RNA–Protein interactions for RNA: ENST00000593111.1

PSME3-216, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-216ENST00000593111 NISCHQ9Y2I1 1504 aa43.86■■■■■ 4.61
PSME3-216ENST00000593111 ABCC9O60706 1549 aa39.7■■■■□ 3.95
PSME3-216ENST00000593111 CCDC180Q9P1Z9 1646 aa39.37■■■■□ 3.89
PSME3-216ENST00000593111 RB1CC1Q8TDY2 1594 aa37.64■■■■□ 3.62
PSME3-216ENST00000593111 DNAJC5BQ9UF47 199 aa37.46■■■■□ 3.59
PSME3-216ENST00000593111 DCAF8L2P0C7V8 631 aa37.36■■■■□ 3.57
PSME3-216ENST00000593111 NACADO15069 1562 aa37.32■■■■□ 3.56
PSME3-216ENST00000593111 PABPN1Q86U42 306 aaKnown RBP eCLIP37.01■■■■□ 3.52
PSME3-216ENST00000593111 UNC13AQ9UPW8 1703 aa36.73■■■■□ 3.47
PSME3-216ENST00000593111 MYO15BQ96JP2 1530 aa36.69■■■■□ 3.46
PSME3-216ENST00000593111 BICRAQ9NZM4 1560 aa36.52■■■■□ 3.44
PSME3-216ENST00000593111 ZCCHC6Q5VYS8 1495 aaKnown RBP36.26■■■■□ 3.4
PSME3-216ENST00000593111 DCAF1Q9Y4B6 1507 aa36.16■■■■□ 3.38
PSME3-216ENST00000593111 SCRIBQ14160 1630 aa35.95■■■■□ 3.35
PSME3-216ENST00000593111 SHROOM4Q9ULL8 1493 aa35.95■■■■□ 3.35
PSME3-216ENST00000593111 CC2D2AQ9P2K1 1620 aa35.79■■■■□ 3.32
PSME3-216ENST00000593111 CECR2Q9BXF3 1484 aa35.76■■■■□ 3.32
PSME3-216ENST00000593111 EIF4G1Q04637 1599 aaKnown RBP35.66■■■■□ 3.3
PSME3-216ENST00000593111 DNAJC5Q9H3Z4 198 aa34.54■■■■□ 3.12
PSME3-216ENST00000593111 NCAPD3P42695 1498 aa34.47■■■■□ 3.11
PSME3-216ENST00000593111 ATAD2BQ9ULI0 1458 aa34.35■■■■□ 3.09
PSME3-216ENST00000593111 ERCC6Q03468 1493 aa34.31■■■■□ 3.08
PSME3-216ENST00000593111 SMARCA4P51532 1647 aa34.23■■■■□ 3.07
PSME3-216ENST00000593111 SMARCA2P51531 1590 aa34.23■■■■□ 3.07
PSME3-216ENST00000593111 CUX2O14529 1486 aa34.22■■■■□ 3.07
PSME3-216ENST00000593111 HMGXB3Q12766 1538 aa34.14■■■■□ 3.06
PSME3-216ENST00000593111 BAZ1AQ9NRL2 1556 aaPredicted RBP34.06■■■■□ 3.04
PSME3-216ENST00000593111 BAZ1BQ9UIG0 1483 aaKnown RBP34.03■■■■□ 3.04
PSME3-216ENST00000593111 NESP48681 1621 aa34.03■■■■□ 3.04
PSME3-216ENST00000593111 PEG3Q9GZU2 1588 aa33.86■■■■□ 3.01
PSME3-216ENST00000593111 MROH2BQ7Z745 1585 aa33.81■■■■□ 3
PSME3-216ENST00000593111 LAMC3Q9Y6N6 1575 aa33.71■■■□□ 2.99
PSME3-216ENST00000593111 THOC2Q8NI27 1593 aaKnown RBP33.63■■■□□ 2.97
PSME3-216ENST00000593111 PDS5BQ9NTI5 1447 aa33.59■■■□□ 2.97
PSME3-216ENST00000593111 KIF21AQ7Z4S6 1674 aa33.54■■■□□ 2.96
PSME3-216ENST00000593111 CADPSQ9ULU8 1353 aa33.46■■■□□ 2.95
PSME3-216ENST00000593111 WIZO95785 1651 aa33.4■■■□□ 2.94
PSME3-216ENST00000593111 MRC2Q9UBG0 1479 aa33.27■■■□□ 2.92
PSME3-216ENST00000593111 WDR62O43379 1518 aa33.15■■■□□ 2.9
PSME3-216ENST00000593111 CEP164Q9UPV0 1460 aa33.12■■■□□ 2.89
PSME3-216ENST00000593111 FANCD2Q9BXW9 1451 aa33.06■■■□□ 2.88
PSME3-216ENST00000593111 RSF1Q96T23 1441 aaPredicted RBP33.05■■■□□ 2.88
PSME3-216ENST00000593111 TRIM41Q8WV44 630 aa33.03■■■□□ 2.88
PSME3-216ENST00000593111 CFTRP13569 1480 aa32.99■■■□□ 2.87
PSME3-216ENST00000593111 TOP2AP11388 1531 aaKnown RBP32.93■■■□□ 2.86
PSME3-216ENST00000593111 URB2Q14146 1524 aaKnown RBP32.78■■■□□ 2.84
PSME3-216ENST00000593111 OSCARQ8IYS5 282 aa32.77■■■□□ 2.84
PSME3-216ENST00000593111 CCDC88BA6NC98 1476 aa32.62■■■□□ 2.81
PSME3-216ENST00000593111 PRDM2Q13029 1718 aa32.57■■■□□ 2.81
PSME3-216ENST00000593111 IFT140Q96RY7 1462 aa32.45■■■□□ 2.79
PSME3-216ENST00000593111 ZNF608Q9ULD9 1512 aaPredicted RBP32.43■■■□□ 2.78
PSME3-216ENST00000593111 TOPBP1Q92547 1522 aa32.41■■■□□ 2.78
PSME3-216ENST00000593111 ABCC8Q09428 1581 aa32.33■■■□□ 2.77
PSME3-216ENST00000593111 RIMBP3CA6NJZ7 1639 aa32.25■■■□□ 2.75
PSME3-216ENST00000593111 RIMBP3BA6NNM3 1639 aa32.25■■■□□ 2.75
PSME3-216ENST00000593111 RIMBP3Q9UFD9 1639 aa32.25■■■□□ 2.75
PSME3-216ENST00000593111 DNMBPQ6XZF7 1577 aa32.24■■■□□ 2.75
PSME3-216ENST00000593111 EIF4G3O43432 1585 aaKnown RBP32.19■■■□□ 2.74
PSME3-216ENST00000593111 AQRO60306 1485 aaKnown RBP eCLIP32.16■■■□□ 2.748e-9■■■□□ 17.1
PSME3-216ENST00000593111 ARHGEF11O15085 1522 aa32.13■■■□□ 2.73
PSME3-216ENST00000593111 FBLN2P98095 1184 aa32.1■■■□□ 2.73
PSME3-216ENST00000593111 TARBP1Q13395 1621 aaKnown RBP32.1■■■□□ 2.73
PSME3-216ENST00000593111 POLA1P09884 1462 aaPredicted RBP32.05■■■□□ 2.72
PSME3-216ENST00000593111 CYB5RLQ6IPT4 315 aa32.05■■■□□ 2.72
PSME3-216ENST00000593111 CHD1O14646 1710 aa32■■■□□ 2.71
PSME3-216ENST00000593111 RAD54L2Q9Y4B4 1467 aa31.99■■■□□ 2.71
PSME3-216ENST00000593111 SOGA1O94964 1423 aa31.99■■■□□ 2.71
PSME3-216ENST00000593111 TDRD9Q8NDG6 1382 aaKnown RBP31.95■■■□□ 2.71
PSME3-216ENST00000593111 FGD5Q6ZNL6 1462 aa31.84■■■□□ 2.69
PSME3-216ENST00000593111 TRHP20396 242 aaPredicted RBP31.8■■■□□ 2.68
PSME3-216ENST00000593111 CHMP7Q8WUX9 453 aaPredicted RBP31.8■■■□□ 2.68
PSME3-216ENST00000593111 ARAP1Q96P48 1450 aa31.79■■■□□ 2.68
PSME3-216ENST00000593111 SNAPC4Q5SXM2 1469 aa31.78■■■□□ 2.68
PSME3-216ENST00000593111 CUX1P39880 1505 aa31.76■■■□□ 2.68
PSME3-216ENST00000593111 WDR97A6NE52 1622 aa31.71■■■□□ 2.67
PSME3-216ENST00000593111 GRIN2BQ13224 1484 aa31.67■■■□□ 2.66
PSME3-216ENST00000593111 MAGI1Q96QZ7 1491 aaPredicted RBP31.66■■■□□ 2.66
PSME3-216ENST00000593111 SUPT5HO00267 1087 aaKnown RBP31.62■■■□□ 2.65
PSME3-216ENST00000593111 SYNJ1O43426 1573 aa31.62■■■□□ 2.65
PSME3-216ENST00000593111 CLASP1Q7Z460 1538 aa31.61■■■□□ 2.65
PSME3-216ENST00000593111 SYNJ2O15056 1496 aa31.59■■■□□ 2.65
PSME3-216ENST00000593111 GAPVD1Q14C86 1478 aa31.55■■■□□ 2.64
PSME3-216ENST00000593111 PBRM1Q86U86 1689 aa31.48■■■□□ 2.63
PSME3-216ENST00000593111 ABCA10Q8WWZ4 1543 aa31.44■■■□□ 2.62
PSME3-216ENST00000593111 ABCA5Q8WWZ7 1642 aa31.38■■■□□ 2.61
PSME3-216ENST00000593111 WRNQ14191 1432 aaPredicted RBP eCLIP31.34■■■□□ 2.61
PSME3-216ENST00000593111 GRIN2AQ12879 1464 aa31.25■■■□□ 2.59
PSME3-216ENST00000593111 TOP2BQ02880 1626 aa31.19■■■□□ 2.58
PSME3-216ENST00000593111 ADAMTS12P58397 1594 aa31.17■■■□□ 2.58
PSME3-216ENST00000593111 BIVM-ERCC5R4GMW8 1640 aa31.16■■■□□ 2.58
PSME3-216ENST00000593111 ERCC6L2Q5T890 1561 aa31.16■■■□□ 2.58
PSME3-216ENST00000593111 CEP170Q5SW79 1584 aa31.13■■■□□ 2.57
PSME3-216ENST00000593111 FHAD1B1AJZ9 1412 aa31.13■■■□□ 2.57
PSME3-216ENST00000593111 NUP160Q12769 1436 aa31.13■■■□□ 2.57
PSME3-216ENST00000593111 ERICH3Q5RHP9 1530 aa31.04■■■□□ 2.56
PSME3-216ENST00000593111 AEBP2Q6ZN18 517 aaPredicted RBP31.02■■■□□ 2.56
PSME3-216ENST00000593111 SHROOM2Q13796 1616 aa30.98■■■□□ 2.55
PSME3-216ENST00000593111 JPH4Q96JJ6 628 aa30.94■■■□□ 2.54
PSME3-216ENST00000593111 PRG4Q92954 1404 aaPredicted RBP30.93■■■□□ 2.54
PSME3-216ENST00000593111 NPM1P06748 294 aaKnown RBP eCLIP30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms