RNA–Protein interactions for RNA: ENST00000595689.2

SSX4-201, Transcript of SSX family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4, Length 1,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4-201ENST00000595689 NISCHQ9Y2I1 1504 aa14.56□□□□□ -0.08
SSX4-201ENST00000595689 AEBP2Q6ZN18 517 aaPredicted RBP13.78□□□□□ -0.2
SSX4-201ENST00000595689 CHIC1Q5VXU3 224 aa13.3□□□□□ -0.28
SSX4-201ENST00000595689 CCDC180Q9P1Z9 1646 aa13.04□□□□□ -0.32
SSX4-201ENST00000595689 ABCC9O60706 1549 aa12.85□□□□□ -0.35
SSX4-201ENST00000595689 RB1CC1Q8TDY2 1594 aa12.3□□□□□ -0.44
SSX4-201ENST00000595689 NACADO15069 1562 aa12.25□□□□□ -0.45
SSX4-201ENST00000595689 DCAF8L2P0C7V8 631 aa12.15□□□□□ -0.46
SSX4-201ENST00000595689 ZCCHC6Q5VYS8 1495 aaKnown RBP12.13□□□□□ -0.47
SSX4-201ENST00000595689 MYO15BQ96JP2 1530 aa12.12□□□□□ -0.47
SSX4-201ENST00000595689 UNC13AQ9UPW8 1703 aa12.11□□□□□ -0.47
SSX4-201ENST00000595689 DCAF1Q9Y4B6 1507 aa12.04□□□□□ -0.48
SSX4-201ENST00000595689 BICRAQ9NZM4 1560 aa11.97□□□□□ -0.49
SSX4-201ENST00000595689 PABPN1Q86U42 306 aaKnown RBP eCLIP11.95□□□□□ -0.5
SSX4-201ENST00000595689 SCRIBQ14160 1630 aa11.89□□□□□ -0.51
SSX4-201ENST00000595689 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
SSX4-201ENST00000595689 SENP3Q9H4L4 574 aaPredicted RBP11.83□□□□□ -0.52
SSX4-201ENST00000595689 SHROOM4Q9ULL8 1493 aa11.78□□□□□ -0.52
SSX4-201ENST00000595689 PHF23Q9BUL5 403 aaPredicted RBP11.65□□□□□ -0.54
SSX4-201ENST00000595689 EIF4G1Q04637 1599 aaKnown RBP11.65□□□□□ -0.54
SSX4-201ENST00000595689 CC2D2AQ9P2K1 1620 aa11.64□□□□□ -0.55
SSX4-201ENST00000595689 CECR2Q9BXF3 1484 aa11.54□□□□□ -0.56
SSX4-201ENST00000595689 SMARCA4P51532 1647 aa11.35□□□□□ -0.59
SSX4-201ENST00000595689 BAZ1AQ9NRL2 1556 aaPredicted RBP11.29□□□□□ -0.6
SSX4-201ENST00000595689 NCAPD3P42695 1498 aa11.29□□□□□ -0.6
SSX4-201ENST00000595689 ATAD2BQ9ULI0 1458 aa11.29□□□□□ -0.6
SSX4-201ENST00000595689 SMARCA2P51531 1590 aa11.27□□□□□ -0.61
SSX4-201ENST00000595689 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
SSX4-201ENST00000595689 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
SSX4-201ENST00000595689 PEG3Q9GZU2 1588 aa11.23□□□□□ -0.61
SSX4-201ENST00000595689 BAZ1BQ9UIG0 1483 aaKnown RBP11.19□□□□□ -0.62
SSX4-201ENST00000595689 WIZO95785 1651 aa11.14□□□□□ -0.63
SSX4-201ENST00000595689 NESP48681 1621 aa11.1□□□□□ -0.63
SSX4-201ENST00000595689 ERCC6Q03468 1493 aa11.06□□□□□ -0.64
SSX4-201ENST00000595689 RSF1Q96T23 1441 aaPredicted RBP11.04□□□□□ -0.64
SSX4-201ENST00000595689 LAMC3Q9Y6N6 1575 aa11.03□□□□□ -0.64
SSX4-201ENST00000595689 KIF21AQ7Z4S6 1674 aa11□□□□□ -0.65
SSX4-201ENST00000595689 CUX2O14529 1486 aa11□□□□□ -0.65
SSX4-201ENST00000595689 THOC2Q8NI27 1593 aaKnown RBP10.99□□□□□ -0.65
SSX4-201ENST00000595689 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
SSX4-201ENST00000595689 CADPSQ9ULU8 1353 aa10.94□□□□□ -0.66
SSX4-201ENST00000595689 FOXD1Q16676 465 aa10.94□□□□□ -0.66
SSX4-201ENST00000595689 PDS5BQ9NTI5 1447 aa10.92□□□□□ -0.66
SSX4-201ENST00000595689 CFTRP13569 1480 aa10.87□□□□□ -0.67
SSX4-201ENST00000595689 PRDM2Q13029 1718 aa10.86□□□□□ -0.67
SSX4-201ENST00000595689 MRC2Q9UBG0 1479 aa10.86□□□□□ -0.67
SSX4-201ENST00000595689 WDR62O43379 1518 aa10.84□□□□□ -0.67
SSX4-201ENST00000595689 CCDC88BA6NC98 1476 aa10.84□□□□□ -0.67
SSX4-201ENST00000595689 FANCD2Q9BXW9 1451 aa10.84□□□□□ -0.67
SSX4-201ENST00000595689 CEP164Q9UPV0 1460 aa10.84□□□□□ -0.67
SSX4-201ENST00000595689 DNAJC5Q9H3Z4 198 aa10.77□□□□□ -0.69
SSX4-201ENST00000595689 URB2Q14146 1524 aaKnown RBP10.77□□□□□ -0.69
SSX4-201ENST00000595689 PLPPR3Q6T4P5 718 aa10.76□□□□□ -0.69
SSX4-201ENST00000595689 TOPBP1Q92547 1522 aa10.67□□□□□ -0.7
SSX4-201ENST00000595689 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.7
SSX4-201ENST00000595689 SUPT5HO00267 1087 aaKnown RBP10.63□□□□□ -0.71
SSX4-201ENST00000595689 ABCC8Q09428 1581 aa10.61□□□□□ -0.71
SSX4-201ENST00000595689 ZNF608Q9ULD9 1512 aaPredicted RBP10.61□□□□□ -0.71
SSX4-201ENST00000595689 IFT140Q96RY7 1462 aa10.61□□□□□ -0.71
SSX4-201ENST00000595689 TARBP1Q13395 1621 aaKnown RBP10.58□□□□□ -0.72
SSX4-201ENST00000595689 EIF4G3O43432 1585 aaKnown RBP10.58□□□□□ -0.72
SSX4-201ENST00000595689 POLA1P09884 1462 aaPredicted RBP10.57□□□□□ -0.72
SSX4-201ENST00000595689 CUX1P39880 1505 aa10.56□□□□□ -0.72
SSX4-201ENST00000595689 FGD5Q6ZNL6 1462 aa10.53□□□□□ -0.72
SSX4-201ENST00000595689 RAD54L2Q9Y4B4 1467 aa10.53□□□□□ -0.72
SSX4-201ENST00000595689 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
SSX4-201ENST00000595689 AQRO60306 1485 aaKnown RBP eCLIP10.5□□□□□ -0.73
SSX4-201ENST00000595689 CHD1O14646 1710 aa10.49□□□□□ -0.73
SSX4-201ENST00000595689 SOGA1O94964 1423 aa10.49□□□□□ -0.73
SSX4-201ENST00000595689 OSCARQ8IYS5 282 aa10.46□□□□□ -0.73
SSX4-201ENST00000595689 BIVM-ERCC5R4GMW8 1640 aa10.45□□□□□ -0.74
SSX4-201ENST00000595689 TDRD9Q8NDG6 1382 aaKnown RBP10.45□□□□□ -0.74
SSX4-201ENST00000595689 SYNJ1O43426 1573 aa10.44□□□□□ -0.74
SSX4-201ENST00000595689 PBRM1Q86U86 1689 aa10.44□□□□□ -0.74
SSX4-201ENST00000595689 TOP2BQ02880 1626 aa10.43□□□□□ -0.74
SSX4-201ENST00000595689 SNAPC4Q5SXM2 1469 aa10.42□□□□□ -0.74
SSX4-201ENST00000595689 ABCA5Q8WWZ7 1642 aa10.42□□□□□ -0.74
SSX4-201ENST00000595689 RIMBP3CA6NJZ7 1639 aa10.41□□□□□ -0.74
SSX4-201ENST00000595689 RIMBP3BA6NNM3 1639 aa10.41□□□□□ -0.74
SSX4-201ENST00000595689 RIMBP3Q9UFD9 1639 aa10.41□□□□□ -0.74
SSX4-201ENST00000595689 ABCA10Q8WWZ4 1543 aa10.41□□□□□ -0.74
SSX4-201ENST00000595689 WRNQ14191 1432 aaPredicted RBP eCLIP10.41□□□□□ -0.74
SSX4-201ENST00000595689 GRIN2BQ13224 1484 aa10.39□□□□□ -0.75
SSX4-201ENST00000595689 GAPVD1Q14C86 1478 aa10.38□□□□□ -0.75
SSX4-201ENST00000595689 MAGI1Q96QZ7 1491 aaPredicted RBP10.38□□□□□ -0.75
SSX4-201ENST00000595689 TRIM41Q8WV44 630 aa10.37□□□□□ -0.75
SSX4-201ENST00000595689 ARHGEF11O15085 1522 aa10.37□□□□□ -0.75
SSX4-201ENST00000595689 FBLN2P98095 1184 aa10.36□□□□□ -0.75
SSX4-201ENST00000595689 CLASP1Q7Z460 1538 aa10.35□□□□□ -0.75
SSX4-201ENST00000595689 ADRA2BP18089 450 aa10.35□□□□□ -0.75
SSX4-201ENST00000595689 PIAS4Q8N2W9 510 aaPredicted RBP10.35□□□□□ -0.75
SSX4-201ENST00000595689 SYNJ2O15056 1496 aa10.35□□□□□ -0.75
SSX4-201ENST00000595689 ADAMTS12P58397 1594 aa10.33□□□□□ -0.76
SSX4-201ENST00000595689 PPP6R1Q9UPN7 881 aa10.31□□□□□ -0.76
SSX4-201ENST00000595689 CHMP7Q8WUX9 453 aaPredicted RBP10.3□□□□□ -0.76
SSX4-201ENST00000595689 ARAP1Q96P48 1450 aa10.29□□□□□ -0.76
SSX4-201ENST00000595689 ERICH3Q5RHP9 1530 aa10.28□□□□□ -0.76
SSX4-201ENST00000595689 GRIN2AQ12879 1464 aa10.27□□□□□ -0.77
SSX4-201ENST00000595689 CEP170Q5SW79 1584 aa10.26□□□□□ -0.77
SSX4-201ENST00000595689 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms