RNA–Protein interactions for RNA: ENST00000591745.1

LSM7-207, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 543 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-207ENST00000591745 NISCHQ9Y2I1 1504 aa32.78■■■□□ 2.84
LSM7-207ENST00000591745 ABCC9O60706 1549 aa30.38■■■□□ 2.45
LSM7-207ENST00000591745 CCDC180Q9P1Z9 1646 aa29.74■■■□□ 2.35
LSM7-207ENST00000591745 DNAJC5BQ9UF47 199 aa29.15■■■□□ 2.26
LSM7-207ENST00000591745 CHIC1Q5VXU3 224 aa28.64■■■□□ 2.18
LSM7-207ENST00000591745 AEBP2Q6ZN18 517 aaPredicted RBP28.55■■■□□ 2.16
LSM7-207ENST00000591745 RB1CC1Q8TDY2 1594 aa28.54■■■□□ 2.16
LSM7-207ENST00000591745 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
LSM7-207ENST00000591745 NACADO15069 1562 aa28.17■■■□□ 2.1
LSM7-207ENST00000591745 PABPN1Q86U42 306 aaKnown RBP eCLIP28.13■■■□□ 2.09
LSM7-207ENST00000591745 BICRAQ9NZM4 1560 aa27.93■■■□□ 2.06
LSM7-207ENST00000591745 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
LSM7-207ENST00000591745 MYO15BQ96JP2 1530 aa27.53■■■□□ 2
LSM7-207ENST00000591745 CC2D2AQ9P2K1 1620 aa27.44■■□□□ 1.98
LSM7-207ENST00000591745 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
LSM7-207ENST00000591745 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
LSM7-207ENST00000591745 EIF4G1Q04637 1599 aaKnown RBP27.19■■□□□ 1.94
LSM7-207ENST00000591745 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
LSM7-207ENST00000591745 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
LSM7-207ENST00000591745 DNAJC5Q9H3Z4 198 aa27.06■■□□□ 1.92
LSM7-207ENST00000591745 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
LSM7-207ENST00000591745 CUX2O14529 1486 aa26.34■■□□□ 1.81
LSM7-207ENST00000591745 ERCC6Q03468 1493 aa26.14■■□□□ 1.78
LSM7-207ENST00000591745 NCAPD3P42695 1498 aa26.02■■□□□ 1.76
LSM7-207ENST00000591745 NESP48681 1621 aa25.99■■□□□ 1.75
LSM7-207ENST00000591745 ATAD2BQ9ULI0 1458 aa25.9■■□□□ 1.74
LSM7-207ENST00000591745 THOC2Q8NI27 1593 aaKnown RBP25.87■■□□□ 1.73
LSM7-207ENST00000591745 HMGXB3Q12766 1538 aa25.81■■□□□ 1.72
LSM7-207ENST00000591745 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
LSM7-207ENST00000591745 SMARCA2P51531 1590 aa25.72■■□□□ 1.71
LSM7-207ENST00000591745 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
LSM7-207ENST00000591745 TRIM41Q8WV44 630 aa25.62■■□□□ 1.69
LSM7-207ENST00000591745 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
LSM7-207ENST00000591745 LAMC3Q9Y6N6 1575 aa25.56■■□□□ 1.68
LSM7-207ENST00000591745 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
LSM7-207ENST00000591745 BAZ1AQ9NRL2 1556 aaPredicted RBP25.44■■□□□ 1.66
LSM7-207ENST00000591745 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
LSM7-207ENST00000591745 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
LSM7-207ENST00000591745 WDR62O43379 1518 aa25.27■■□□□ 1.64
LSM7-207ENST00000591745 MRC2Q9UBG0 1479 aa25.26■■□□□ 1.63
LSM7-207ENST00000591745 CADPSQ9ULU8 1353 aa25.16■■□□□ 1.62
LSM7-207ENST00000591745 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
LSM7-207ENST00000591745 WIZO95785 1651 aa25.04■■□□□ 1.6
LSM7-207ENST00000591745 CEP164Q9UPV0 1460 aa25■■□□□ 1.59
LSM7-207ENST00000591745 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
LSM7-207ENST00000591745 RIMBP3CA6NJZ7 1639 aa24.94■■□□□ 1.58
LSM7-207ENST00000591745 RIMBP3BA6NNM3 1639 aa24.94■■□□□ 1.58
LSM7-207ENST00000591745 RIMBP3Q9UFD9 1639 aa24.94■■□□□ 1.58
LSM7-207ENST00000591745 OSCARQ8IYS5 282 aa24.92■■□□□ 1.58
LSM7-207ENST00000591745 URB2Q14146 1524 aaKnown RBP24.87■■□□□ 1.57
LSM7-207ENST00000591745 CFTRP13569 1480 aa24.79■■□□□ 1.56
LSM7-207ENST00000591745 ARHGEF11O15085 1522 aa24.72■■□□□ 1.55
LSM7-207ENST00000591745 ZNF608Q9ULD9 1512 aaPredicted RBP24.68■■□□□ 1.54
LSM7-207ENST00000591745 PRDM2Q13029 1718 aa24.64■■□□□ 1.54
LSM7-207ENST00000591745 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
LSM7-207ENST00000591745 EIF4G3O43432 1585 aaKnown RBP24.52■■□□□ 1.52
LSM7-207ENST00000591745 CHD1O14646 1710 aa24.52■■□□□ 1.52
LSM7-207ENST00000591745 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
LSM7-207ENST00000591745 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
LSM7-207ENST00000591745 RSF1Q96T23 1441 aaPredicted RBP24.48■■□□□ 1.51
LSM7-207ENST00000591745 CYB5RLQ6IPT4 315 aa24.46■■□□□ 1.51
LSM7-207ENST00000591745 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
LSM7-207ENST00000591745 TRHP20396 242 aaPredicted RBP24.34■■□□□ 1.49
LSM7-207ENST00000591745 TARBP1Q13395 1621 aaKnown RBP24.34■■□□□ 1.49
LSM7-207ENST00000591745 SENP3Q9H4L4 574 aaPredicted RBP24.31■■□□□ 1.48
LSM7-207ENST00000591745 AQRO60306 1485 aaKnown RBP eCLIP24.31■■□□□ 1.48
LSM7-207ENST00000591745 CCDC88BA6NC98 1476 aa24.3■■□□□ 1.48
LSM7-207ENST00000591745 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
LSM7-207ENST00000591745 SUPT5HO00267 1087 aaKnown RBP24.25■■□□□ 1.47
LSM7-207ENST00000591745 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
LSM7-207ENST00000591745 POLA1P09884 1462 aaPredicted RBP24.15■■□□□ 1.46
LSM7-207ENST00000591745 ABCC8Q09428 1581 aa24.15■■□□□ 1.46
LSM7-207ENST00000591745 FBLN2P98095 1184 aa24.13■■□□□ 1.45
LSM7-207ENST00000591745 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
LSM7-207ENST00000591745 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
LSM7-207ENST00000591745 TDRD9Q8NDG6 1382 aaKnown RBP24.02■■□□□ 1.44
LSM7-207ENST00000591745 SYNJ1O43426 1573 aa23.95■■□□□ 1.43
LSM7-207ENST00000591745 SOGA1O94964 1423 aa23.93■■□□□ 1.42
LSM7-207ENST00000591745 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
LSM7-207ENST00000591745 WDR97A6NE52 1622 aa23.89■■□□□ 1.42
LSM7-207ENST00000591745 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
LSM7-207ENST00000591745 PBRM1Q86U86 1689 aa23.85■■□□□ 1.41
LSM7-207ENST00000591745 GAPVD1Q14C86 1478 aa23.84■■□□□ 1.41
LSM7-207ENST00000591745 ERCC6L2Q5T890 1561 aa23.83■■□□□ 1.41
LSM7-207ENST00000591745 CUX1P39880 1505 aa23.83■■□□□ 1.41
LSM7-207ENST00000591745 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
LSM7-207ENST00000591745 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
LSM7-207ENST00000591745 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
LSM7-207ENST00000591745 KIF13AQ9H1H9 1805 aa23.69■■□□□ 1.38
LSM7-207ENST00000591745 ABCA5Q8WWZ7 1642 aa23.68■■□□□ 1.38
LSM7-207ENST00000591745 PLPPR3Q6T4P5 718 aa23.61■■□□□ 1.37
LSM7-207ENST00000591745 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
LSM7-207ENST00000591745 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
LSM7-207ENST00000591745 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
LSM7-207ENST00000591745 GRIN2AQ12879 1464 aa23.55■■□□□ 1.36
LSM7-207ENST00000591745 ADAMTS12P58397 1594 aa23.53■■□□□ 1.36
LSM7-207ENST00000591745 NUP160Q12769 1436 aa23.5■■□□□ 1.35
LSM7-207ENST00000591745 DIP2BQ9P265 1576 aa23.31■■□□□ 1.32
LSM7-207ENST00000591745 KDM4FA0A1W2PPD8 638 aa23.3■■□□□ 1.32
LSM7-207ENST00000591745 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms