RNA–Protein interactions for RNA: ENST00000594329.5

LINC01828-205, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5 BASIC

Gene LINC01828, Length 863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-205ENST00000594329 NISCHQ9Y2I1 1504 aa28.52■■■□□ 2.16
LINC01828-205ENST00000594329 ABCC9O60706 1549 aa25.58■■□□□ 1.69
LINC01828-205ENST00000594329 CCDC180Q9P1Z9 1646 aa25.34■■□□□ 1.65
LINC01828-205ENST00000594329 RB1CC1Q8TDY2 1594 aa24.21■■□□□ 1.47
LINC01828-205ENST00000594329 DCAF8L2P0C7V8 631 aa24.1■■□□□ 1.45
LINC01828-205ENST00000594329 DNAJC5BQ9UF47 199 aa24.07■■□□□ 1.44
LINC01828-205ENST00000594329 NACADO15069 1562 aa23.99■■□□□ 1.43
LINC01828-205ENST00000594329 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.41
LINC01828-205ENST00000594329 MYO15BQ96JP2 1530 aa23.77■■□□□ 1.4
LINC01828-205ENST00000594329 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
LINC01828-205ENST00000594329 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.39
LINC01828-205ENST00000594329 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
LINC01828-205ENST00000594329 BICRAQ9NZM4 1560 aa23.51■■□□□ 1.35
LINC01828-205ENST00000594329 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
LINC01828-205ENST00000594329 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
LINC01828-205ENST00000594329 CC2D2AQ9P2K1 1620 aa23.05■■□□□ 1.28
LINC01828-205ENST00000594329 CECR2Q9BXF3 1484 aa23.01■■□□□ 1.27
LINC01828-205ENST00000594329 EIF4G1Q04637 1599 aaKnown RBP22.95■■□□□ 1.26
LINC01828-205ENST00000594329 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
LINC01828-205ENST00000594329 DNAJC5Q9H3Z4 198 aa22.11■■□□□ 1.13
LINC01828-205ENST00000594329 ATAD2BQ9ULI0 1458 aa22.1■■□□□ 1.13
LINC01828-205ENST00000594329 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
LINC01828-205ENST00000594329 BAZ1AQ9NRL2 1556 aaPredicted RBP22.08■■□□□ 1.13
LINC01828-205ENST00000594329 SMARCA4P51532 1647 aa22.07■■□□□ 1.12
LINC01828-205ENST00000594329 SMARCA2P51531 1590 aa22.02■■□□□ 1.12
LINC01828-205ENST00000594329 CUX2O14529 1486 aa21.96■■□□□ 1.11
LINC01828-205ENST00000594329 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
LINC01828-205ENST00000594329 NESP48681 1621 aa21.95■■□□□ 1.1
LINC01828-205ENST00000594329 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
LINC01828-205ENST00000594329 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
LINC01828-205ENST00000594329 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
LINC01828-205ENST00000594329 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
LINC01828-205ENST00000594329 LAMC3Q9Y6N6 1575 aa21.67■■□□□ 1.06
LINC01828-205ENST00000594329 THOC2Q8NI27 1593 aaKnown RBP21.66■■□□□ 1.06
LINC01828-205ENST00000594329 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
LINC01828-205ENST00000594329 WIZO95785 1651 aa21.6■■□□□ 1.05
LINC01828-205ENST00000594329 PDS5BQ9NTI5 1447 aa21.58■■□□□ 1.05
LINC01828-205ENST00000594329 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
LINC01828-205ENST00000594329 TOP2AP11388 1531 aaKnown RBP21.46■■□□□ 1.03
LINC01828-205ENST00000594329 MRC2Q9UBG0 1479 aa21.41■■□□□ 1.02
LINC01828-205ENST00000594329 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
LINC01828-205ENST00000594329 WDR62O43379 1518 aa21.32■■□□□ 1
LINC01828-205ENST00000594329 SUPT5HO00267 1087 aaKnown RBP21.31■■□□□ 1
LINC01828-205ENST00000594329 FANCD2Q9BXW9 1451 aa21.29■■□□□ 1
LINC01828-205ENST00000594329 TRIM41Q8WV44 630 aa21.27■■□□□ 1
LINC01828-205ENST00000594329 CCDC88BA6NC98 1476 aa21.26■□□□□ 0.99
LINC01828-205ENST00000594329 CFTRP13569 1480 aa21.24■□□□□ 0.99
LINC01828-205ENST00000594329 URB2Q14146 1524 aaKnown RBP21.13■□□□□ 0.97
LINC01828-205ENST00000594329 OSCARQ8IYS5 282 aa21.03■□□□□ 0.96
LINC01828-205ENST00000594329 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
LINC01828-205ENST00000594329 ZNF608Q9ULD9 1512 aaPredicted RBP20.9■□□□□ 0.94
LINC01828-205ENST00000594329 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
LINC01828-205ENST00000594329 IFT140Q96RY7 1462 aa20.87■□□□□ 0.93
LINC01828-205ENST00000594329 ABCC8Q09428 1581 aa20.83■□□□□ 0.92
LINC01828-205ENST00000594329 DNMBPQ6XZF7 1577 aa20.77■□□□□ 0.92
LINC01828-205ENST00000594329 RIMBP3CA6NJZ7 1639 aa20.77■□□□□ 0.92
LINC01828-205ENST00000594329 RIMBP3BA6NNM3 1639 aa20.77■□□□□ 0.92
LINC01828-205ENST00000594329 RIMBP3Q9UFD9 1639 aa20.77■□□□□ 0.92
LINC01828-205ENST00000594329 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
LINC01828-205ENST00000594329 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.91
LINC01828-205ENST00000594329 FBLN2P98095 1184 aa20.69■□□□□ 0.9
LINC01828-205ENST00000594329 TARBP1Q13395 1621 aaKnown RBP20.67■□□□□ 0.9
LINC01828-205ENST00000594329 ARHGEF11O15085 1522 aa20.67■□□□□ 0.9
LINC01828-205ENST00000594329 CHD1O14646 1710 aa20.66■□□□□ 0.9
LINC01828-205ENST00000594329 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
LINC01828-205ENST00000594329 RAD54L2Q9Y4B4 1467 aa20.63■□□□□ 0.89
LINC01828-205ENST00000594329 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
LINC01828-205ENST00000594329 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
LINC01828-205ENST00000594329 SOGA1O94964 1423 aa20.58■□□□□ 0.88
LINC01828-205ENST00000594329 CUX1P39880 1505 aa20.55■□□□□ 0.88
LINC01828-205ENST00000594329 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
LINC01828-205ENST00000594329 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
LINC01828-205ENST00000594329 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
LINC01828-205ENST00000594329 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
LINC01828-205ENST00000594329 TRHP20396 242 aaPredicted RBP20.45■□□□□ 0.86
LINC01828-205ENST00000594329 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
LINC01828-205ENST00000594329 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
LINC01828-205ENST00000594329 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
LINC01828-205ENST00000594329 WDR97A6NE52 1622 aa20.37■□□□□ 0.85
LINC01828-205ENST00000594329 MAGI1Q96QZ7 1491 aaPredicted RBP20.36■□□□□ 0.85
LINC01828-205ENST00000594329 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
LINC01828-205ENST00000594329 SYNJ1O43426 1573 aa20.35■□□□□ 0.85
LINC01828-205ENST00000594329 CLASP1Q7Z460 1538 aa20.34■□□□□ 0.85
LINC01828-205ENST00000594329 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
LINC01828-205ENST00000594329 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
LINC01828-205ENST00000594329 SYNJ2O15056 1496 aa20.31■□□□□ 0.84
LINC01828-205ENST00000594329 GAPVD1Q14C86 1478 aa20.31■□□□□ 0.84
LINC01828-205ENST00000594329 ABCA5Q8WWZ7 1642 aa20.23■□□□□ 0.83
LINC01828-205ENST00000594329 KIF27Q86VH2 1401 aa20.14■□□□□ 0.81
LINC01828-205ENST00000594329 GRIN2AQ12879 1464 aa20.12■□□□□ 0.81
LINC01828-205ENST00000594329 ERCC6L2Q5T890 1561 aa20.1■□□□□ 0.81
LINC01828-205ENST00000594329 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
LINC01828-205ENST00000594329 IGF1RP08069 1367 aa20.09■□□□□ 0.81
LINC01828-205ENST00000594329 ADAMTS12P58397 1594 aa20.09■□□□□ 0.81
LINC01828-205ENST00000594329 CEP170Q5SW79 1584 aa20.07■□□□□ 0.8
LINC01828-205ENST00000594329 FHAD1B1AJZ9 1412 aa20.06■□□□□ 0.8
LINC01828-205ENST00000594329 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
LINC01828-205ENST00000594329 NUP160Q12769 1436 aa20.02■□□□□ 0.79
LINC01828-205ENST00000594329 SHROOM2Q13796 1616 aa19.94■□□□□ 0.78
LINC01828-205ENST00000594329 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms