RNA–Protein interactions for RNA: ENST00000595577.1

C3-205, Transcript of complement C3, humanhuman

TSL 2

Gene C3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3-205ENST00000595577 NISCHQ9Y2I1 1504 aa31.03■■■□□ 2.56
C3-205ENST00000595577 ABCC9O60706 1549 aa28■■■□□ 2.07
C3-205ENST00000595577 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
C3-205ENST00000595577 RB1CC1Q8TDY2 1594 aa26.64■■□□□ 1.86
C3-205ENST00000595577 NACADO15069 1562 aa26.41■■□□□ 1.82
C3-205ENST00000595577 DNAJC5BQ9UF47 199 aa26.29■■□□□ 1.8
C3-205ENST00000595577 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
C3-205ENST00000595577 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
C3-205ENST00000595577 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.75
C3-205ENST00000595577 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
C3-205ENST00000595577 BICRAQ9NZM4 1560 aa25.85■■□□□ 1.73
C3-205ENST00000595577 ZCCHC6Q5VYS8 1495 aaKnown RBP25.7■■□□□ 1.7
C3-205ENST00000595577 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
C3-205ENST00000595577 SHROOM4Q9ULL8 1493 aa25.49■■□□□ 1.67
C3-205ENST00000595577 SCRIBQ14160 1630 aa25.45■■□□□ 1.67
C3-205ENST00000595577 CC2D2AQ9P2K1 1620 aa25.31■■□□□ 1.64
C3-205ENST00000595577 EIF4G1Q04637 1599 aaKnown RBP25.23■■□□□ 1.63
C3-205ENST00000595577 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
C3-205ENST00000595577 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
C3-205ENST00000595577 SMARCA4P51532 1647 aa24.27■■□□□ 1.48
C3-205ENST00000595577 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
C3-205ENST00000595577 DNAJC5Q9H3Z4 198 aa24.24■■□□□ 1.47
C3-205ENST00000595577 SMARCA2P51531 1590 aa24.23■■□□□ 1.47
C3-205ENST00000595577 HMGXB3Q12766 1538 aa24.2■■□□□ 1.47
C3-205ENST00000595577 ERCC6Q03468 1493 aa24.2■■□□□ 1.47
C3-205ENST00000595577 CUX2O14529 1486 aa24.19■■□□□ 1.46
C3-205ENST00000595577 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
C3-205ENST00000595577 BAZ1BQ9UIG0 1483 aaKnown RBP24.06■■□□□ 1.44
C3-205ENST00000595577 NESP48681 1621 aa24.02■■□□□ 1.44
C3-205ENST00000595577 PEG3Q9GZU2 1588 aa24.01■■□□□ 1.43
C3-205ENST00000595577 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
C3-205ENST00000595577 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
C3-205ENST00000595577 THOC2Q8NI27 1593 aaKnown RBP23.84■■□□□ 1.41
C3-205ENST00000595577 KIF21AQ7Z4S6 1674 aa23.79■■□□□ 1.4
C3-205ENST00000595577 PDS5BQ9NTI5 1447 aa23.7■■□□□ 1.38
C3-205ENST00000595577 WIZO95785 1651 aa23.66■■□□□ 1.38
C3-205ENST00000595577 CADPSQ9ULU8 1353 aa23.6■■□□□ 1.37
C3-205ENST00000595577 MRC2Q9UBG0 1479 aa23.51■■□□□ 1.35
C3-205ENST00000595577 WDR62O43379 1518 aa23.47■■□□□ 1.35
C3-205ENST00000595577 SUPT5HO00267 1087 aaKnown RBP23.44■■□□□ 1.34
C3-205ENST00000595577 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
C3-205ENST00000595577 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
C3-205ENST00000595577 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
C3-205ENST00000595577 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.33
C3-205ENST00000595577 CFTRP13569 1480 aa23.32■■□□□ 1.32
C3-205ENST00000595577 PRDM2Q13029 1718 aa23.21■■□□□ 1.31
C3-205ENST00000595577 TRIM41Q8WV44 630 aa23.17■■□□□ 1.3
C3-205ENST00000595577 URB2Q14146 1524 aaKnown RBP23.17■■□□□ 1.3
C3-205ENST00000595577 CCDC88BA6NC98 1476 aa23.04■■□□□ 1.28
C3-205ENST00000595577 OSCARQ8IYS5 282 aa23.03■■□□□ 1.28
C3-205ENST00000595577 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
C3-205ENST00000595577 TOPBP1Q92547 1522 aa22.91■■□□□ 1.26
C3-205ENST00000595577 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.26
C3-205ENST00000595577 ABCC8Q09428 1581 aa22.85■■□□□ 1.25
C3-205ENST00000595577 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
C3-205ENST00000595577 EIF4G3O43432 1585 aaKnown RBP22.82■■□□□ 1.24
C3-205ENST00000595577 RIMBP3CA6NJZ7 1639 aa22.81■■□□□ 1.24
C3-205ENST00000595577 RIMBP3BA6NNM3 1639 aa22.81■■□□□ 1.24
C3-205ENST00000595577 RIMBP3Q9UFD9 1639 aa22.81■■□□□ 1.24
C3-205ENST00000595577 TARBP1Q13395 1621 aaKnown RBP22.74■■□□□ 1.23
C3-205ENST00000595577 CHD1O14646 1710 aa22.71■■□□□ 1.23
C3-205ENST00000595577 ARHGEF11O15085 1522 aa22.7■■□□□ 1.22
C3-205ENST00000595577 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.227e-12■■■■■ 43.7
C3-205ENST00000595577 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
C3-205ENST00000595577 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
C3-205ENST00000595577 FBLN2P98095 1184 aa22.54■■□□□ 1.2
C3-205ENST00000595577 SOGA1O94964 1423 aa22.54■■□□□ 1.2
C3-205ENST00000595577 FGD5Q6ZNL6 1462 aa22.52■■□□□ 1.2
C3-205ENST00000595577 WDR97A6NE52 1622 aa22.51■■□□□ 1.19
C3-205ENST00000595577 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
C3-205ENST00000595577 CYB5RLQ6IPT4 315 aa22.5■■□□□ 1.19
C3-205ENST00000595577 CUX1P39880 1505 aa22.47■■□□□ 1.19
C3-205ENST00000595577 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
C3-205ENST00000595577 SNAPC4Q5SXM2 1469 aa22.46■■□□□ 1.19
C3-205ENST00000595577 ARAP1Q96P48 1450 aa22.46■■□□□ 1.19
C3-205ENST00000595577 MAGI1Q96QZ7 1491 aaPredicted RBP22.4■■□□□ 1.18
C3-205ENST00000595577 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
C3-205ENST00000595577 GRIN2BQ13224 1484 aa22.38■■□□□ 1.17
C3-205ENST00000595577 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
C3-205ENST00000595577 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
C3-205ENST00000595577 CHMP7Q8WUX9 453 aaPredicted RBP22.36■■□□□ 1.17
C3-205ENST00000595577 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
C3-205ENST00000595577 TRHP20396 242 aaPredicted RBP22.3■■□□□ 1.16
C3-205ENST00000595577 GAPVD1Q14C86 1478 aa22.28■■□□□ 1.16
C3-205ENST00000595577 ABCA5Q8WWZ7 1642 aa22.25■■□□□ 1.15
C3-205ENST00000595577 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
C3-205ENST00000595577 BIVM-ERCC5R4GMW8 1640 aa22.13■■□□□ 1.13
C3-205ENST00000595577 WRNQ14191 1432 aaPredicted RBP eCLIP22.13■■□□□ 1.13
C3-205ENST00000595577 TOP2BQ02880 1626 aa22.11■■□□□ 1.13
C3-205ENST00000595577 ADAMTS12P58397 1594 aa22.1■■□□□ 1.13
C3-205ENST00000595577 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
C3-205ENST00000595577 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
C3-205ENST00000595577 ERCC6L2Q5T890 1561 aa22.02■■□□□ 1.12
C3-205ENST00000595577 NUP160Q12769 1436 aa22.01■■□□□ 1.11
C3-205ENST00000595577 FHAD1B1AJZ9 1412 aa21.98■■□□□ 1.11
C3-205ENST00000595577 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
C3-205ENST00000595577 SHROOM2Q13796 1616 aa21.96■■□□□ 1.11
C3-205ENST00000595577 PRG4Q92954 1404 aaPredicted RBP21.8■■□□□ 1.08
C3-205ENST00000595577 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
C3-205ENST00000595577 KIF13AQ9H1H9 1805 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms