RNA–Protein interactions for RNA: ENST00000592169.2

PSME3-213, Transcript of proteasome activator subunit 3, humanhuman

TSL 3 BASIC

Gene PSME3, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-213ENST00000592169 NISCHQ9Y2I1 1504 aa30.34■■■□□ 2.45
PSME3-213ENST00000592169 ABCC9O60706 1549 aa27.81■■■□□ 2.04
PSME3-213ENST00000592169 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
PSME3-213ENST00000592169 DNAJC5BQ9UF47 199 aa26.58■■□□□ 1.85
PSME3-213ENST00000592169 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
PSME3-213ENST00000592169 NACADO15069 1562 aa25.98■■□□□ 1.75
PSME3-213ENST00000592169 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
PSME3-213ENST00000592169 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
PSME3-213ENST00000592169 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
PSME3-213ENST00000592169 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.69
PSME3-213ENST00000592169 MYO15BQ96JP2 1530 aa25.52■■□□□ 1.68
PSME3-213ENST00000592169 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
PSME3-213ENST00000592169 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
PSME3-213ENST00000592169 CC2D2AQ9P2K1 1620 aa25.09■■□□□ 1.61
PSME3-213ENST00000592169 CECR2Q9BXF3 1484 aa25.09■■□□□ 1.61
PSME3-213ENST00000592169 ZCCHC6Q5VYS8 1495 aaKnown RBP25.06■■□□□ 1.6
PSME3-213ENST00000592169 DCAF1Q9Y4B6 1507 aa25.03■■□□□ 1.6
PSME3-213ENST00000592169 EIF4G1Q04637 1599 aaKnown RBP24.94■■□□□ 1.58
PSME3-213ENST00000592169 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
PSME3-213ENST00000592169 DNAJC5Q9H3Z4 198 aa24.65■■□□□ 1.54
PSME3-213ENST00000592169 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
PSME3-213ENST00000592169 CUX2O14529 1486 aa24.13■■□□□ 1.45
PSME3-213ENST00000592169 NCAPD3P42695 1498 aa24.05■■□□□ 1.44
PSME3-213ENST00000592169 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
PSME3-213ENST00000592169 ATAD2BQ9ULI0 1458 aa23.91■■□□□ 1.42
PSME3-213ENST00000592169 NESP48681 1621 aa23.81■■□□□ 1.4
PSME3-213ENST00000592169 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
PSME3-213ENST00000592169 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
PSME3-213ENST00000592169 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
PSME3-213ENST00000592169 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
PSME3-213ENST00000592169 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
PSME3-213ENST00000592169 BAZ1AQ9NRL2 1556 aaPredicted RBP23.54■■□□□ 1.36
PSME3-213ENST00000592169 PEG3Q9GZU2 1588 aa23.53■■□□□ 1.36
PSME3-213ENST00000592169 LAMC3Q9Y6N6 1575 aa23.51■■□□□ 1.35
PSME3-213ENST00000592169 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
PSME3-213ENST00000592169 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
PSME3-213ENST00000592169 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.33
PSME3-213ENST00000592169 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
PSME3-213ENST00000592169 CADPSQ9ULU8 1353 aa23.28■■□□□ 1.32
PSME3-213ENST00000592169 MRC2Q9UBG0 1479 aa23.23■■□□□ 1.31
PSME3-213ENST00000592169 WDR62O43379 1518 aa23.2■■□□□ 1.3
PSME3-213ENST00000592169 WIZO95785 1651 aa23.05■■□□□ 1.28
PSME3-213ENST00000592169 CEP164Q9UPV0 1460 aa23.03■■□□□ 1.28
PSME3-213ENST00000592169 FANCD2Q9BXW9 1451 aa22.99■■□□□ 1.27
PSME3-213ENST00000592169 OSCARQ8IYS5 282 aa22.96■■□□□ 1.27
PSME3-213ENST00000592169 CFTRP13569 1480 aa22.93■■□□□ 1.26
PSME3-213ENST00000592169 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
PSME3-213ENST00000592169 RSF1Q96T23 1441 aaPredicted RBP22.77■■□□□ 1.24
PSME3-213ENST00000592169 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
PSME3-213ENST00000592169 RIMBP3CA6NJZ7 1639 aa22.7■■□□□ 1.22
PSME3-213ENST00000592169 RIMBP3BA6NNM3 1639 aa22.7■■□□□ 1.22
PSME3-213ENST00000592169 RIMBP3Q9UFD9 1639 aa22.7■■□□□ 1.22
PSME3-213ENST00000592169 ZNF608Q9ULD9 1512 aaPredicted RBP22.66■■□□□ 1.22
PSME3-213ENST00000592169 ARHGEF11O15085 1522 aa22.61■■□□□ 1.21
PSME3-213ENST00000592169 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
PSME3-213ENST00000592169 PRDM2Q13029 1718 aa22.54■■□□□ 1.2
PSME3-213ENST00000592169 TOPBP1Q92547 1522 aa22.52■■□□□ 1.19
PSME3-213ENST00000592169 CCDC88BA6NC98 1476 aa22.51■■□□□ 1.19
PSME3-213ENST00000592169 CYB5RLQ6IPT4 315 aa22.46■■□□□ 1.19
PSME3-213ENST00000592169 EIF4G3O43432 1585 aaKnown RBP22.45■■□□□ 1.18
PSME3-213ENST00000592169 ABCC8Q09428 1581 aa22.39■■□□□ 1.18
PSME3-213ENST00000592169 AQRO60306 1485 aaKnown RBP eCLIP22.38■■□□□ 1.174e-7■■■■□ 21.8
PSME3-213ENST00000592169 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
PSME3-213ENST00000592169 DNMBPQ6XZF7 1577 aa22.37■■□□□ 1.17
PSME3-213ENST00000592169 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
PSME3-213ENST00000592169 CHD1O14646 1710 aa22.34■■□□□ 1.17
PSME3-213ENST00000592169 TRHP20396 242 aaPredicted RBP22.28■■□□□ 1.16
PSME3-213ENST00000592169 POLA1P09884 1462 aaPredicted RBP22.27■■□□□ 1.16
PSME3-213ENST00000592169 FBLN2P98095 1184 aa22.25■■□□□ 1.15
PSME3-213ENST00000592169 RAD54L2Q9Y4B4 1467 aa22.21■■□□□ 1.15
PSME3-213ENST00000592169 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
PSME3-213ENST00000592169 SOGA1O94964 1423 aa22.14■■□□□ 1.14
PSME3-213ENST00000592169 CLASP1Q7Z460 1538 aa22.14■■□□□ 1.13
PSME3-213ENST00000592169 SNAPC4Q5SXM2 1469 aa22.12■■□□□ 1.13
PSME3-213ENST00000592169 FGD5Q6ZNL6 1462 aa22.05■■□□□ 1.12
PSME3-213ENST00000592169 WDR97A6NE52 1622 aa22.04■■□□□ 1.12
PSME3-213ENST00000592169 MAGI1Q96QZ7 1491 aaPredicted RBP22.03■■□□□ 1.12
PSME3-213ENST00000592169 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
PSME3-213ENST00000592169 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
PSME3-213ENST00000592169 CUX1P39880 1505 aa22■■□□□ 1.11
PSME3-213ENST00000592169 GRIN2BQ13224 1484 aa21.99■■□□□ 1.11
PSME3-213ENST00000592169 SYNJ2O15056 1496 aa21.97■■□□□ 1.11
PSME3-213ENST00000592169 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
PSME3-213ENST00000592169 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
PSME3-213ENST00000592169 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
PSME3-213ENST00000592169 ABCA10Q8WWZ4 1543 aa21.79■■□□□ 1.08
PSME3-213ENST00000592169 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
PSME3-213ENST00000592169 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
PSME3-213ENST00000592169 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
PSME3-213ENST00000592169 NUP160Q12769 1436 aa21.7■■□□□ 1.06
PSME3-213ENST00000592169 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
PSME3-213ENST00000592169 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
PSME3-213ENST00000592169 SHROOM2Q13796 1616 aa21.62■■□□□ 1.05
PSME3-213ENST00000592169 WRNQ14191 1432 aaPredicted RBP eCLIP21.6■■□□□ 1.05
PSME3-213ENST00000592169 FHAD1B1AJZ9 1412 aa21.57■■□□□ 1.04
PSME3-213ENST00000592169 KIF13AQ9H1H9 1805 aa21.53■■□□□ 1.04
PSME3-213ENST00000592169 PHF23Q9BUL5 403 aaPredicted RBP21.52■■□□□ 1.04
PSME3-213ENST00000592169 TOP2BQ02880 1626 aa21.49■■□□□ 1.03
PSME3-213ENST00000592169 ERICH3Q5RHP9 1530 aa21.49■■□□□ 1.03
PSME3-213ENST00000592169 PRG4Q92954 1404 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms