RNA–Protein interactions for RNA: ENST00000594315.1

PCAT19-202, prostate cancer associated transcript 19, humanhuman

TSL 1 (best)

Gene PCAT19, Length 1,062 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT19-202ENST00000594315 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
PCAT19-202ENST00000594315 CHIC1Q5VXU3 224 aa22.43■■□□□ 1.18
PCAT19-202ENST00000594315 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
PCAT19-202ENST00000594315 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
PCAT19-202ENST00000594315 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
PCAT19-202ENST00000594315 CCDC180Q9P1Z9 1646 aa19.77■□□□□ 0.76
PCAT19-202ENST00000594315 ABCC9O60706 1549 aa19.73■□□□□ 0.75
PCAT19-202ENST00000594315 FOXD1Q16676 465 aa19.19■□□□□ 0.66
PCAT19-202ENST00000594315 RB1CC1Q8TDY2 1594 aa18.85■□□□□ 0.61
PCAT19-202ENST00000594315 NACADO15069 1562 aa18.73■□□□□ 0.59
PCAT19-202ENST00000594315 DCAF8L2P0C7V8 631 aa18.66■□□□□ 0.58
PCAT19-202ENST00000594315 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
PCAT19-202ENST00000594315 DNAJC5BQ9UF47 199 aa18.42■□□□□ 0.54
PCAT19-202ENST00000594315 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
PCAT19-202ENST00000594315 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
PCAT19-202ENST00000594315 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
PCAT19-202ENST00000594315 POTEDQ86YR6 584 aa18.25■□□□□ 0.51
PCAT19-202ENST00000594315 UNC13AQ9UPW8 1703 aa18.24■□□□□ 0.51
PCAT19-202ENST00000594315 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
PCAT19-202ENST00000594315 SHROOM4Q9ULL8 1493 aa18.11■□□□□ 0.49
PCAT19-202ENST00000594315 MSH5O43196 834 aa17.99■□□□□ 0.47
PCAT19-202ENST00000594315 SCRIBQ14160 1630 aa17.98■□□□□ 0.47
PCAT19-202ENST00000594315 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
PCAT19-202ENST00000594315 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
PCAT19-202ENST00000594315 CECR2Q9BXF3 1484 aa17.8■□□□□ 0.44
PCAT19-202ENST00000594315 PIAS4Q8N2W9 510 aaPredicted RBP17.79■□□□□ 0.44
PCAT19-202ENST00000594315 PPP6R1Q9UPN7 881 aa17.72■□□□□ 0.43
PCAT19-202ENST00000594315 PLPPR3Q6T4P5 718 aa17.71■□□□□ 0.43
PCAT19-202ENST00000594315 ADRA2BP18089 450 aa17.62■□□□□ 0.41
PCAT19-202ENST00000594315 NCAPD3P42695 1498 aa17.29■□□□□ 0.36
PCAT19-202ENST00000594315 ATAD2BQ9ULI0 1458 aa17.21■□□□□ 0.35
PCAT19-202ENST00000594315 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
PCAT19-202ENST00000594315 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
PCAT19-202ENST00000594315 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
PCAT19-202ENST00000594315 HMGXB3Q12766 1538 aa17.15■□□□□ 0.34
PCAT19-202ENST00000594315 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
PCAT19-202ENST00000594315 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
PCAT19-202ENST00000594315 CUX2O14529 1486 aa17.05■□□□□ 0.32
PCAT19-202ENST00000594315 PEG3Q9GZU2 1588 aa17.03■□□□□ 0.32
PCAT19-202ENST00000594315 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
PCAT19-202ENST00000594315 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
PCAT19-202ENST00000594315 NESP48681 1621 aa16.92■□□□□ 0.3
PCAT19-202ENST00000594315 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.3
PCAT19-202ENST00000594315 PDS5BQ9NTI5 1447 aa16.84■□□□□ 0.29
PCAT19-202ENST00000594315 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.28
PCAT19-202ENST00000594315 THOC2Q8NI27 1593 aaKnown RBP16.75■□□□□ 0.27
PCAT19-202ENST00000594315 WIZO95785 1651 aa16.72■□□□□ 0.27
PCAT19-202ENST00000594315 KIF21AQ7Z4S6 1674 aa16.68■□□□□ 0.26
PCAT19-202ENST00000594315 RSF1Q96T23 1441 aaPredicted RBP16.65■□□□□ 0.26
PCAT19-202ENST00000594315 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
PCAT19-202ENST00000594315 CEP164Q9UPV0 1460 aa16.6■□□□□ 0.25
PCAT19-202ENST00000594315 TOP2AP11388 1531 aaKnown RBP16.59■□□□□ 0.25
PCAT19-202ENST00000594315 WDR62O43379 1518 aa16.58■□□□□ 0.24
PCAT19-202ENST00000594315 CFTRP13569 1480 aa16.57■□□□□ 0.24
PCAT19-202ENST00000594315 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
PCAT19-202ENST00000594315 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
PCAT19-202ENST00000594315 URB2Q14146 1524 aaKnown RBP16.37■□□□□ 0.21
PCAT19-202ENST00000594315 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
PCAT19-202ENST00000594315 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
PCAT19-202ENST00000594315 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
PCAT19-202ENST00000594315 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
PCAT19-202ENST00000594315 IFT140Q96RY7 1462 aa16.27■□□□□ 0.19
PCAT19-202ENST00000594315 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
PCAT19-202ENST00000594315 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
PCAT19-202ENST00000594315 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
PCAT19-202ENST00000594315 DNMBPQ6XZF7 1577 aa16.18■□□□□ 0.18
PCAT19-202ENST00000594315 ZNF608Q9ULD9 1512 aaPredicted RBP16.15■□□□□ 0.18
PCAT19-202ENST00000594315 EIF4G3O43432 1585 aaKnown RBP16.09■□□□□ 0.17
PCAT19-202ENST00000594315 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
PCAT19-202ENST00000594315 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
PCAT19-202ENST00000594315 AQRO60306 1485 aaKnown RBP eCLIP16.04■□□□□ 0.16
PCAT19-202ENST00000594315 SOGA1O94964 1423 aa16.03■□□□□ 0.16
PCAT19-202ENST00000594315 FBLN2P98095 1184 aa16■□□□□ 0.15
PCAT19-202ENST00000594315 RAD54L2Q9Y4B4 1467 aa15.98■□□□□ 0.15
PCAT19-202ENST00000594315 WDR97A6NE52 1622 aa15.98■□□□□ 0.15
PCAT19-202ENST00000594315 RIMBP3CA6NJZ7 1639 aa15.98■□□□□ 0.15
PCAT19-202ENST00000594315 RIMBP3BA6NNM3 1639 aa15.98■□□□□ 0.15
PCAT19-202ENST00000594315 RIMBP3Q9UFD9 1639 aa15.98■□□□□ 0.15
PCAT19-202ENST00000594315 SCAF1Q9H7N4 1312 aaKnown RBP15.97■□□□□ 0.15
PCAT19-202ENST00000594315 ARHGEF11O15085 1522 aa15.97■□□□□ 0.15
PCAT19-202ENST00000594315 TDRD9Q8NDG6 1382 aaKnown RBP15.97■□□□□ 0.15
PCAT19-202ENST00000594315 FGD5Q6ZNL6 1462 aa15.97■□□□□ 0.15
PCAT19-202ENST00000594315 SUPT5HO00267 1087 aaKnown RBP15.96■□□□□ 0.15
PCAT19-202ENST00000594315 CUX1P39880 1505 aa15.93■□□□□ 0.14
PCAT19-202ENST00000594315 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
PCAT19-202ENST00000594315 CHD1O14646 1710 aa15.91■□□□□ 0.14
PCAT19-202ENST00000594315 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
PCAT19-202ENST00000594315 MAGI1Q96QZ7 1491 aaPredicted RBP15.9■□□□□ 0.14
PCAT19-202ENST00000594315 CYB5RLQ6IPT4 315 aa15.89■□□□□ 0.13
PCAT19-202ENST00000594315 SNAPC4Q5SXM2 1469 aa15.89■□□□□ 0.13
PCAT19-202ENST00000594315 SYNJ2O15056 1496 aa15.84■□□□□ 0.13
PCAT19-202ENST00000594315 SYNJ1O43426 1573 aa15.83■□□□□ 0.13
PCAT19-202ENST00000594315 GAPVD1Q14C86 1478 aa15.83■□□□□ 0.12
PCAT19-202ENST00000594315 ABCA10Q8WWZ4 1543 aa15.81■□□□□ 0.12
PCAT19-202ENST00000594315 ARAP1Q96P48 1450 aa15.79■□□□□ 0.12
PCAT19-202ENST00000594315 WRNQ14191 1432 aaPredicted RBP eCLIP15.79■□□□□ 0.129e-7■■■■■ 55.5
PCAT19-202ENST00000594315 CLASP1Q7Z460 1538 aa15.78■□□□□ 0.12
PCAT19-202ENST00000594315 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
PCAT19-202ENST00000594315 PBRM1Q86U86 1689 aa15.74■□□□□ 0.11
PCAT19-202ENST00000594315 ABCA5Q8WWZ7 1642 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms