RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 NISCHQ9Y2I1 1504 aa26.67■■□□□ 1.86
NPC1-214ENST00000593280 CCDC180Q9P1Z9 1646 aa23.24■■□□□ 1.31
NPC1-214ENST00000593280 ZCCHC6Q5VYS8 1495 aaKnown RBP22.46■■□□□ 1.19
NPC1-214ENST00000593280 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
NPC1-214ENST00000593280 DCAF8L2P0C7V8 631 aa21.92■■□□□ 1.1
NPC1-214ENST00000593280 SHROOM4Q9ULL8 1493 aa21.89■■□□□ 1.09
NPC1-214ENST00000593280 ABCC9O60706 1549 aa21.75■■□□□ 1.07
NPC1-214ENST00000593280 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
NPC1-214ENST00000593280 NACADO15069 1562 aa21.55■■□□□ 1.04
NPC1-214ENST00000593280 SCRIBQ14160 1630 aa21.39■■□□□ 1.02
NPC1-214ENST00000593280 RB1CC1Q8TDY2 1594 aa21.34■■□□□ 1.01
NPC1-214ENST00000593280 SUPT5HO00267 1087 aaKnown RBP21.11■□□□□ 0.97
NPC1-214ENST00000593280 UNC13AQ9UPW8 1703 aa20.97■□□□□ 0.95
NPC1-214ENST00000593280 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
NPC1-214ENST00000593280 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
NPC1-214ENST00000593280 BICRAQ9NZM4 1560 aa20.68■□□□□ 0.9
NPC1-214ENST00000593280 MROH2BQ7Z745 1585 aa20.61■□□□□ 0.89
NPC1-214ENST00000593280 BAZ1AQ9NRL2 1556 aaPredicted RBP20.6■□□□□ 0.89
NPC1-214ENST00000593280 PABPN1Q86U42 306 aaKnown RBP eCLIP20.51■□□□□ 0.87
NPC1-214ENST00000593280 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
NPC1-214ENST00000593280 WIZO95785 1651 aa20.49■□□□□ 0.87
NPC1-214ENST00000593280 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
NPC1-214ENST00000593280 TOP2AP11388 1531 aaKnown RBP20.28■□□□□ 0.84
NPC1-214ENST00000593280 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
NPC1-214ENST00000593280 DNAJC5BQ9UF47 199 aa20.14■□□□□ 0.81
NPC1-214ENST00000593280 SMARCA2P51531 1590 aa20.1■□□□□ 0.81
NPC1-214ENST00000593280 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
NPC1-214ENST00000593280 EIF4G1Q04637 1599 aaKnown RBP20.05■□□□□ 0.8
NPC1-214ENST00000593280 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
NPC1-214ENST00000593280 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
NPC1-214ENST00000593280 HMGXB3Q12766 1538 aa19.89■□□□□ 0.77
NPC1-214ENST00000593280 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
NPC1-214ENST00000593280 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
NPC1-214ENST00000593280 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
NPC1-214ENST00000593280 CC2D2AQ9P2K1 1620 aa19.71■□□□□ 0.75
NPC1-214ENST00000593280 WRNQ14191 1432 aaPredicted RBP eCLIP19.53■□□□□ 0.72
NPC1-214ENST00000593280 LOC105371045A0A1W2PR82 267 aa19.52■□□□□ 0.72
NPC1-214ENST00000593280 PRDM2Q13029 1718 aa19.51■□□□□ 0.71
NPC1-214ENST00000593280 FAM9AQ8IZU1 332 aaPredicted RBP19.49■□□□□ 0.71
NPC1-214ENST00000593280 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
NPC1-214ENST00000593280 CFTRP13569 1480 aa19.47■□□□□ 0.71
NPC1-214ENST00000593280 TOP2BQ02880 1626 aa19.39■□□□□ 0.69
NPC1-214ENST00000593280 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
NPC1-214ENST00000593280 EEA1Q15075 1411 aa19.35■□□□□ 0.69
NPC1-214ENST00000593280 CADPSQ9ULU8 1353 aa19.35■□□□□ 0.69
NPC1-214ENST00000593280 SOGA1O94964 1423 aa19.33■□□□□ 0.69
NPC1-214ENST00000593280 CUX1P39880 1505 aa19.27■□□□□ 0.68
NPC1-214ENST00000593280 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
NPC1-214ENST00000593280 EHMT2Q96KQ7 1210 aa19.22■□□□□ 0.67
NPC1-214ENST00000593280 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
NPC1-214ENST00000593280 CSRNP3Q8WYN3 585 aa19.18■□□□□ 0.66
NPC1-214ENST00000593280 FANCD2Q9BXW9 1451 aa19.17■□□□□ 0.66
NPC1-214ENST00000593280 NESP48681 1621 aa19.15■□□□□ 0.66
NPC1-214ENST00000593280 KIF21BO75037 1637 aa19.14■□□□□ 0.65
NPC1-214ENST00000593280 GOLGA3Q08378 1498 aa19.11■□□□□ 0.65
NPC1-214ENST00000593280 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
NPC1-214ENST00000593280 DNMBPQ6XZF7 1577 aa19.07■□□□□ 0.64
NPC1-214ENST00000593280 TNIKQ9UKE5 1360 aa19.05■□□□□ 0.64
NPC1-214ENST00000593280 FGD5Q6ZNL6 1462 aa19.04■□□□□ 0.64
NPC1-214ENST00000593280 KIF27Q86VH2 1401 aa19.02■□□□□ 0.64
NPC1-214ENST00000593280 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
NPC1-214ENST00000593280 KIF21AQ7Z4S6 1674 aa18.99■□□□□ 0.63
NPC1-214ENST00000593280 TOPBP1Q92547 1522 aa18.99■□□□□ 0.63
NPC1-214ENST00000593280 CEP162Q5TB80 1403 aa18.99■□□□□ 0.63
NPC1-214ENST00000593280 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
NPC1-214ENST00000593280 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
NPC1-214ENST00000593280 RAPGEF2Q9Y4G8 1499 aa18.95■□□□□ 0.62
NPC1-214ENST00000593280 CUX2O14529 1486 aa18.94■□□□□ 0.62
NPC1-214ENST00000593280 PRXQ9BXM0 1461 aa18.93■□□□□ 0.62
NPC1-214ENST00000593280 URB2Q14146 1524 aaKnown RBP18.93■□□□□ 0.62
NPC1-214ENST00000593280 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
NPC1-214ENST00000593280 ABCA10Q8WWZ4 1543 aa18.86■□□□□ 0.61
NPC1-214ENST00000593280 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
NPC1-214ENST00000593280 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
NPC1-214ENST00000593280 PCGF6Q9BYE7 350 aa18.84■□□□□ 0.61
NPC1-214ENST00000593280 CLIP1P30622 1438 aa18.8■□□□□ 0.6
NPC1-214ENST00000593280 TRIM26Q12899 539 aaPredicted RBP18.8■□□□□ 0.6
NPC1-214ENST00000593280 IGF1RP08069 1367 aa18.79■□□□□ 0.6
NPC1-214ENST00000593280 MRC2Q9UBG0 1479 aa18.78■□□□□ 0.6
NPC1-214ENST00000593280 CUL7Q14999 1698 aa18.74■□□□□ 0.59
NPC1-214ENST00000593280 ABCA5Q8WWZ7 1642 aa18.73■□□□□ 0.59
NPC1-214ENST00000593280 CARMIL1Q5VZK9 1371 aa18.72■□□□□ 0.59
NPC1-214ENST00000593280 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
NPC1-214ENST00000593280 WDR62O43379 1518 aa18.68■□□□□ 0.58
NPC1-214ENST00000593280 VPS8Q8N3P4 1428 aa18.66■□□□□ 0.58
NPC1-214ENST00000593280 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
NPC1-214ENST00000593280 DNAJC5Q9H3Z4 198 aa18.65■□□□□ 0.58
NPC1-214ENST00000593280 GAPVD1Q14C86 1478 aa18.64■□□□□ 0.58
NPC1-214ENST00000593280 RANGAP1P46060 587 aaPredicted RBP18.63■□□□□ 0.57
NPC1-214ENST00000593280 PPARGC1BQ86YN6 1023 aaKnown RBP18.62■□□□□ 0.57
NPC1-214ENST00000593280 TDRD9Q8NDG6 1382 aaKnown RBP18.62■□□□□ 0.57
NPC1-214ENST00000593280 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
NPC1-214ENST00000593280 PBRM1Q86U86 1689 aa18.61■□□□□ 0.57
NPC1-214ENST00000593280 ARAP1Q96P48 1450 aa18.6■□□□□ 0.57
NPC1-214ENST00000593280 CTTNBP2Q8WZ74 1663 aa18.59■□□□□ 0.57
NPC1-214ENST00000593280 IFT140Q96RY7 1462 aa18.57■□□□□ 0.56
NPC1-214ENST00000593280 ARHGAP35Q9NRY4 1499 aa18.55■□□□□ 0.56
NPC1-214ENST00000593280 ADAMTS12P58397 1594 aa18.48■□□□□ 0.55
NPC1-214ENST00000593280 AQRO60306 1485 aaKnown RBP eCLIP18.48■□□□□ 0.55
NPC1-214ENST00000593280 APLP2Q06481 763 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms