RNA–Protein interactions for RNA: ENST00000592754.5

PPP1R12C-208, Transcript of protein phosphatase 1 regulatory subunit 12C, human

TSL 2

Gene PPP1R12C, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R12C-208	ENST00000592754	NISCH	Q9Y2I1	1504 aa		39.23	■■■■□ 3.87
PPP1R12C-208	ENST00000592754	CCDC180	Q9P1Z9	1646 aa		35.03	■■■■□ 3.2
PPP1R12C-208	ENST00000592754	ABCC9	O60706	1549 aa		34.37	■■■■□ 3.09
PPP1R12C-208	ENST00000592754	RB1CC1	Q8TDY2	1594 aa		33	■■■□□ 2.87
PPP1R12C-208	ENST00000592754	NACAD	O15069	1562 aa		32.92	■■■□□ 2.86
PPP1R12C-208	ENST00000592754	MYO15B	Q96JP2	1530 aa		32.68	■■■□□ 2.82
PPP1R12C-208	ENST00000592754	ZCCHC6	Q5VYS8	1495 aa	Known RBP	32.67	■■■□□ 2.82
PPP1R12C-208	ENST00000592754	DCAF8L2	P0C7V8	631 aa		32.65	■■■□□ 2.82
PPP1R12C-208	ENST00000592754	DCAF1	Q9Y4B6	1507 aa		32.47	■■■□□ 2.79
PPP1R12C-208	ENST00000592754	UNC13A	Q9UPW8	1703 aa		32.36	■■■□□ 2.77
PPP1R12C-208	ENST00000592754	BICRA	Q9NZM4	1560 aa		32.07	■■■□□ 2.72
PPP1R12C-208	ENST00000592754	PABPN1	Q86U42	306 aa	Known RBP eCLIP	32.01	■■■□□ 2.71	1e-6	■■■□□ 18.7
PPP1R12C-208	ENST00000592754	SCRIB	Q14160	1630 aa		31.91	■■■□□ 2.7
PPP1R12C-208	ENST00000592754	SHROOM4	Q9ULL8	1493 aa		31.69	■■■□□ 2.66
PPP1R12C-208	ENST00000592754	DNAJC5B	Q9UF47	199 aa		31.68	■■■□□ 2.66
PPP1R12C-208	ENST00000592754	EIF4G1	Q04637	1599 aa	Known RBP	31.21	■■■□□ 2.59
PPP1R12C-208	ENST00000592754	CC2D2A	Q9P2K1	1620 aa		31.13	■■■□□ 2.57
PPP1R12C-208	ENST00000592754	CECR2	Q9BXF3	1484 aa		30.89	■■■□□ 2.54
PPP1R12C-208	ENST00000592754	SMARCA4	P51532	1647 aa		30.51	■■■□□ 2.48
PPP1R12C-208	ENST00000592754	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.42	■■■□□ 2.46
PPP1R12C-208	ENST00000592754	ATAD2B	Q9ULI0	1458 aa		30.36	■■■□□ 2.45
PPP1R12C-208	ENST00000592754	NCAPD3	P42695	1498 aa		30.35	■■■□□ 2.45
PPP1R12C-208	ENST00000592754	SMARCA2	P51531	1590 aa		30.31	■■■□□ 2.44
PPP1R12C-208	ENST00000592754	HMGXB3	Q12766	1538 aa		30.24	■■■□□ 2.43
PPP1R12C-208	ENST00000592754	MROH2B	Q7Z745	1585 aa		30.24	■■■□□ 2.43
PPP1R12C-208	ENST00000592754	PEG3	Q9GZU2	1588 aa		30.24	■■■□□ 2.43
PPP1R12C-208	ENST00000592754	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.08	■■■□□ 2.41
PPP1R12C-208	ENST00000592754	WIZ	O95785	1651 aa		29.92	■■■□□ 2.38
PPP1R12C-208	ENST00000592754	RSF1	Q96T23	1441 aa	Predicted RBP	29.84	■■■□□ 2.37
PPP1R12C-208	ENST00000592754	NES	P48681	1621 aa		29.71	■■■□□ 2.35
PPP1R12C-208	ENST00000592754	LAMC3	Q9Y6N6	1575 aa		29.62	■■■□□ 2.33
PPP1R12C-208	ENST00000592754	ERCC6	Q03468	1493 aa		29.61	■■■□□ 2.33
PPP1R12C-208	ENST00000592754	TOP2A	P11388	1531 aa	Known RBP	29.59	■■■□□ 2.33
PPP1R12C-208	ENST00000592754	CADPS	Q9ULU8	1353 aa		29.43	■■■□□ 2.3
PPP1R12C-208	ENST00000592754	CUX2	O14529	1486 aa		29.42	■■■□□ 2.3
PPP1R12C-208	ENST00000592754	KIF21A	Q7Z4S6	1674 aa		29.41	■■■□□ 2.3
PPP1R12C-208	ENST00000592754	SUPT5H	O00267	1087 aa	Known RBP	29.39	■■■□□ 2.3
PPP1R12C-208	ENST00000592754	THOC2	Q8NI27	1593 aa	Known RBP	29.38	■■■□□ 2.29
PPP1R12C-208	ENST00000592754	PDS5B	Q9NTI5	1447 aa		29.35	■■■□□ 2.29
PPP1R12C-208	ENST00000592754	CFTR	P13569	1480 aa		29.25	■■■□□ 2.27
PPP1R12C-208	ENST00000592754	CCDC88B	A6NC98	1476 aa		29.19	■■■□□ 2.26
PPP1R12C-208	ENST00000592754	PRDM2	Q13029	1718 aa		29.13	■■■□□ 2.25
PPP1R12C-208	ENST00000592754	FANCD2	Q9BXW9	1451 aa		29.12	■■■□□ 2.25
PPP1R12C-208	ENST00000592754	MRC2	Q9UBG0	1479 aa		29.12	■■■□□ 2.25
PPP1R12C-208	ENST00000592754	CEP164	Q9UPV0	1460 aa		29.11	■■■□□ 2.25
PPP1R12C-208	ENST00000592754	WDR62	O43379	1518 aa		29.07	■■■□□ 2.24
PPP1R12C-208	ENST00000592754	URB2	Q14146	1524 aa	Known RBP	28.88	■■■□□ 2.21
PPP1R12C-208	ENST00000592754	TOPBP1	Q92547	1522 aa		28.66	■■■□□ 2.18
PPP1R12C-208	ENST00000592754	DNAJC5	Q9H3Z4	198 aa		28.65	■■■□□ 2.18
PPP1R12C-208	ENST00000592754	DNMBP	Q6XZF7	1577 aa		28.62	■■■□□ 2.17
PPP1R12C-208	ENST00000592754	ABCC8	Q09428	1581 aa		28.59	■■■□□ 2.17
PPP1R12C-208	ENST00000592754	IFT140	Q96RY7	1462 aa		28.5	■■■□□ 2.15
PPP1R12C-208	ENST00000592754	ZNF608	Q9ULD9	1512 aa	Predicted RBP	28.42	■■■□□ 2.14
PPP1R12C-208	ENST00000592754	POLA1	P09884	1462 aa	Predicted RBP	28.4	■■■□□ 2.14
PPP1R12C-208	ENST00000592754	TARBP1	Q13395	1621 aa	Known RBP	28.4	■■■□□ 2.14
PPP1R12C-208	ENST00000592754	CUX1	P39880	1505 aa		28.39	■■■□□ 2.14
PPP1R12C-208	ENST00000592754	EIF4G3	O43432	1585 aa	Known RBP	28.34	■■■□□ 2.13
PPP1R12C-208	ENST00000592754	FGD5	Q6ZNL6	1462 aa		28.3	■■■□□ 2.12
PPP1R12C-208	ENST00000592754	RAD54L2	Q9Y4B4	1467 aa		28.26	■■■□□ 2.11
PPP1R12C-208	ENST00000592754	SOGA1	O94964	1423 aa		28.21	■■■□□ 2.11
PPP1R12C-208	ENST00000592754	AQR	O60306	1485 aa	Known RBP eCLIP	28.18	■■■□□ 2.1	3e-10	■□□□□ 10.8
PPP1R12C-208	ENST00000592754	WDR97	A6NE52	1622 aa		28.18	■■■□□ 2.1
PPP1R12C-208	ENST00000592754	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.17	■■■□□ 2.1
PPP1R12C-208	ENST00000592754	BIVM-ERCC5	R4GMW8	1640 aa		28.13	■■■□□ 2.09
PPP1R12C-208	ENST00000592754	SYNJ1	O43426	1573 aa		28.1	■■■□□ 2.09
PPP1R12C-208	ENST00000592754	TOP2B	Q02880	1626 aa		28.1	■■■□□ 2.09
PPP1R12C-208	ENST00000592754	TDRD9	Q8NDG6	1382 aa	Known RBP	28.08	■■■□□ 2.09
PPP1R12C-208	ENST00000592754	OSCAR	Q8IYS5	282 aa		28.04	■■■□□ 2.08
PPP1R12C-208	ENST00000592754	CHD1	O14646	1710 aa		28.04	■■■□□ 2.08
PPP1R12C-208	ENST00000592754	ABCA10	Q8WWZ4	1543 aa		28.02	■■■□□ 2.08
PPP1R12C-208	ENST00000592754	ABCA5	Q8WWZ7	1642 aa		27.99	■■■□□ 2.07
PPP1R12C-208	ENST00000592754	PBRM1	Q86U86	1689 aa		27.97	■■■□□ 2.07
PPP1R12C-208	ENST00000592754	SNAPC4	Q5SXM2	1469 aa		27.96	■■■□□ 2.07
PPP1R12C-208	ENST00000592754	GRIN2B	Q13224	1484 aa		27.95	■■■□□ 2.06
PPP1R12C-208	ENST00000592754	GAPVD1	Q14C86	1478 aa		27.92	■■■□□ 2.06
PPP1R12C-208	ENST00000592754	MAGI1	Q96QZ7	1491 aa	Predicted RBP	27.91	■■■□□ 2.06
PPP1R12C-208	ENST00000592754	SYNJ2	O15056	1496 aa		27.8	■■■□□ 2.04
PPP1R12C-208	ENST00000592754	FBLN2	P98095	1184 aa		27.78	■■■□□ 2.04
PPP1R12C-208	ENST00000592754	RIMBP3C	A6NJZ7	1639 aa		27.77	■■■□□ 2.04
PPP1R12C-208	ENST00000592754	RIMBP3B	A6NNM3	1639 aa		27.77	■■■□□ 2.04
PPP1R12C-208	ENST00000592754	RIMBP3	Q9UFD9	1639 aa		27.77	■■■□□ 2.04
PPP1R12C-208	ENST00000592754	TRIM41	Q8WV44	630 aa		27.75	■■■□□ 2.03
PPP1R12C-208	ENST00000592754	ADAMTS12	P58397	1594 aa		27.73	■■■□□ 2.03
PPP1R12C-208	ENST00000592754	ARHGEF11	O15085	1522 aa		27.72	■■■□□ 2.03
PPP1R12C-208	ENST00000592754	CLASP1	Q7Z460	1538 aa		27.72	■■■□□ 2.03
PPP1R12C-208	ENST00000592754	CHMP7	Q8WUX9	453 aa	Predicted RBP	27.69	■■■□□ 2.02
PPP1R12C-208	ENST00000592754	ERICH3	Q5RHP9	1530 aa		27.68	■■■□□ 2.02
PPP1R12C-208	ENST00000592754	CHIC1	Q5VXU3	224 aa		27.62	■■■□□ 2.01
PPP1R12C-208	ENST00000592754	GRIN2A	Q12879	1464 aa		27.61	■■■□□ 2.01
PPP1R12C-208	ENST00000592754	FHAD1	B1AJZ9	1412 aa		27.58	■■■□□ 2.01
PPP1R12C-208	ENST00000592754	KIF27	Q86VH2	1401 aa		27.55	■■■□□ 2
PPP1R12C-208	ENST00000592754	CEP170	Q5SW79	1584 aa		27.52	■■■□□ 2
PPP1R12C-208	ENST00000592754	NUP160	Q12769	1436 aa		27.51	■■□□□ 1.99
PPP1R12C-208	ENST00000592754	ARAP1	Q96P48	1450 aa		27.5	■■□□□ 1.99
PPP1R12C-208	ENST00000592754	CUL7	Q14999	1698 aa		27.43	■■□□□ 1.98
PPP1R12C-208	ENST00000592754	IGF1R	P08069	1367 aa		27.39	■■□□□ 1.98
PPP1R12C-208	ENST00000592754	RUSC2	Q8N2Y8	1516 aa		27.37	■■□□□ 1.97
PPP1R12C-208	ENST00000592754	SHROOM2	Q13796	1616 aa		27.37	■■□□□ 1.97
PPP1R12C-208	ENST00000592754	CYB5RL	Q6IPT4	315 aa		27.34	■■□□□ 1.97
PPP1R12C-208	ENST00000592754	ERCC6L2	Q5T890	1561 aa		27.31	■■□□□ 1.96

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms