RNA–Protein interactions for RNA: ENST00000591798.5

DNMT1-225, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-225ENST00000591798 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
DNMT1-225ENST00000591798 ABCC9O60706 1549 aa20.6■□□□□ 0.89
DNMT1-225ENST00000591798 CCDC180Q9P1Z9 1646 aa20.21■□□□□ 0.83
DNMT1-225ENST00000591798 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
DNMT1-225ENST00000591798 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
DNMT1-225ENST00000591798 NACADO15069 1562 aa19.19■□□□□ 0.66
DNMT1-225ENST00000591798 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
DNMT1-225ENST00000591798 UNC13AQ9UPW8 1703 aa19.06■□□□□ 0.64
DNMT1-225ENST00000591798 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
DNMT1-225ENST00000591798 BICRAQ9NZM4 1560 aa18.89■□□□□ 0.62
DNMT1-225ENST00000591798 AEBP2Q6ZN18 517 aaPredicted RBP18.83■□□□□ 0.6
DNMT1-225ENST00000591798 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
DNMT1-225ENST00000591798 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
DNMT1-225ENST00000591798 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
DNMT1-225ENST00000591798 SHROOM4Q9ULL8 1493 aa18.59■□□□□ 0.57
DNMT1-225ENST00000591798 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
DNMT1-225ENST00000591798 DNAJC5Q9H3Z4 198 aa18.45■□□□□ 0.54
DNMT1-225ENST00000591798 DCAF1Q9Y4B6 1507 aa18.37■□□□□ 0.53
DNMT1-225ENST00000591798 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
DNMT1-225ENST00000591798 ZCCHC6Q5VYS8 1495 aaKnown RBP18.35■□□□□ 0.53
DNMT1-225ENST00000591798 CUX2O14529 1486 aa17.97■□□□□ 0.47
DNMT1-225ENST00000591798 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
DNMT1-225ENST00000591798 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
DNMT1-225ENST00000591798 NCAPD3P42695 1498 aa17.7■□□□□ 0.42
DNMT1-225ENST00000591798 ATAD2BQ9ULI0 1458 aa17.59■□□□□ 0.41
DNMT1-225ENST00000591798 NESP48681 1621 aa17.58■□□□□ 0.4
DNMT1-225ENST00000591798 HMGXB3Q12766 1538 aa17.56■□□□□ 0.4
DNMT1-225ENST00000591798 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
DNMT1-225ENST00000591798 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
DNMT1-225ENST00000591798 SMARCA4P51532 1647 aa17.48■□□□□ 0.39
DNMT1-225ENST00000591798 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
DNMT1-225ENST00000591798 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
DNMT1-225ENST00000591798 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
DNMT1-225ENST00000591798 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
DNMT1-225ENST00000591798 PEG3Q9GZU2 1588 aa17.32■□□□□ 0.36
DNMT1-225ENST00000591798 BAZ1AQ9NRL2 1556 aaPredicted RBP17.31■□□□□ 0.36
DNMT1-225ENST00000591798 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
DNMT1-225ENST00000591798 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
DNMT1-225ENST00000591798 WDR62O43379 1518 aa17.16■□□□□ 0.34
DNMT1-225ENST00000591798 MROH2BQ7Z745 1585 aa17.14■□□□□ 0.33
DNMT1-225ENST00000591798 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
DNMT1-225ENST00000591798 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
DNMT1-225ENST00000591798 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
DNMT1-225ENST00000591798 FANCD2Q9BXW9 1451 aa16.95■□□□□ 0.3
DNMT1-225ENST00000591798 WIZO95785 1651 aa16.93■□□□□ 0.3
DNMT1-225ENST00000591798 RIMBP3CA6NJZ7 1639 aa16.92■□□□□ 0.3
DNMT1-225ENST00000591798 RIMBP3BA6NNM3 1639 aa16.92■□□□□ 0.3
DNMT1-225ENST00000591798 RIMBP3Q9UFD9 1639 aa16.92■□□□□ 0.3
DNMT1-225ENST00000591798 CFTRP13569 1480 aa16.86■□□□□ 0.29
DNMT1-225ENST00000591798 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
DNMT1-225ENST00000591798 ARHGEF11O15085 1522 aa16.8■□□□□ 0.28
DNMT1-225ENST00000591798 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
DNMT1-225ENST00000591798 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
DNMT1-225ENST00000591798 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
DNMT1-225ENST00000591798 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
DNMT1-225ENST00000591798 CYB5RLQ6IPT4 315 aa16.66■□□□□ 0.26
DNMT1-225ENST00000591798 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
DNMT1-225ENST00000591798 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
DNMT1-225ENST00000591798 CHD1O14646 1710 aa16.61■□□□□ 0.25
DNMT1-225ENST00000591798 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
DNMT1-225ENST00000591798 RSF1Q96T23 1441 aaPredicted RBP16.6■□□□□ 0.25
DNMT1-225ENST00000591798 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
DNMT1-225ENST00000591798 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
DNMT1-225ENST00000591798 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
DNMT1-225ENST00000591798 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
DNMT1-225ENST00000591798 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.231e-6■■■■■ 27.8
DNMT1-225ENST00000591798 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
DNMT1-225ENST00000591798 FBLN2P98095 1184 aa16.44■□□□□ 0.22
DNMT1-225ENST00000591798 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
DNMT1-225ENST00000591798 CLASP1Q7Z460 1538 aa16.38■□□□□ 0.21
DNMT1-225ENST00000591798 SYNJ1O43426 1573 aa16.32■□□□□ 0.2
DNMT1-225ENST00000591798 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
DNMT1-225ENST00000591798 SNAPC4Q5SXM2 1469 aa16.31■□□□□ 0.2
DNMT1-225ENST00000591798 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
DNMT1-225ENST00000591798 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
DNMT1-225ENST00000591798 SOGA1O94964 1423 aa16.28■□□□□ 0.2
DNMT1-225ENST00000591798 MAGI1Q96QZ7 1491 aaPredicted RBP16.26■□□□□ 0.19
DNMT1-225ENST00000591798 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
DNMT1-225ENST00000591798 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
DNMT1-225ENST00000591798 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
DNMT1-225ENST00000591798 SYNJ2O15056 1496 aa16.21■□□□□ 0.19
DNMT1-225ENST00000591798 GRIN2BQ13224 1484 aa16.21■□□□□ 0.19
DNMT1-225ENST00000591798 PBRM1Q86U86 1689 aa16.17■□□□□ 0.18
DNMT1-225ENST00000591798 CUX1P39880 1505 aa16.14■□□□□ 0.17
DNMT1-225ENST00000591798 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
DNMT1-225ENST00000591798 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
DNMT1-225ENST00000591798 KIF13AQ9H1H9 1805 aa16.05■□□□□ 0.16
DNMT1-225ENST00000591798 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
DNMT1-225ENST00000591798 CEP170Q5SW79 1584 aa16.02■□□□□ 0.16
DNMT1-225ENST00000591798 ABCA10Q8WWZ4 1543 aa16.01■□□□□ 0.15
DNMT1-225ENST00000591798 GRIN2AQ12879 1464 aa16■□□□□ 0.15
DNMT1-225ENST00000591798 SHROOM2Q13796 1616 aa15.98■□□□□ 0.15
DNMT1-225ENST00000591798 NUP160Q12769 1436 aa15.97■□□□□ 0.15
DNMT1-225ENST00000591798 ADAMTS12P58397 1594 aa15.96■□□□□ 0.14
DNMT1-225ENST00000591798 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
DNMT1-225ENST00000591798 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
DNMT1-225ENST00000591798 ABCC10Q5T3U5 1492 aa15.85■□□□□ 0.13
DNMT1-225ENST00000591798 WRNQ14191 1432 aaPredicted RBP eCLIP15.84■□□□□ 0.13
DNMT1-225ENST00000591798 PRG4Q92954 1404 aaPredicted RBP15.84■□□□□ 0.13
DNMT1-225ENST00000591798 FAM69CQ0P6D2 419 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms