RNA–Protein interactions for RNA: ENST00000592768.5

HKR1-227, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 3

Gene HKR1, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-227ENST00000592768 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
HKR1-227ENST00000592768 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
HKR1-227ENST00000592768 ABCC9O60706 1549 aa25.9■■□□□ 1.74
HKR1-227ENST00000592768 RB1CC1Q8TDY2 1594 aa24.96■■□□□ 1.59
HKR1-227ENST00000592768 NACADO15069 1562 aa24.92■■□□□ 1.58
HKR1-227ENST00000592768 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
HKR1-227ENST00000592768 DCAF8L2P0C7V8 631 aa24.75■■□□□ 1.55
HKR1-227ENST00000592768 ZCCHC6Q5VYS8 1495 aaKnown RBP24.72■■□□□ 1.55
HKR1-227ENST00000592768 DCAF1Q9Y4B6 1507 aa24.63■■□□□ 1.53
HKR1-227ENST00000592768 UNC13AQ9UPW8 1703 aa24.41■■□□□ 1.5
HKR1-227ENST00000592768 BICRAQ9NZM4 1560 aa24.19■■□□□ 1.46
HKR1-227ENST00000592768 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
HKR1-227ENST00000592768 SCRIBQ14160 1630 aa24.08■■□□□ 1.45
HKR1-227ENST00000592768 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
HKR1-227ENST00000592768 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
HKR1-227ENST00000592768 DNAJC5BQ9UF47 199 aa23.84■■□□□ 1.41
HKR1-227ENST00000592768 EIF4G1Q04637 1599 aaKnown RBP23.55■■□□□ 1.36
HKR1-227ENST00000592768 CC2D2AQ9P2K1 1620 aa23.48■■□□□ 1.35
HKR1-227ENST00000592768 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
HKR1-227ENST00000592768 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
HKR1-227ENST00000592768 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
HKR1-227ENST00000592768 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
HKR1-227ENST00000592768 NCAPD3P42695 1498 aa22.98■■□□□ 1.27
HKR1-227ENST00000592768 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
HKR1-227ENST00000592768 SMARCA2P51531 1590 aa22.95■■□□□ 1.26
HKR1-227ENST00000592768 PEG3Q9GZU2 1588 aa22.89■■□□□ 1.25
HKR1-227ENST00000592768 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
HKR1-227ENST00000592768 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
HKR1-227ENST00000592768 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
HKR1-227ENST00000592768 WIZO95785 1651 aa22.62■■□□□ 1.21
HKR1-227ENST00000592768 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
HKR1-227ENST00000592768 LAMC3Q9Y6N6 1575 aa22.4■■□□□ 1.18
HKR1-227ENST00000592768 NESP48681 1621 aa22.39■■□□□ 1.18
HKR1-227ENST00000592768 TOP2AP11388 1531 aaKnown RBP22.39■■□□□ 1.17
HKR1-227ENST00000592768 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
HKR1-227ENST00000592768 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
HKR1-227ENST00000592768 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
HKR1-227ENST00000592768 CUX2O14529 1486 aa22.2■■□□□ 1.14
HKR1-227ENST00000592768 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
HKR1-227ENST00000592768 CFTRP13569 1480 aa22.15■■□□□ 1.14
HKR1-227ENST00000592768 THOC2Q8NI27 1593 aaKnown RBP22.12■■□□□ 1.13
HKR1-227ENST00000592768 CCDC88BA6NC98 1476 aa22.11■■□□□ 1.13
HKR1-227ENST00000592768 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
HKR1-227ENST00000592768 FANCD2Q9BXW9 1451 aa22.02■■□□□ 1.12
HKR1-227ENST00000592768 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
HKR1-227ENST00000592768 MRC2Q9UBG0 1479 aa21.99■■□□□ 1.11
HKR1-227ENST00000592768 WDR62O43379 1518 aa21.94■■□□□ 1.1
HKR1-227ENST00000592768 SUPT5HO00267 1087 aaKnown RBP21.86■■□□□ 1.09
HKR1-227ENST00000592768 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
HKR1-227ENST00000592768 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
HKR1-227ENST00000592768 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
HKR1-227ENST00000592768 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
HKR1-227ENST00000592768 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
HKR1-227ENST00000592768 IFT140Q96RY7 1462 aa21.56■■□□□ 1.04
HKR1-227ENST00000592768 POLA1P09884 1462 aaPredicted RBP21.46■■□□□ 1.03
HKR1-227ENST00000592768 CUX1P39880 1505 aa21.45■■□□□ 1.02
HKR1-227ENST00000592768 TARBP1Q13395 1621 aaKnown RBP21.45■■□□□ 1.02
HKR1-227ENST00000592768 ZNF608Q9ULD9 1512 aaPredicted RBP21.43■■□□□ 1.02
HKR1-227ENST00000592768 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.02
HKR1-227ENST00000592768 SOGA1O94964 1423 aa21.38■■□□□ 1.01
HKR1-227ENST00000592768 EIF4G3O43432 1585 aaKnown RBP21.37■■□□□ 1.01
HKR1-227ENST00000592768 RAD54L2Q9Y4B4 1467 aa21.34■■□□□ 1.01
HKR1-227ENST00000592768 WDR97A6NE52 1622 aa21.33■■□□□ 1.01
HKR1-227ENST00000592768 AQRO60306 1485 aaKnown RBP eCLIP21.3■■□□□ 1
HKR1-227ENST00000592768 BIVM-ERCC5R4GMW8 1640 aa21.29■■□□□ 1
HKR1-227ENST00000592768 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
HKR1-227ENST00000592768 TOP2BQ02880 1626 aa21.28■■□□□ 1
HKR1-227ENST00000592768 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
HKR1-227ENST00000592768 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
HKR1-227ENST00000592768 OSCARQ8IYS5 282 aa21.23■□□□□ 0.99
HKR1-227ENST00000592768 ABCA10Q8WWZ4 1543 aa21.22■□□□□ 0.99
HKR1-227ENST00000592768 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
HKR1-227ENST00000592768 CHD1O14646 1710 aa21.14■□□□□ 0.97
HKR1-227ENST00000592768 ABCA5Q8WWZ7 1642 aa21.14■□□□□ 0.97
HKR1-227ENST00000592768 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
HKR1-227ENST00000592768 PBRM1Q86U86 1689 aa21.12■□□□□ 0.97
HKR1-227ENST00000592768 MAGI1Q96QZ7 1491 aaPredicted RBP21.12■□□□□ 0.97
HKR1-227ENST00000592768 SNAPC4Q5SXM2 1469 aa21.11■□□□□ 0.97
HKR1-227ENST00000592768 SYNJ2O15056 1496 aa21.02■□□□□ 0.96
HKR1-227ENST00000592768 FBLN2P98095 1184 aa21.02■□□□□ 0.96
HKR1-227ENST00000592768 CHMP7Q8WUX9 453 aaPredicted RBP20.99■□□□□ 0.95
HKR1-227ENST00000592768 ERICH3Q5RHP9 1530 aa20.98■□□□□ 0.95
HKR1-227ENST00000592768 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
HKR1-227ENST00000592768 RIMBP3CA6NJZ7 1639 aa20.91■□□□□ 0.94
HKR1-227ENST00000592768 RIMBP3BA6NNM3 1639 aa20.91■□□□□ 0.94
HKR1-227ENST00000592768 RIMBP3Q9UFD9 1639 aa20.91■□□□□ 0.94
HKR1-227ENST00000592768 CLASP1Q7Z460 1538 aa20.9■□□□□ 0.94
HKR1-227ENST00000592768 FHAD1B1AJZ9 1412 aa20.89■□□□□ 0.94
HKR1-227ENST00000592768 ARHGEF11O15085 1522 aa20.88■□□□□ 0.93
HKR1-227ENST00000592768 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
HKR1-227ENST00000592768 KIF27Q86VH2 1401 aa20.86■□□□□ 0.93
HKR1-227ENST00000592768 NUP160Q12769 1436 aa20.79■□□□□ 0.92
HKR1-227ENST00000592768 IGF1RP08069 1367 aa20.78■□□□□ 0.92
HKR1-227ENST00000592768 CUL7Q14999 1698 aa20.77■□□□□ 0.92
HKR1-227ENST00000592768 CEP170Q5SW79 1584 aa20.76■□□□□ 0.91
HKR1-227ENST00000592768 TRIM41Q8WV44 630 aa20.76■□□□□ 0.91
HKR1-227ENST00000592768 ARAP1Q96P48 1450 aa20.7■□□□□ 0.9
HKR1-227ENST00000592768 SHROOM2Q13796 1616 aa20.67■□□□□ 0.9
HKR1-227ENST00000592768 CYB5RLQ6IPT4 315 aa20.66■□□□□ 0.9
HKR1-227ENST00000592768 CARMIL1Q5VZK9 1371 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms