RNA–Protein interactions for RNA: ENST00000593452.1

RGPD4-AS1-203, Transcript of RGPD4 antisense RNA 1 (head to head), humanhuman

TSL 5

Gene RGPD4-AS1, Length 616 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-AS1-203ENST00000593452 NISCHQ9Y2I1 1504 aa32.68■■■□□ 2.82
RGPD4-AS1-203ENST00000593452 AEBP2Q6ZN18 517 aaPredicted RBP31.61■■■□□ 2.65
RGPD4-AS1-203ENST00000593452 CHIC1Q5VXU3 224 aa29.73■■■□□ 2.35
RGPD4-AS1-203ENST00000593452 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
RGPD4-AS1-203ENST00000593452 ABCC9O60706 1549 aa29.04■■■□□ 2.24
RGPD4-AS1-203ENST00000593452 DCAF8L2P0C7V8 631 aa27.73■■■□□ 2.03
RGPD4-AS1-203ENST00000593452 RB1CC1Q8TDY2 1594 aa27.7■■■□□ 2.03
RGPD4-AS1-203ENST00000593452 NACADO15069 1562 aa27.55■■■□□ 2
RGPD4-AS1-203ENST00000593452 MYO15BQ96JP2 1530 aa27.2■■□□□ 1.94
RGPD4-AS1-203ENST00000593452 ZCCHC6Q5VYS8 1495 aaKnown RBP27.13■■□□□ 1.93
RGPD4-AS1-203ENST00000593452 PABPN1Q86U42 306 aaKnown RBP eCLIP27.13■■□□□ 1.93
RGPD4-AS1-203ENST00000593452 SENP3Q9H4L4 574 aaPredicted RBP27.02■■□□□ 1.92
RGPD4-AS1-203ENST00000593452 UNC13AQ9UPW8 1703 aa26.96■■□□□ 1.91
RGPD4-AS1-203ENST00000593452 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.91
RGPD4-AS1-203ENST00000593452 DNAJC5BQ9UF47 199 aa26.94■■□□□ 1.9
RGPD4-AS1-203ENST00000593452 BICRAQ9NZM4 1560 aa26.8■■□□□ 1.88
RGPD4-AS1-203ENST00000593452 SCRIBQ14160 1630 aa26.7■■□□□ 1.86
RGPD4-AS1-203ENST00000593452 PHF23Q9BUL5 403 aaPredicted RBP26.62■■□□□ 1.85
RGPD4-AS1-203ENST00000593452 SHROOM4Q9ULL8 1493 aa26.49■■□□□ 1.83
RGPD4-AS1-203ENST00000593452 EIF4G1Q04637 1599 aaKnown RBP26.18■■□□□ 1.78
RGPD4-AS1-203ENST00000593452 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
RGPD4-AS1-203ENST00000593452 CECR2Q9BXF3 1484 aa26.12■■□□□ 1.77
RGPD4-AS1-203ENST00000593452 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
RGPD4-AS1-203ENST00000593452 NCAPD3P42695 1498 aa25.42■■□□□ 1.66
RGPD4-AS1-203ENST00000593452 ATAD2BQ9ULI0 1458 aa25.4■■□□□ 1.66
RGPD4-AS1-203ENST00000593452 BAZ1AQ9NRL2 1556 aaPredicted RBP25.38■■□□□ 1.65
RGPD4-AS1-203ENST00000593452 SMARCA2P51531 1590 aa25.37■■□□□ 1.65
RGPD4-AS1-203ENST00000593452 HMGXB3Q12766 1538 aa25.26■■□□□ 1.63
RGPD4-AS1-203ENST00000593452 BAZ1BQ9UIG0 1483 aaKnown RBP25.24■■□□□ 1.63
RGPD4-AS1-203ENST00000593452 FOXD1Q16676 465 aa25.21■■□□□ 1.63
RGPD4-AS1-203ENST00000593452 MROH2BQ7Z745 1585 aa25.19■■□□□ 1.62
RGPD4-AS1-203ENST00000593452 PEG3Q9GZU2 1588 aa25.13■■□□□ 1.61
RGPD4-AS1-203ENST00000593452 ERCC6Q03468 1493 aa25.12■■□□□ 1.61
RGPD4-AS1-203ENST00000593452 NESP48681 1621 aa24.98■■□□□ 1.59
RGPD4-AS1-203ENST00000593452 WIZO95785 1651 aa24.91■■□□□ 1.58
RGPD4-AS1-203ENST00000593452 CUX2O14529 1486 aa24.87■■□□□ 1.57
RGPD4-AS1-203ENST00000593452 LAMC3Q9Y6N6 1575 aa24.82■■□□□ 1.56
RGPD4-AS1-203ENST00000593452 RSF1Q96T23 1441 aaPredicted RBP24.79■■□□□ 1.56
RGPD4-AS1-203ENST00000593452 PDS5BQ9NTI5 1447 aa24.74■■□□□ 1.55
RGPD4-AS1-203ENST00000593452 CADPSQ9ULU8 1353 aa24.72■■□□□ 1.55
RGPD4-AS1-203ENST00000593452 KIF21AQ7Z4S6 1674 aa24.62■■□□□ 1.53
RGPD4-AS1-203ENST00000593452 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
RGPD4-AS1-203ENST00000593452 THOC2Q8NI27 1593 aaKnown RBP24.6■■□□□ 1.53
RGPD4-AS1-203ENST00000593452 DNAJC5Q9H3Z4 198 aa24.58■■□□□ 1.53
RGPD4-AS1-203ENST00000593452 MRC2Q9UBG0 1479 aa24.48■■□□□ 1.51
RGPD4-AS1-203ENST00000593452 CFTRP13569 1480 aa24.46■■□□□ 1.51
RGPD4-AS1-203ENST00000593452 CEP164Q9UPV0 1460 aa24.46■■□□□ 1.51
RGPD4-AS1-203ENST00000593452 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.51
RGPD4-AS1-203ENST00000593452 WDR62O43379 1518 aa24.35■■□□□ 1.49
RGPD4-AS1-203ENST00000593452 CCDC88BA6NC98 1476 aa24.35■■□□□ 1.49
RGPD4-AS1-203ENST00000593452 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
RGPD4-AS1-203ENST00000593452 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
RGPD4-AS1-203ENST00000593452 SUPT5HO00267 1087 aaKnown RBP24.08■■□□□ 1.45
RGPD4-AS1-203ENST00000593452 TOPBP1Q92547 1522 aa23.99■■□□□ 1.43
RGPD4-AS1-203ENST00000593452 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
RGPD4-AS1-203ENST00000593452 IFT140Q96RY7 1462 aa23.94■■□□□ 1.42
RGPD4-AS1-203ENST00000593452 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
RGPD4-AS1-203ENST00000593452 OSCARQ8IYS5 282 aa23.88■■□□□ 1.41
RGPD4-AS1-203ENST00000593452 ZNF608Q9ULD9 1512 aaPredicted RBP23.87■■□□□ 1.41
RGPD4-AS1-203ENST00000593452 POLA1P09884 1462 aaPredicted RBP23.76■■□□□ 1.39
RGPD4-AS1-203ENST00000593452 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
RGPD4-AS1-203ENST00000593452 MSH5O43196 834 aa23.75■■□□□ 1.39
RGPD4-AS1-203ENST00000593452 EIF4G3O43432 1585 aaKnown RBP23.73■■□□□ 1.39
RGPD4-AS1-203ENST00000593452 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.39
RGPD4-AS1-203ENST00000593452 SOGA1O94964 1423 aa23.71■■□□□ 1.39
RGPD4-AS1-203ENST00000593452 RAD54L2Q9Y4B4 1467 aa23.7■■□□□ 1.38
RGPD4-AS1-203ENST00000593452 TARBP1Q13395 1621 aaKnown RBP23.7■■□□□ 1.38
RGPD4-AS1-203ENST00000593452 POTEDQ86YR6 584 aa23.69■■□□□ 1.38
RGPD4-AS1-203ENST00000593452 FGD5Q6ZNL6 1462 aa23.67■■□□□ 1.38
RGPD4-AS1-203ENST00000593452 FBLN2P98095 1184 aa23.66■■□□□ 1.38
RGPD4-AS1-203ENST00000593452 CUX1P39880 1505 aa23.65■■□□□ 1.38
RGPD4-AS1-203ENST00000593452 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
RGPD4-AS1-203ENST00000593452 PLPPR3Q6T4P5 718 aa23.59■■□□□ 1.37
RGPD4-AS1-203ENST00000593452 SNAPC4Q5SXM2 1469 aa23.49■■□□□ 1.35
RGPD4-AS1-203ENST00000593452 CHMP7Q8WUX9 453 aaPredicted RBP23.48■■□□□ 1.35
RGPD4-AS1-203ENST00000593452 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
RGPD4-AS1-203ENST00000593452 CHD1O14646 1710 aa23.47■■□□□ 1.35
RGPD4-AS1-203ENST00000593452 GRIN2BQ13224 1484 aa23.45■■□□□ 1.34
RGPD4-AS1-203ENST00000593452 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
RGPD4-AS1-203ENST00000593452 RIMBP3CA6NJZ7 1639 aa23.43■■□□□ 1.34
RGPD4-AS1-203ENST00000593452 RIMBP3BA6NNM3 1639 aa23.43■■□□□ 1.34
RGPD4-AS1-203ENST00000593452 RIMBP3Q9UFD9 1639 aa23.43■■□□□ 1.34
RGPD4-AS1-203ENST00000593452 PIAS4Q8N2W9 510 aaPredicted RBP23.42■■□□□ 1.34
RGPD4-AS1-203ENST00000593452 ARHGEF11O15085 1522 aa23.41■■□□□ 1.34
RGPD4-AS1-203ENST00000593452 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
RGPD4-AS1-203ENST00000593452 MAGI1Q96QZ7 1491 aaPredicted RBP23.41■■□□□ 1.34
RGPD4-AS1-203ENST00000593452 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
RGPD4-AS1-203ENST00000593452 TOP2BQ02880 1626 aa23.34■■□□□ 1.33
RGPD4-AS1-203ENST00000593452 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
RGPD4-AS1-203ENST00000593452 SYNJ1O43426 1573 aa23.33■■□□□ 1.33
RGPD4-AS1-203ENST00000593452 CYB5RLQ6IPT4 315 aa23.33■■□□□ 1.33
RGPD4-AS1-203ENST00000593452 PPP6R1Q9UPN7 881 aa23.33■■□□□ 1.33
RGPD4-AS1-203ENST00000593452 PBRM1Q86U86 1689 aa23.31■■□□□ 1.32
RGPD4-AS1-203ENST00000593452 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
RGPD4-AS1-203ENST00000593452 ABCA5Q8WWZ7 1642 aa23.29■■□□□ 1.32
RGPD4-AS1-203ENST00000593452 CLASP1Q7Z460 1538 aa23.2■■□□□ 1.3
RGPD4-AS1-203ENST00000593452 ADRA2BP18089 450 aa23.19■■□□□ 1.3
RGPD4-AS1-203ENST00000593452 ARAP1Q96P48 1450 aa23.18■■□□□ 1.3
RGPD4-AS1-203ENST00000593452 GRIN2AQ12879 1464 aa23.13■■□□□ 1.29
RGPD4-AS1-203ENST00000593452 FHAD1B1AJZ9 1412 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms