1562 aa23.49■■□□□ 1.35
GINS2-203ENST00000596233 PABPN1Q86U42 306 aaKnown RBP eCLIP23.44■■□□□ 1.34
GINS2-203ENST00000596233 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
GINS2-203ENST00000596233 UNC13AQ9UPW8 1703 aa23.23■■□□□ 1.31
GINS2-203ENST00000596233 BICRAQ9NZM4 1560 aa23.08■■□□□ 1.29
GINS2-203ENST00000596233 MYO15BQ96JP2 1530 aa22.94■■□□□ 1.26
GINS2-203ENST00000596233 CECR2Q9BXF3 1484 aa22.86■■□□□ 1.25
GINS2-203ENST00000596233 CC2D2AQ9P2K1 1620 aa22.81■■□□□ 1.24
GINS2-203ENST00000596233 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
GINS2-203ENST00000596233 DNAJC5Q9H3Z4 198 aa22.78■■□□□ 1.24
GINS2-203ENST00000596233 EIF4G1Q04637 1599 aaKnown RBP22.61■■□□□ 1.21
GINS2-203ENST00000596233 SCRIBQ14160 1630 aa22.44■■□□□ 1.18
GINS2-203ENST00000596233 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
GINS2-203ENST00000596233 ZCCHC6Q5VYS8 1495 aaKnown RBP22.38■■□□□ 1.17
GINS2-203ENST00000596233 CUX2O14529 1486 aa22.09■■□□□ 1.13
GINS2-203ENST00000596233 ERCC6Q03468 1493 aa21.94■■□□□ 1.1
GINS2-203ENST00000596233 NCAPD3P42695 1498 aa21.68■■□□□ 1.06
GINS2-203ENST00000596233 TRIM41Q8WV44 630 aa21.56■■□□□ 1.04
GINS2-203ENST00000596233 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.03
GINS2-203ENST00000596233 NESP48681 1621 aa21.51■■□□□ 1.03
GINS2-203ENST00000596233 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
GINS2-203ENST00000596233 SMARCA2P51531 1590 aa21.46■■□□□ 1.03
GINS2-203ENST00000596233 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
GINS2-203ENST00000596233 SMARCA4P51532 1647 aa21.34■■□□□ 1.01
GINS2-203ENST00000596233 LAMC3Q9Y6N6 1575 aa21.31■■□□□ 1
GINS2-203ENST00000596233 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
GINS2-203ENST00000596233 KIF21AQ7Z4S6 1674 aa21.24■□□□□ 0.99
GINS2-203ENST00000596233 PDS5BQ9NTI5 1447 aa21.23■□□□□ 0.99
GINS2-203ENST00000596233 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
GINS2-203ENST00000596233 PEG3Q9GZU2 1588 aa21.13■□□□□ 0.97
GINS2-203ENST00000596233 MRC2Q9UBG0 1479 aa21.07■□□□□ 0.96
GINS2-203ENST00000596233 WDR62O43379 1518 aa21.02■□□□□ 0.96
GINS2-203ENST00000596233 CADPSQ9ULU8 1353 aa21■□□□□ 0.95
GINS2-203ENST00000596233 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
GINS2-203ENST00000596233 MROH2BQ7Z745 1585 aa20.9■□□□□ 0.94
GINS2-203ENST00000596233 CEP164Q9UPV0 1460 aa20.87■□□□□ 0.93
GINS2-203ENST00000596233 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
GINS2-203ENST00000596233 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
GINS2-203ENST00000596233 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
GINS2-203ENST00000596233 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
GINS2-203ENST00000596233 WIZO95785 1651 aa20.63■□□□□ 0.89
GINS2-203ENST00000596233 ARHGEF11O15085 1522 aa20.62■□□□□ 0.89
GINS2-203ENST00000596233 URB2Q14146 1524 aaKnown RBP20.61■□□□□ 0.89
GINS2-203ENST00000596233 CFTRP13569 1480 aa20.61■□□□□ 0.89
GINS2-203ENST00000596233 TRHP20396 242 aaPredicted RBP20.55■□□□□ 0.88
GINS2-203ENST00000596233 CYB5RLQ6IPT4 315 aa20.53■□□□□ 0.88
GINS2-203ENST00000596233 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
GINS2-203ENST00000596233 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
GINS2-203ENST00000596233 ZNF608Q9ULD9 1512 aaPredicted RBP20.45■□□□□ 0.86
GINS2-203ENST00000596233 PRDM2Q13029 1718 aa20.38■□□□□ 0.85
GINS2-203ENST00000596233 TOP2AP11388 1531 aaKnown RBP20.36■□□□□ 0.85
GINS2-203ENST00000596233 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
GINS2-203ENST00000596233 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
GINS2-203ENST00000596233 CHD1O14646 1710 aa20.3■□□□□ 0.84
GINS2-203ENST00000596233 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
GINS2-203ENST00000596233 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
GINS2-203ENST00000596233 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
GINS2-203ENST00000596233 FBLN2P98095 1184 aa20.25■□□□□ 0.83
GINS2-203ENST00000596233 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.821e-6■■■■■ 33
GINS2-203ENST00000596233 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
GINS2-203ENST00000596233 TARBP1Q13395 1621 aaKnown RBP20.14■□□□□ 0.81
GINS2-203ENST00000596233 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
GINS2-203ENST00000596233 CLASP1Q7Z460 1538 aa20.04■□□□□ 0.8
GINS2-203ENST00000596233 POLA1P09884 1462 aaPredicted RBP20.04■□□□□ 0.8
GINS2-203ENST00000596233 SYNJ1O43426 1573 aa20.02■□□□□ 0.8
GINS2-203ENST00000596233 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
GINS2-203ENST00000596233 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
GINS2-203ENST00000596233 TDRD9Q8NDG6 1382 aaKnown RBP19.98■□□□□ 0.79
GINS2-203ENST00000596233 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
GINS2-203ENST00000596233 SOGA1O94964 1423 aa19.95■□□□□ 0.78
GINS2-203ENST00000596233 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
GINS2-203ENST00000596233 MAGI1Q96QZ7 1491 aaPredicted RBP19.93■□□□□ 0.78
GINS2-203ENST00000596233 GAPVD1Q14C86 1478 aa19.91■□□□□ 0.78
GINS2-203ENST00000596233 SYNJ2O15056 1496 aa19.87■□□□□ 0.77
GINS2-203ENST00000596233 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
GINS2-203ENST00000596233 FGD5Q6ZNL6 1462 aa19.83■□□□□ 0.76
GINS2-203ENST00000596233 PBRM1Q86U86 1689 aa19.73■□□□□ 0.75
GINS2-203ENST00000596233 CUX1P39880 1505 aa19.68■□□□□ 0.74
GINS2-203ENST00000596233 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
GINS2-203ENST00000596233 KIF13AQ9H1H9 1805 aa19.62■□□□□ 0.73
GINS2-203ENST00000596233 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
GINS2-203ENST00000596233 GRIN2AQ12879 1464 aa19.6■□□□□ 0.73
GINS2-203ENST00000596233 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.73
GINS2-203ENST00000596233 ILDR1Q86SU0 546 aaPredicted RBP19.57■□□□□ 0.72
GINS2-203ENST00000596233 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
GINS2-203ENST00000596233 NUP160Q12769 1436 aa19.54■□□□□ 0.72
GINS2-203ENST00000596233 SHROOM2Q13796 1616 aa19.52■□□□□ 0.72
GINS2-203ENST00000596233 ADAMTS12P58397 1594 aa19.5■□□□□ 0.71
GINS2-203ENST00000596233 FAM69CQ0P6D2 419 aa19.49■□□□□ 0.71
GINS2-203ENST00000596233 KDM4FA0A1W2PPD8 638 aa19.46■□□□□ 0.71
GINS2-203ENST00000596233 ABCC10Q5T3U5 1492 aa19.46■□□□□ 0.71
GINS2-203ENST00000596233 NPM1P06748 294 aaKnown RBP eCLIP19.45■□□□□ 0.7
GINS2-203ENST00000596233 FHAD1B1AJZ9 1412 aa19.43■□□□□ 0.7
GINS2-203ENST00000596233 PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
GINS2-203ENST00000596233 KDM6BO15054 1643 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms