RNA–Protein interactions for RNA: ENST00000592159.1

KDM4B-209, Transcript of lysine demethylase 4B, humanhuman

TSL 3

Gene KDM4B, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-209ENST00000592159 NISCHQ9Y2I1 1504 aa22.98■■□□□ 1.27
KDM4B-209ENST00000592159 ABCC9O60706 1549 aa20.95■□□□□ 0.94
KDM4B-209ENST00000592159 CCDC180Q9P1Z9 1646 aa20.63■□□□□ 0.89
KDM4B-209ENST00000592159 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
KDM4B-209ENST00000592159 RB1CC1Q8TDY2 1594 aa19.81■□□□□ 0.76
KDM4B-209ENST00000592159 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
KDM4B-209ENST00000592159 NACADO15069 1562 aa19.61■□□□□ 0.73
KDM4B-209ENST00000592159 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.72
KDM4B-209ENST00000592159 UNC13AQ9UPW8 1703 aa19.29■□□□□ 0.68
KDM4B-209ENST00000592159 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
KDM4B-209ENST00000592159 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
KDM4B-209ENST00000592159 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
KDM4B-209ENST00000592159 DCAF1Q9Y4B6 1507 aa18.91■□□□□ 0.62
KDM4B-209ENST00000592159 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
KDM4B-209ENST00000592159 SHROOM4Q9ULL8 1493 aa18.87■□□□□ 0.61
KDM4B-209ENST00000592159 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
KDM4B-209ENST00000592159 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
KDM4B-209ENST00000592159 AEBP2Q6ZN18 517 aaPredicted RBP18.82■□□□□ 0.6
KDM4B-209ENST00000592159 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
KDM4B-209ENST00000592159 DNAJC5Q9H3Z4 198 aa18.39■□□□□ 0.53
KDM4B-209ENST00000592159 ERCC6Q03468 1493 aa18.14■□□□□ 0.49
KDM4B-209ENST00000592159 NCAPD3P42695 1498 aa18.12■□□□□ 0.49
KDM4B-209ENST00000592159 CUX2O14529 1486 aa18.08■□□□□ 0.49
KDM4B-209ENST00000592159 ATAD2BQ9ULI0 1458 aa18.04■□□□□ 0.48
KDM4B-209ENST00000592159 SMARCA2P51531 1590 aa17.97■□□□□ 0.47
KDM4B-209ENST00000592159 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
KDM4B-209ENST00000592159 NESP48681 1621 aa17.91■□□□□ 0.46
KDM4B-209ENST00000592159 HMGXB3Q12766 1538 aa17.91■□□□□ 0.46
KDM4B-209ENST00000592159 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
KDM4B-209ENST00000592159 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
KDM4B-209ENST00000592159 LAMC3Q9Y6N6 1575 aa17.73■□□□□ 0.43
KDM4B-209ENST00000592159 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
KDM4B-209ENST00000592159 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
KDM4B-209ENST00000592159 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
KDM4B-209ENST00000592159 THOC2Q8NI27 1593 aaKnown RBP17.68■□□□□ 0.42
KDM4B-209ENST00000592159 KIF21AQ7Z4S6 1674 aa17.63■□□□□ 0.41
KDM4B-209ENST00000592159 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
KDM4B-209ENST00000592159 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
KDM4B-209ENST00000592159 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
KDM4B-209ENST00000592159 MRC2Q9UBG0 1479 aa17.51■□□□□ 0.39
KDM4B-209ENST00000592159 WIZO95785 1651 aa17.49■□□□□ 0.39
KDM4B-209ENST00000592159 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
KDM4B-209ENST00000592159 WDR62O43379 1518 aa17.42■□□□□ 0.38
KDM4B-209ENST00000592159 FANCD2Q9BXW9 1451 aa17.38■□□□□ 0.37
KDM4B-209ENST00000592159 OSCARQ8IYS5 282 aa17.37■□□□□ 0.37
KDM4B-209ENST00000592159 CFTRP13569 1480 aa17.31■□□□□ 0.36
KDM4B-209ENST00000592159 RSF1Q96T23 1441 aaPredicted RBP17.29■□□□□ 0.36
KDM4B-209ENST00000592159 SUPT5HO00267 1087 aaKnown RBP17.25■□□□□ 0.35
KDM4B-209ENST00000592159 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
KDM4B-209ENST00000592159 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
KDM4B-209ENST00000592159 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
KDM4B-209ENST00000592159 IFT140Q96RY7 1462 aa17.07■□□□□ 0.32
KDM4B-209ENST00000592159 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
KDM4B-209ENST00000592159 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
KDM4B-209ENST00000592159 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
KDM4B-209ENST00000592159 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
KDM4B-209ENST00000592159 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
KDM4B-209ENST00000592159 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
KDM4B-209ENST00000592159 FBLN2P98095 1184 aa17■□□□□ 0.31
KDM4B-209ENST00000592159 ABCC8Q09428 1581 aa17■□□□□ 0.31
KDM4B-209ENST00000592159 CYB5RLQ6IPT4 315 aa17■□□□□ 0.31
KDM4B-209ENST00000592159 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
KDM4B-209ENST00000592159 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■□□□□ 10.7
KDM4B-209ENST00000592159 TRHP20396 242 aaPredicted RBP16.93■□□□□ 0.3
KDM4B-209ENST00000592159 DNMBPQ6XZF7 1577 aa16.92■□□□□ 0.3
KDM4B-209ENST00000592159 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
KDM4B-209ENST00000592159 CHD1O14646 1710 aa16.84■□□□□ 0.29
KDM4B-209ENST00000592159 SOGA1O94964 1423 aa16.83■□□□□ 0.28
KDM4B-209ENST00000592159 TARBP1Q13395 1621 aaKnown RBP16.83■□□□□ 0.28
KDM4B-209ENST00000592159 TDRD9Q8NDG6 1382 aaKnown RBP16.82■□□□□ 0.28
KDM4B-209ENST00000592159 POLA1P09884 1462 aaPredicted RBP16.81■□□□□ 0.28
KDM4B-209ENST00000592159 RAD54L2Q9Y4B4 1467 aa16.81■□□□□ 0.28
KDM4B-209ENST00000592159 CHMP7Q8WUX9 453 aaPredicted RBP16.8■□□□□ 0.28
KDM4B-209ENST00000592159 ARAP1Q96P48 1450 aa16.76■□□□□ 0.27
KDM4B-209ENST00000592159 SNAPC4Q5SXM2 1469 aa16.71■□□□□ 0.27
KDM4B-209ENST00000592159 FGD5Q6ZNL6 1462 aa16.7■□□□□ 0.26
KDM4B-209ENST00000592159 GRIN2BQ13224 1484 aa16.66■□□□□ 0.26
KDM4B-209ENST00000592159 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
KDM4B-209ENST00000592159 MAGI1Q96QZ7 1491 aaPredicted RBP16.64■□□□□ 0.25
KDM4B-209ENST00000592159 CUX1P39880 1505 aa16.64■□□□□ 0.25
KDM4B-209ENST00000592159 WDR97A6NE52 1622 aa16.63■□□□□ 0.25
KDM4B-209ENST00000592159 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
KDM4B-209ENST00000592159 SYNJ2O15056 1496 aa16.6■□□□□ 0.25
KDM4B-209ENST00000592159 GAPVD1Q14C86 1478 aa16.58■□□□□ 0.24
KDM4B-209ENST00000592159 PBRM1Q86U86 1689 aa16.51■□□□□ 0.23
KDM4B-209ENST00000592159 ABCA10Q8WWZ4 1543 aa16.49■□□□□ 0.23
KDM4B-209ENST00000592159 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
KDM4B-209ENST00000592159 ABCA5Q8WWZ7 1642 aa16.42■□□□□ 0.22
KDM4B-209ENST00000592159 GRIN2AQ12879 1464 aa16.42■□□□□ 0.22
KDM4B-209ENST00000592159 ERCC6L2Q5T890 1561 aa16.38■□□□□ 0.21
KDM4B-209ENST00000592159 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
KDM4B-209ENST00000592159 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
KDM4B-209ENST00000592159 NUP160Q12769 1436 aa16.34■□□□□ 0.21
KDM4B-209ENST00000592159 ADAMTS12P58397 1594 aa16.33■□□□□ 0.2
KDM4B-209ENST00000592159 JPH4Q96JJ6 628 aa16.32■□□□□ 0.2
KDM4B-209ENST00000592159 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
KDM4B-209ENST00000592159 NPM1P06748 294 aaKnown RBP eCLIP16.3■□□□□ 0.2
KDM4B-209ENST00000592159 BIVM-ERCC5R4GMW8 1640 aa16.29■□□□□ 0.2
KDM4B-209ENST00000592159 PRG4Q92954 1404 aaPredicted RBP16.28■□□□□ 0.2
KDM4B-209ENST00000592159 ERICH3Q5RHP9 1530 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms