RNA–Protein interactions for RNA: ENST00000592320.6

GFAP-222, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-222ENST00000592320 NISCHQ9Y2I1 1504 aa28.38■■■□□ 2.13
GFAP-222ENST00000592320 ABCC9O60706 1549 aa25.78■■□□□ 1.72
GFAP-222ENST00000592320 CCDC180Q9P1Z9 1646 aa25.23■■□□□ 1.63
GFAP-222ENST00000592320 DNAJC5BQ9UF47 199 aa24.62■■□□□ 1.53
GFAP-222ENST00000592320 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
GFAP-222ENST00000592320 NACADO15069 1562 aa23.99■■□□□ 1.43
GFAP-222ENST00000592320 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
GFAP-222ENST00000592320 DCAF8L2P0C7V8 631 aa23.84■■□□□ 1.41
GFAP-222ENST00000592320 ZCCHC6Q5VYS8 1495 aaKnown RBP23.73■■□□□ 1.39
GFAP-222ENST00000592320 UNC13AQ9UPW8 1703 aa23.68■■□□□ 1.38
GFAP-222ENST00000592320 BICRAQ9NZM4 1560 aa23.58■■□□□ 1.37
GFAP-222ENST00000592320 DCAF1Q9Y4B6 1507 aa23.5■■□□□ 1.35
GFAP-222ENST00000592320 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
GFAP-222ENST00000592320 CECR2Q9BXF3 1484 aa23.27■■□□□ 1.32
GFAP-222ENST00000592320 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
GFAP-222ENST00000592320 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
GFAP-222ENST00000592320 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
GFAP-222ENST00000592320 DNAJC5Q9H3Z4 198 aa22.99■■□□□ 1.27
GFAP-222ENST00000592320 SCRIBQ14160 1630 aa22.99■■□□□ 1.27
GFAP-222ENST00000592320 CUX2O14529 1486 aa22.41■■□□□ 1.18
GFAP-222ENST00000592320 ERCC6Q03468 1493 aa22.31■■□□□ 1.16
GFAP-222ENST00000592320 NCAPD3P42695 1498 aa22.16■■□□□ 1.14
GFAP-222ENST00000592320 ATAD2BQ9ULI0 1458 aa22.03■■□□□ 1.12
GFAP-222ENST00000592320 NESP48681 1621 aa21.98■■□□□ 1.11
GFAP-222ENST00000592320 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
GFAP-222ENST00000592320 HMGXB3Q12766 1538 aa21.95■■□□□ 1.1
GFAP-222ENST00000592320 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
GFAP-222ENST00000592320 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
GFAP-222ENST00000592320 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
GFAP-222ENST00000592320 THOC2Q8NI27 1593 aaKnown RBP21.84■■□□□ 1.09
GFAP-222ENST00000592320 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
GFAP-222ENST00000592320 TRIM41Q8WV44 630 aa21.8■■□□□ 1.08
GFAP-222ENST00000592320 RSF1Q96T23 1441 aaPredicted RBP21.79■■□□□ 1.08
GFAP-222ENST00000592320 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
GFAP-222ENST00000592320 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
GFAP-222ENST00000592320 PDS5BQ9NTI5 1447 aa21.66■■□□□ 1.06
GFAP-222ENST00000592320 KIF21AQ7Z4S6 1674 aa21.66■■□□□ 1.06
GFAP-222ENST00000592320 WIZO95785 1651 aa21.63■■□□□ 1.05
GFAP-222ENST00000592320 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
GFAP-222ENST00000592320 MRC2Q9UBG0 1479 aa21.5■■□□□ 1.03
GFAP-222ENST00000592320 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
GFAP-222ENST00000592320 TOP2AP11388 1531 aaKnown RBP21.46■■□□□ 1.03
GFAP-222ENST00000592320 WDR62O43379 1518 aa21.45■■□□□ 1.02
GFAP-222ENST00000592320 OSCARQ8IYS5 282 aa21.34■■□□□ 1.01
GFAP-222ENST00000592320 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
GFAP-222ENST00000592320 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
GFAP-222ENST00000592320 CCDC88BA6NC98 1476 aa21.2■□□□□ 0.98
GFAP-222ENST00000592320 CFTRP13569 1480 aa21.13■□□□□ 0.97
GFAP-222ENST00000592320 URB2Q14146 1524 aaKnown RBP21.09■□□□□ 0.97
GFAP-222ENST00000592320 RIMBP3CA6NJZ7 1639 aa21.07■□□□□ 0.96
GFAP-222ENST00000592320 RIMBP3BA6NNM3 1639 aa21.07■□□□□ 0.96
GFAP-222ENST00000592320 RIMBP3Q9UFD9 1639 aa21.07■□□□□ 0.96
GFAP-222ENST00000592320 ARHGEF11O15085 1522 aa20.97■□□□□ 0.95
GFAP-222ENST00000592320 ZNF608Q9ULD9 1512 aaPredicted RBP20.92■□□□□ 0.94
GFAP-222ENST00000592320 IFT140Q96RY7 1462 aa20.9■□□□□ 0.94
GFAP-222ENST00000592320 CYB5RLQ6IPT4 315 aa20.87■□□□□ 0.93
GFAP-222ENST00000592320 TRHP20396 242 aaPredicted RBP20.83■□□□□ 0.93
GFAP-222ENST00000592320 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
GFAP-222ENST00000592320 TOPBP1Q92547 1522 aa20.77■□□□□ 0.92
GFAP-222ENST00000592320 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
GFAP-222ENST00000592320 ARAP1Q96P48 1450 aa20.73■□□□□ 0.91
GFAP-222ENST00000592320 ABCC8Q09428 1581 aa20.7■□□□□ 0.9
GFAP-222ENST00000592320 CHD1O14646 1710 aa20.69■□□□□ 0.9
GFAP-222ENST00000592320 FBLN2P98095 1184 aa20.68■□□□□ 0.9
GFAP-222ENST00000592320 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.9
GFAP-222ENST00000592320 DNMBPQ6XZF7 1577 aa20.65■□□□□ 0.9
GFAP-222ENST00000592320 TARBP1Q13395 1621 aaKnown RBP20.6■□□□□ 0.89
GFAP-222ENST00000592320 AEBP2Q6ZN18 517 aaPredicted RBP20.6■□□□□ 0.89
GFAP-222ENST00000592320 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
GFAP-222ENST00000592320 POLA1P09884 1462 aaPredicted RBP20.53■□□□□ 0.88
GFAP-222ENST00000592320 CUX1P39880 1505 aa20.49■□□□□ 0.87
GFAP-222ENST00000592320 RAD54L2Q9Y4B4 1467 aa20.48■□□□□ 0.87
GFAP-222ENST00000592320 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
GFAP-222ENST00000592320 SNAPC4Q5SXM2 1469 aa20.45■□□□□ 0.86
GFAP-222ENST00000592320 CLASP1Q7Z460 1538 aa20.45■□□□□ 0.86
GFAP-222ENST00000592320 SOGA1O94964 1423 aa20.44■□□□□ 0.86
GFAP-222ENST00000592320 SYNJ1O43426 1573 aa20.44■□□□□ 0.86
GFAP-222ENST00000592320 CHMP7Q8WUX9 453 aaPredicted RBP20.43■□□□□ 0.86
GFAP-222ENST00000592320 TOP2BQ02880 1626 aa20.42■□□□□ 0.86
GFAP-222ENST00000592320 BIVM-ERCC5R4GMW8 1640 aa20.4■□□□□ 0.86
GFAP-222ENST00000592320 CHIC1Q5VXU3 224 aa20.37■□□□□ 0.85
GFAP-222ENST00000592320 WDR97A6NE52 1622 aa20.37■□□□□ 0.85
GFAP-222ENST00000592320 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
GFAP-222ENST00000592320 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
GFAP-222ENST00000592320 GRIN2BQ13224 1484 aa20.32■□□□□ 0.84
GFAP-222ENST00000592320 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
GFAP-222ENST00000592320 GAPVD1Q14C86 1478 aa20.3■□□□□ 0.84
GFAP-222ENST00000592320 ABCA10Q8WWZ4 1543 aa20.2■□□□□ 0.82
GFAP-222ENST00000592320 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
GFAP-222ENST00000592320 ERCC6L2Q5T890 1561 aa20.1■□□□□ 0.81
GFAP-222ENST00000592320 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
GFAP-222ENST00000592320 ABCA5Q8WWZ7 1642 aa20.06■□□□□ 0.8
GFAP-222ENST00000592320 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
GFAP-222ENST00000592320 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
GFAP-222ENST00000592320 NUP160Q12769 1436 aa20■□□□□ 0.79
GFAP-222ENST00000592320 RUSC2Q8N2Y8 1516 aa19.99■□□□□ 0.79
GFAP-222ENST00000592320 EEA1Q15075 1411 aa19.99■□□□□ 0.79
GFAP-222ENST00000592320 ADAMTS12P58397 1594 aa19.96■□□□□ 0.79
GFAP-222ENST00000592320 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
GFAP-222ENST00000592320 SHROOM2Q13796 1616 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms