RNA–Protein interactions for RNA: ENST00000591050.1

GCDH-215, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 3

Gene GCDH, Length 423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-215ENST00000591050 NISCHQ9Y2I1 1504 aa21.65■■□□□ 1.06
GCDH-215ENST00000591050 ABCC9O60706 1549 aa19.66■□□□□ 0.74
GCDH-215ENST00000591050 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.72
GCDH-215ENST00000591050 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
GCDH-215ENST00000591050 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
GCDH-215ENST00000591050 NACADO15069 1562 aa18.47■□□□□ 0.55
GCDH-215ENST00000591050 UNC13AQ9UPW8 1703 aa18.41■□□□□ 0.54
GCDH-215ENST00000591050 DCAF8L2P0C7V8 631 aa18.24■□□□□ 0.51
GCDH-215ENST00000591050 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
GCDH-215ENST00000591050 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
GCDH-215ENST00000591050 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
GCDH-215ENST00000591050 ZCCHC6Q5VYS8 1495 aaKnown RBP17.91■□□□□ 0.46
GCDH-215ENST00000591050 DCAF1Q9Y4B6 1507 aa17.86■□□□□ 0.45
GCDH-215ENST00000591050 SHROOM4Q9ULL8 1493 aa17.82■□□□□ 0.44
GCDH-215ENST00000591050 SCRIBQ14160 1630 aa17.8■□□□□ 0.44
GCDH-215ENST00000591050 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
GCDH-215ENST00000591050 EIF4G1Q04637 1599 aaKnown RBP17.71■□□□□ 0.43
GCDH-215ENST00000591050 CECR2Q9BXF3 1484 aa17.71■□□□□ 0.43
GCDH-215ENST00000591050 DNAJC5Q9H3Z4 198 aa17.14■□□□□ 0.33
GCDH-215ENST00000591050 NCAPD3P42695 1498 aa17.02■□□□□ 0.32
GCDH-215ENST00000591050 CUX2O14529 1486 aa16.99■□□□□ 0.31
GCDH-215ENST00000591050 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
GCDH-215ENST00000591050 SMARCA4P51532 1647 aa16.96■□□□□ 0.31
GCDH-215ENST00000591050 ERCC6Q03468 1493 aa16.96■□□□□ 0.31
GCDH-215ENST00000591050 HMGXB3Q12766 1538 aa16.93■□□□□ 0.3
GCDH-215ENST00000591050 SMARCA2P51531 1590 aa16.92■□□□□ 0.3
GCDH-215ENST00000591050 NESP48681 1621 aa16.86■□□□□ 0.29
GCDH-215ENST00000591050 BAZ1AQ9NRL2 1556 aaPredicted RBP16.81■□□□□ 0.28
GCDH-215ENST00000591050 PEG3Q9GZU2 1588 aa16.79■□□□□ 0.28
GCDH-215ENST00000591050 BAZ1BQ9UIG0 1483 aaKnown RBP16.79■□□□□ 0.28
GCDH-215ENST00000591050 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
GCDH-215ENST00000591050 KIF21AQ7Z4S6 1674 aa16.74■□□□□ 0.27
GCDH-215ENST00000591050 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
GCDH-215ENST00000591050 MROH2BQ7Z745 1585 aa16.69■□□□□ 0.26
GCDH-215ENST00000591050 PDS5BQ9NTI5 1447 aa16.55■□□□□ 0.24
GCDH-215ENST00000591050 WIZO95785 1651 aa16.53■□□□□ 0.24
GCDH-215ENST00000591050 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
GCDH-215ENST00000591050 WDR62O43379 1518 aa16.46■□□□□ 0.23
GCDH-215ENST00000591050 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.23
GCDH-215ENST00000591050 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
GCDH-215ENST00000591050 FANCD2Q9BXW9 1451 aa16.33■□□□□ 0.2
GCDH-215ENST00000591050 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
GCDH-215ENST00000591050 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
GCDH-215ENST00000591050 CFTRP13569 1480 aa16.29■□□□□ 0.2
GCDH-215ENST00000591050 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
GCDH-215ENST00000591050 RSF1Q96T23 1441 aaPredicted RBP16.24■□□□□ 0.19
GCDH-215ENST00000591050 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
GCDH-215ENST00000591050 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
GCDH-215ENST00000591050 RIMBP3CA6NJZ7 1639 aa16.08■□□□□ 0.16
GCDH-215ENST00000591050 RIMBP3BA6NNM3 1639 aa16.08■□□□□ 0.16
GCDH-215ENST00000591050 RIMBP3Q9UFD9 1639 aa16.08■□□□□ 0.16
GCDH-215ENST00000591050 ZNF608Q9ULD9 1512 aaPredicted RBP16.05■□□□□ 0.16
GCDH-215ENST00000591050 CCDC88BA6NC98 1476 aa16.05■□□□□ 0.16
GCDH-215ENST00000591050 TOPBP1Q92547 1522 aa16.02■□□□□ 0.15
GCDH-215ENST00000591050 IFT140Q96RY7 1462 aa16.02■□□□□ 0.15
GCDH-215ENST00000591050 EIF4G3O43432 1585 aaKnown RBP16.01■□□□□ 0.15
GCDH-215ENST00000591050 CHD1O14646 1710 aa15.98■□□□□ 0.15
GCDH-215ENST00000591050 ARHGEF11O15085 1522 aa15.97■□□□□ 0.15
GCDH-215ENST00000591050 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
GCDH-215ENST00000591050 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
GCDH-215ENST00000591050 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
GCDH-215ENST00000591050 AQRO60306 1485 aaKnown RBP eCLIP15.85■□□□□ 0.137e-7■■■■■ 35.2
GCDH-215ENST00000591050 POLA1P09884 1462 aaPredicted RBP15.84■□□□□ 0.13
GCDH-215ENST00000591050 ARAP1Q96P48 1450 aa15.79■□□□□ 0.12
GCDH-215ENST00000591050 CYB5RLQ6IPT4 315 aa15.78■□□□□ 0.12
GCDH-215ENST00000591050 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
GCDH-215ENST00000591050 WDR97A6NE52 1622 aa15.73■□□□□ 0.11
GCDH-215ENST00000591050 FBLN2P98095 1184 aa15.73■□□□□ 0.11
GCDH-215ENST00000591050 CLASP1Q7Z460 1538 aa15.72■□□□□ 0.11
GCDH-215ENST00000591050 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.11
GCDH-215ENST00000591050 SOGA1O94964 1423 aa15.71■□□□□ 0.11
GCDH-215ENST00000591050 TDRD9Q8NDG6 1382 aaKnown RBP15.71■□□□□ 0.11
GCDH-215ENST00000591050 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.1
GCDH-215ENST00000591050 CUX1P39880 1505 aa15.7■□□□□ 0.1
GCDH-215ENST00000591050 SUPT5HO00267 1087 aaKnown RBP15.69■□□□□ 0.1
GCDH-215ENST00000591050 PBRM1Q86U86 1689 aa15.69■□□□□ 0.1
GCDH-215ENST00000591050 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
GCDH-215ENST00000591050 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
GCDH-215ENST00000591050 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
GCDH-215ENST00000591050 GRIN2BQ13224 1484 aa15.61■□□□□ 0.09
GCDH-215ENST00000591050 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
GCDH-215ENST00000591050 ABCA5Q8WWZ7 1642 aa15.58■□□□□ 0.09
GCDH-215ENST00000591050 CHMP7Q8WUX9 453 aaPredicted RBP15.58■□□□□ 0.08
GCDH-215ENST00000591050 GAPVD1Q14C86 1478 aa15.55■□□□□ 0.08
GCDH-215ENST00000591050 CHIC1Q5VXU3 224 aa15.52■□□□□ 0.08
GCDH-215ENST00000591050 ABCA10Q8WWZ4 1543 aa15.52■□□□□ 0.07
GCDH-215ENST00000591050 ERCC6L2Q5T890 1561 aa15.48■□□□□ 0.07
GCDH-215ENST00000591050 ADAMTS12P58397 1594 aa15.46■□□□□ 0.07
GCDH-215ENST00000591050 BIVM-ERCC5R4GMW8 1640 aa15.45■□□□□ 0.06
GCDH-215ENST00000591050 GRIN2AQ12879 1464 aa15.44■□□□□ 0.06
GCDH-215ENST00000591050 CEP170Q5SW79 1584 aa15.44■□□□□ 0.06
GCDH-215ENST00000591050 TOP2BQ02880 1626 aa15.41■□□□□ 0.06
GCDH-215ENST00000591050 SHROOM2Q13796 1616 aa15.41■□□□□ 0.06
GCDH-215ENST00000591050 NUP160Q12769 1436 aa15.38■□□□□ 0.05
GCDH-215ENST00000591050 WRNQ14191 1432 aaPredicted RBP eCLIP15.38■□□□□ 0.05
GCDH-215ENST00000591050 KIF13AQ9H1H9 1805 aa15.38■□□□□ 0.05
GCDH-215ENST00000591050 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.04
GCDH-215ENST00000591050 FHAD1B1AJZ9 1412 aa15.32■□□□□ 0.04
GCDH-215ENST00000591050 AEBP2Q6ZN18 517 aaPredicted RBP15.29■□□□□ 0.04
GCDH-215ENST00000591050 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms