RNA–Protein interactions for RNA: ENST00000591417.5

HKR1-222, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 4 BASIC

Gene HKR1, Length 525 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-222ENST00000591417 NISCHQ9Y2I1 1504 aa28.66■■■□□ 2.18
HKR1-222ENST00000591417 ABCC9O60706 1549 aa26.04■■□□□ 1.76
HKR1-222ENST00000591417 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
HKR1-222ENST00000591417 RB1CC1Q8TDY2 1594 aa24.73■■□□□ 1.55
HKR1-222ENST00000591417 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
HKR1-222ENST00000591417 NACADO15069 1562 aa24.5■■□□□ 1.51
HKR1-222ENST00000591417 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
HKR1-222ENST00000591417 PABPN1Q86U42 306 aaKnown RBP eCLIP24.24■■□□□ 1.47
HKR1-222ENST00000591417 UNC13AQ9UPW8 1703 aa24.07■■□□□ 1.44
HKR1-222ENST00000591417 MYO15BQ96JP2 1530 aa24.07■■□□□ 1.44
HKR1-222ENST00000591417 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
HKR1-222ENST00000591417 DCAF1Q9Y4B6 1507 aa23.67■■□□□ 1.38
HKR1-222ENST00000591417 ZCCHC6Q5VYS8 1495 aaKnown RBP23.67■■□□□ 1.38
HKR1-222ENST00000591417 SHROOM4Q9ULL8 1493 aa23.67■■□□□ 1.38
HKR1-222ENST00000591417 CC2D2AQ9P2K1 1620 aa23.51■■□□□ 1.35
HKR1-222ENST00000591417 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
HKR1-222ENST00000591417 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
HKR1-222ENST00000591417 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
HKR1-222ENST00000591417 DNAJC5Q9H3Z4 198 aa22.86■■□□□ 1.25
HKR1-222ENST00000591417 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
HKR1-222ENST00000591417 CUX2O14529 1486 aa22.58■■□□□ 1.2
HKR1-222ENST00000591417 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
HKR1-222ENST00000591417 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
HKR1-222ENST00000591417 SMARCA2P51531 1590 aa22.45■■□□□ 1.18
HKR1-222ENST00000591417 HMGXB3Q12766 1538 aa22.4■■□□□ 1.18
HKR1-222ENST00000591417 SMARCA4P51532 1647 aa22.39■■□□□ 1.17
HKR1-222ENST00000591417 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
HKR1-222ENST00000591417 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
HKR1-222ENST00000591417 NESP48681 1621 aa22.27■■□□□ 1.16
HKR1-222ENST00000591417 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
HKR1-222ENST00000591417 LAMC3Q9Y6N6 1575 aa22.14■■□□□ 1.13
HKR1-222ENST00000591417 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
HKR1-222ENST00000591417 THOC2Q8NI27 1593 aaKnown RBP22.07■■□□□ 1.12
HKR1-222ENST00000591417 MROH2BQ7Z745 1585 aa22.05■■□□□ 1.12
HKR1-222ENST00000591417 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
HKR1-222ENST00000591417 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
HKR1-222ENST00000591417 MRC2Q9UBG0 1479 aa21.83■■□□□ 1.09
HKR1-222ENST00000591417 WIZO95785 1651 aa21.78■■□□□ 1.08
HKR1-222ENST00000591417 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
HKR1-222ENST00000591417 WDR62O43379 1518 aa21.75■■□□□ 1.07
HKR1-222ENST00000591417 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
HKR1-222ENST00000591417 FANCD2Q9BXW9 1451 aa21.66■■□□□ 1.06
HKR1-222ENST00000591417 CFTRP13569 1480 aa21.6■■□□□ 1.05
HKR1-222ENST00000591417 OSCARQ8IYS5 282 aa21.59■■□□□ 1.05
HKR1-222ENST00000591417 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
HKR1-222ENST00000591417 TOP2AP11388 1531 aaKnown RBP21.5■■□□□ 1.03
HKR1-222ENST00000591417 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
HKR1-222ENST00000591417 PRDM2Q13029 1718 aa21.35■■□□□ 1.01
HKR1-222ENST00000591417 IFT140Q96RY7 1462 aa21.31■■□□□ 1
HKR1-222ENST00000591417 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
HKR1-222ENST00000591417 ABCC8Q09428 1581 aa21.24■□□□□ 0.99
HKR1-222ENST00000591417 ZNF608Q9ULD9 1512 aaPredicted RBP21.22■□□□□ 0.99
HKR1-222ENST00000591417 TOPBP1Q92547 1522 aa21.21■□□□□ 0.99
HKR1-222ENST00000591417 RIMBP3CA6NJZ7 1639 aa21.21■□□□□ 0.99
HKR1-222ENST00000591417 RIMBP3BA6NNM3 1639 aa21.21■□□□□ 0.99
HKR1-222ENST00000591417 RIMBP3Q9UFD9 1639 aa21.21■□□□□ 0.99
HKR1-222ENST00000591417 ARHGEF11O15085 1522 aa21.13■□□□□ 0.97
HKR1-222ENST00000591417 DNMBPQ6XZF7 1577 aa21.11■□□□□ 0.97
HKR1-222ENST00000591417 EIF4G3O43432 1585 aaKnown RBP21.09■□□□□ 0.97
HKR1-222ENST00000591417 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
HKR1-222ENST00000591417 FBLN2P98095 1184 aa21.05■□□□□ 0.96
HKR1-222ENST00000591417 AQRO60306 1485 aaKnown RBP eCLIP21.05■□□□□ 0.96
HKR1-222ENST00000591417 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
HKR1-222ENST00000591417 CHD1O14646 1710 aa20.99■□□□□ 0.95
HKR1-222ENST00000591417 POLA1P09884 1462 aaPredicted RBP20.96■□□□□ 0.95
HKR1-222ENST00000591417 TRHP20396 242 aaPredicted RBP20.96■□□□□ 0.95
HKR1-222ENST00000591417 SOGA1O94964 1423 aa20.94■□□□□ 0.94
HKR1-222ENST00000591417 RAD54L2Q9Y4B4 1467 aa20.89■□□□□ 0.94
HKR1-222ENST00000591417 TDRD9Q8NDG6 1382 aaKnown RBP20.89■□□□□ 0.93
HKR1-222ENST00000591417 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
HKR1-222ENST00000591417 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
HKR1-222ENST00000591417 WDR97A6NE52 1622 aa20.84■□□□□ 0.93
HKR1-222ENST00000591417 FGD5Q6ZNL6 1462 aa20.81■□□□□ 0.92
HKR1-222ENST00000591417 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
HKR1-222ENST00000591417 MAGI1Q96QZ7 1491 aaPredicted RBP20.78■□□□□ 0.92
HKR1-222ENST00000591417 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
HKR1-222ENST00000591417 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
HKR1-222ENST00000591417 CLASP1Q7Z460 1538 aa20.73■□□□□ 0.91
HKR1-222ENST00000591417 CUX1P39880 1505 aa20.73■□□□□ 0.91
HKR1-222ENST00000591417 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
HKR1-222ENST00000591417 GAPVD1Q14C86 1478 aa20.66■□□□□ 0.9
HKR1-222ENST00000591417 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
HKR1-222ENST00000591417 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.88
HKR1-222ENST00000591417 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
HKR1-222ENST00000591417 ABCA5Q8WWZ7 1642 aa20.52■□□□□ 0.88
HKR1-222ENST00000591417 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
HKR1-222ENST00000591417 WRNQ14191 1432 aaPredicted RBP eCLIP20.5■□□□□ 0.87
HKR1-222ENST00000591417 GRIN2AQ12879 1464 aa20.47■□□□□ 0.87
HKR1-222ENST00000591417 FHAD1B1AJZ9 1412 aa20.4■□□□□ 0.86
HKR1-222ENST00000591417 NUP160Q12769 1436 aa20.39■□□□□ 0.85
HKR1-222ENST00000591417 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
HKR1-222ENST00000591417 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
HKR1-222ENST00000591417 TOP2BQ02880 1626 aa20.36■□□□□ 0.85
HKR1-222ENST00000591417 ERCC6L2Q5T890 1561 aa20.36■□□□□ 0.85
HKR1-222ENST00000591417 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
HKR1-222ENST00000591417 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
HKR1-222ENST00000591417 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
HKR1-222ENST00000591417 JPH4Q96JJ6 628 aa20.28■□□□□ 0.84
HKR1-222ENST00000591417 PRG4Q92954 1404 aaPredicted RBP20.26■□□□□ 0.83
HKR1-222ENST00000591417 NPM1P06748 294 aaKnown RBP eCLIP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms