RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 NISCHQ9Y2I1 1504 aa14.56□□□□□ -0.08
SSX4B-201ENST00000595235 AEBP2Q6ZN18 517 aaPredicted RBP13.78□□□□□ -0.2
SSX4B-201ENST00000595235 CHIC1Q5VXU3 224 aa13.3□□□□□ -0.28
SSX4B-201ENST00000595235 CCDC180Q9P1Z9 1646 aa13.04□□□□□ -0.32
SSX4B-201ENST00000595235 ABCC9O60706 1549 aa12.85□□□□□ -0.35
SSX4B-201ENST00000595235 RB1CC1Q8TDY2 1594 aa12.3□□□□□ -0.44
SSX4B-201ENST00000595235 NACADO15069 1562 aa12.25□□□□□ -0.45
SSX4B-201ENST00000595235 DCAF8L2P0C7V8 631 aa12.15□□□□□ -0.46
SSX4B-201ENST00000595235 ZCCHC6Q5VYS8 1495 aaKnown RBP12.13□□□□□ -0.47
SSX4B-201ENST00000595235 MYO15BQ96JP2 1530 aa12.12□□□□□ -0.47
SSX4B-201ENST00000595235 UNC13AQ9UPW8 1703 aa12.11□□□□□ -0.47
SSX4B-201ENST00000595235 DCAF1Q9Y4B6 1507 aa12.04□□□□□ -0.48
SSX4B-201ENST00000595235 BICRAQ9NZM4 1560 aa11.97□□□□□ -0.49
SSX4B-201ENST00000595235 PABPN1Q86U42 306 aaKnown RBP eCLIP11.95□□□□□ -0.5
SSX4B-201ENST00000595235 SCRIBQ14160 1630 aa11.89□□□□□ -0.51
SSX4B-201ENST00000595235 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
SSX4B-201ENST00000595235 SENP3Q9H4L4 574 aaPredicted RBP11.83□□□□□ -0.52
SSX4B-201ENST00000595235 SHROOM4Q9ULL8 1493 aa11.78□□□□□ -0.52
SSX4B-201ENST00000595235 PHF23Q9BUL5 403 aaPredicted RBP11.65□□□□□ -0.54
SSX4B-201ENST00000595235 EIF4G1Q04637 1599 aaKnown RBP11.65□□□□□ -0.54
SSX4B-201ENST00000595235 CC2D2AQ9P2K1 1620 aa11.64□□□□□ -0.55
SSX4B-201ENST00000595235 CECR2Q9BXF3 1484 aa11.54□□□□□ -0.56
SSX4B-201ENST00000595235 SMARCA4P51532 1647 aa11.35□□□□□ -0.59
SSX4B-201ENST00000595235 BAZ1AQ9NRL2 1556 aaPredicted RBP11.29□□□□□ -0.6
SSX4B-201ENST00000595235 NCAPD3P42695 1498 aa11.29□□□□□ -0.6
SSX4B-201ENST00000595235 ATAD2BQ9ULI0 1458 aa11.29□□□□□ -0.6
SSX4B-201ENST00000595235 SMARCA2P51531 1590 aa11.27□□□□□ -0.61
SSX4B-201ENST00000595235 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
SSX4B-201ENST00000595235 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
SSX4B-201ENST00000595235 PEG3Q9GZU2 1588 aa11.23□□□□□ -0.61
SSX4B-201ENST00000595235 BAZ1BQ9UIG0 1483 aaKnown RBP11.19□□□□□ -0.62
SSX4B-201ENST00000595235 WIZO95785 1651 aa11.14□□□□□ -0.63
SSX4B-201ENST00000595235 NESP48681 1621 aa11.1□□□□□ -0.63
SSX4B-201ENST00000595235 ERCC6Q03468 1493 aa11.06□□□□□ -0.64
SSX4B-201ENST00000595235 RSF1Q96T23 1441 aaPredicted RBP11.04□□□□□ -0.64
SSX4B-201ENST00000595235 LAMC3Q9Y6N6 1575 aa11.03□□□□□ -0.64
SSX4B-201ENST00000595235 KIF21AQ7Z4S6 1674 aa11□□□□□ -0.65
SSX4B-201ENST00000595235 CUX2O14529 1486 aa11□□□□□ -0.65
SSX4B-201ENST00000595235 THOC2Q8NI27 1593 aaKnown RBP10.99□□□□□ -0.65
SSX4B-201ENST00000595235 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
SSX4B-201ENST00000595235 CADPSQ9ULU8 1353 aa10.94□□□□□ -0.66
SSX4B-201ENST00000595235 FOXD1Q16676 465 aa10.94□□□□□ -0.66
SSX4B-201ENST00000595235 PDS5BQ9NTI5 1447 aa10.92□□□□□ -0.66
SSX4B-201ENST00000595235 CFTRP13569 1480 aa10.87□□□□□ -0.67
SSX4B-201ENST00000595235 PRDM2Q13029 1718 aa10.86□□□□□ -0.67
SSX4B-201ENST00000595235 MRC2Q9UBG0 1479 aa10.86□□□□□ -0.67
SSX4B-201ENST00000595235 WDR62O43379 1518 aa10.84□□□□□ -0.67
SSX4B-201ENST00000595235 CCDC88BA6NC98 1476 aa10.84□□□□□ -0.67
SSX4B-201ENST00000595235 FANCD2Q9BXW9 1451 aa10.84□□□□□ -0.67
SSX4B-201ENST00000595235 CEP164Q9UPV0 1460 aa10.84□□□□□ -0.67
SSX4B-201ENST00000595235 DNAJC5Q9H3Z4 198 aa10.77□□□□□ -0.69
SSX4B-201ENST00000595235 URB2Q14146 1524 aaKnown RBP10.77□□□□□ -0.69
SSX4B-201ENST00000595235 PLPPR3Q6T4P5 718 aa10.76□□□□□ -0.69
SSX4B-201ENST00000595235 TOPBP1Q92547 1522 aa10.67□□□□□ -0.7
SSX4B-201ENST00000595235 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.7
SSX4B-201ENST00000595235 SUPT5HO00267 1087 aaKnown RBP10.63□□□□□ -0.71
SSX4B-201ENST00000595235 ABCC8Q09428 1581 aa10.61□□□□□ -0.71
SSX4B-201ENST00000595235 ZNF608Q9ULD9 1512 aaPredicted RBP10.61□□□□□ -0.71
SSX4B-201ENST00000595235 IFT140Q96RY7 1462 aa10.61□□□□□ -0.71
SSX4B-201ENST00000595235 TARBP1Q13395 1621 aaKnown RBP10.58□□□□□ -0.72
SSX4B-201ENST00000595235 EIF4G3O43432 1585 aaKnown RBP10.58□□□□□ -0.72
SSX4B-201ENST00000595235 POLA1P09884 1462 aaPredicted RBP10.57□□□□□ -0.72
SSX4B-201ENST00000595235 CUX1P39880 1505 aa10.56□□□□□ -0.72
SSX4B-201ENST00000595235 FGD5Q6ZNL6 1462 aa10.53□□□□□ -0.72
SSX4B-201ENST00000595235 RAD54L2Q9Y4B4 1467 aa10.53□□□□□ -0.72
SSX4B-201ENST00000595235 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
SSX4B-201ENST00000595235 AQRO60306 1485 aaKnown RBP eCLIP10.5□□□□□ -0.73
SSX4B-201ENST00000595235 CHD1O14646 1710 aa10.49□□□□□ -0.73
SSX4B-201ENST00000595235 SOGA1O94964 1423 aa10.49□□□□□ -0.73
SSX4B-201ENST00000595235 OSCARQ8IYS5 282 aa10.46□□□□□ -0.73
SSX4B-201ENST00000595235 BIVM-ERCC5R4GMW8 1640 aa10.45□□□□□ -0.74
SSX4B-201ENST00000595235 TDRD9Q8NDG6 1382 aaKnown RBP10.45□□□□□ -0.74
SSX4B-201ENST00000595235 SYNJ1O43426 1573 aa10.44□□□□□ -0.74
SSX4B-201ENST00000595235 PBRM1Q86U86 1689 aa10.44□□□□□ -0.74
SSX4B-201ENST00000595235 TOP2BQ02880 1626 aa10.43□□□□□ -0.74
SSX4B-201ENST00000595235 SNAPC4Q5SXM2 1469 aa10.42□□□□□ -0.74
SSX4B-201ENST00000595235 ABCA5Q8WWZ7 1642 aa10.42□□□□□ -0.74
SSX4B-201ENST00000595235 RIMBP3CA6NJZ7 1639 aa10.41□□□□□ -0.74
SSX4B-201ENST00000595235 RIMBP3BA6NNM3 1639 aa10.41□□□□□ -0.74
SSX4B-201ENST00000595235 RIMBP3Q9UFD9 1639 aa10.41□□□□□ -0.74
SSX4B-201ENST00000595235 ABCA10Q8WWZ4 1543 aa10.41□□□□□ -0.74
SSX4B-201ENST00000595235 WRNQ14191 1432 aaPredicted RBP eCLIP10.41□□□□□ -0.74
SSX4B-201ENST00000595235 GRIN2BQ13224 1484 aa10.39□□□□□ -0.75
SSX4B-201ENST00000595235 GAPVD1Q14C86 1478 aa10.38□□□□□ -0.75
SSX4B-201ENST00000595235 MAGI1Q96QZ7 1491 aaPredicted RBP10.38□□□□□ -0.75
SSX4B-201ENST00000595235 TRIM41Q8WV44 630 aa10.37□□□□□ -0.75
SSX4B-201ENST00000595235 ARHGEF11O15085 1522 aa10.37□□□□□ -0.75
SSX4B-201ENST00000595235 FBLN2P98095 1184 aa10.36□□□□□ -0.75
SSX4B-201ENST00000595235 CLASP1Q7Z460 1538 aa10.35□□□□□ -0.75
SSX4B-201ENST00000595235 ADRA2BP18089 450 aa10.35□□□□□ -0.75
SSX4B-201ENST00000595235 PIAS4Q8N2W9 510 aaPredicted RBP10.35□□□□□ -0.75
SSX4B-201ENST00000595235 SYNJ2O15056 1496 aa10.35□□□□□ -0.75
SSX4B-201ENST00000595235 ADAMTS12P58397 1594 aa10.33□□□□□ -0.76
SSX4B-201ENST00000595235 PPP6R1Q9UPN7 881 aa10.31□□□□□ -0.76
SSX4B-201ENST00000595235 CHMP7Q8WUX9 453 aaPredicted RBP10.3□□□□□ -0.76
SSX4B-201ENST00000595235 ARAP1Q96P48 1450 aa10.29□□□□□ -0.76
SSX4B-201ENST00000595235 ERICH3Q5RHP9 1530 aa10.28□□□□□ -0.76
SSX4B-201ENST00000595235 GRIN2AQ12879 1464 aa10.27□□□□□ -0.77
SSX4B-201ENST00000595235 CEP170Q5SW79 1584 aa10.26□□□□□ -0.77
SSX4B-201ENST00000595235 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms