RNA–Protein interactions for RNA: ENST00000590916.1

ATP4A-202, Transcript of ATPase H+/K+ transporting subunit alpha, humanhuman

TSL 4

Gene ATP4A, Length 449 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4A-202ENST00000590916 NISCHQ9Y2I1 1504 aa39.88■■■■□ 3.97
ATP4A-202ENST00000590916 ABCC9O60706 1549 aa36■■■■□ 3.35
ATP4A-202ENST00000590916 CCDC180Q9P1Z9 1646 aa35.64■■■■□ 3.3
ATP4A-202ENST00000590916 RB1CC1Q8TDY2 1594 aa34.06■■■■□ 3.04
ATP4A-202ENST00000590916 DNAJC5BQ9UF47 199 aa33.94■■■■□ 3.02
ATP4A-202ENST00000590916 DCAF8L2P0C7V8 631 aa33.74■■■□□ 2.99
ATP4A-202ENST00000590916 NACADO15069 1562 aa33.73■■■□□ 2.99
ATP4A-202ENST00000590916 PABPN1Q86U42 306 aaKnown RBP eCLIP33.51■■■□□ 2.95
ATP4A-202ENST00000590916 UNC13AQ9UPW8 1703 aa33.36■■■□□ 2.93
ATP4A-202ENST00000590916 ZCCHC6Q5VYS8 1495 aaKnown RBP33.31■■■□□ 2.92
ATP4A-202ENST00000590916 BICRAQ9NZM4 1560 aa33.11■■■□□ 2.89
ATP4A-202ENST00000590916 MYO15BQ96JP2 1530 aa33.11■■■□□ 2.89
ATP4A-202ENST00000590916 DCAF1Q9Y4B6 1507 aa32.98■■■□□ 2.87
ATP4A-202ENST00000590916 SCRIBQ14160 1630 aa32.62■■■□□ 2.81
ATP4A-202ENST00000590916 SHROOM4Q9ULL8 1493 aa32.48■■■□□ 2.79
ATP4A-202ENST00000590916 CC2D2AQ9P2K1 1620 aa32.45■■■□□ 2.79
ATP4A-202ENST00000590916 CECR2Q9BXF3 1484 aa32.39■■■□□ 2.78
ATP4A-202ENST00000590916 EIF4G1Q04637 1599 aaKnown RBP32.31■■■□□ 2.76
ATP4A-202ENST00000590916 DNAJC5Q9H3Z4 198 aa31.22■■■□□ 2.59
ATP4A-202ENST00000590916 NCAPD3P42695 1498 aa31.14■■■□□ 2.58
ATP4A-202ENST00000590916 ATAD2BQ9ULI0 1458 aa31.08■■■□□ 2.57
ATP4A-202ENST00000590916 ERCC6Q03468 1493 aa31.07■■■□□ 2.56
ATP4A-202ENST00000590916 SMARCA4P51532 1647 aa31.01■■■□□ 2.55
ATP4A-202ENST00000590916 CUX2O14529 1486 aa30.97■■■□□ 2.55
ATP4A-202ENST00000590916 SMARCA2P51531 1590 aa30.95■■■□□ 2.54
ATP4A-202ENST00000590916 HMGXB3Q12766 1538 aa30.9■■■□□ 2.54
ATP4A-202ENST00000590916 BAZ1AQ9NRL2 1556 aaPredicted RBP30.88■■■□□ 2.53
ATP4A-202ENST00000590916 NESP48681 1621 aa30.87■■■□□ 2.53
ATP4A-202ENST00000590916 BAZ1BQ9UIG0 1483 aaKnown RBP30.79■■■□□ 2.52
ATP4A-202ENST00000590916 MROH2BQ7Z745 1585 aa30.76■■■□□ 2.52
ATP4A-202ENST00000590916 PEG3Q9GZU2 1588 aa30.62■■■□□ 2.49
ATP4A-202ENST00000590916 RSF1Q96T23 1441 aaPredicted RBP30.55■■■□□ 2.48
ATP4A-202ENST00000590916 THOC2Q8NI27 1593 aaKnown RBP30.53■■■□□ 2.48
ATP4A-202ENST00000590916 LAMC3Q9Y6N6 1575 aa30.49■■■□□ 2.47
ATP4A-202ENST00000590916 WIZO95785 1651 aa30.49■■■□□ 2.47
ATP4A-202ENST00000590916 KIF21AQ7Z4S6 1674 aa30.45■■■□□ 2.46
ATP4A-202ENST00000590916 PDS5BQ9NTI5 1447 aa30.33■■■□□ 2.45
ATP4A-202ENST00000590916 CADPSQ9ULU8 1353 aa30.22■■■□□ 2.43
ATP4A-202ENST00000590916 SUPT5HO00267 1087 aaKnown RBP30.16■■■□□ 2.42
ATP4A-202ENST00000590916 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
ATP4A-202ENST00000590916 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
ATP4A-202ENST00000590916 WDR62O43379 1518 aa30.03■■■□□ 2.4
ATP4A-202ENST00000590916 CEP164Q9UPV0 1460 aa29.97■■■□□ 2.39
ATP4A-202ENST00000590916 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
ATP4A-202ENST00000590916 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
ATP4A-202ENST00000590916 CFTRP13569 1480 aa29.83■■■□□ 2.37
ATP4A-202ENST00000590916 CCDC88BA6NC98 1476 aa29.79■■■□□ 2.36
ATP4A-202ENST00000590916 URB2Q14146 1524 aaKnown RBP29.71■■■□□ 2.35
ATP4A-202ENST00000590916 OSCARQ8IYS5 282 aa29.56■■■□□ 2.32
ATP4A-202ENST00000590916 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
ATP4A-202ENST00000590916 ZNF608Q9ULD9 1512 aaPredicted RBP29.41■■■□□ 2.3
ATP4A-202ENST00000590916 IFT140Q96RY7 1462 aa29.35■■■□□ 2.29
ATP4A-202ENST00000590916 TOPBP1Q92547 1522 aa29.34■■■□□ 2.29
ATP4A-202ENST00000590916 RIMBP3CA6NJZ7 1639 aa29.26■■■□□ 2.27
ATP4A-202ENST00000590916 RIMBP3BA6NNM3 1639 aa29.26■■■□□ 2.27
ATP4A-202ENST00000590916 RIMBP3Q9UFD9 1639 aa29.26■■■□□ 2.27
ATP4A-202ENST00000590916 EIF4G3O43432 1585 aaKnown RBP29.21■■■□□ 2.27
ATP4A-202ENST00000590916 DNMBPQ6XZF7 1577 aa29.19■■■□□ 2.26
ATP4A-202ENST00000590916 ABCC8Q09428 1581 aa29.15■■■□□ 2.26
ATP4A-202ENST00000590916 ARHGEF11O15085 1522 aa29.12■■■□□ 2.25
ATP4A-202ENST00000590916 AQRO60306 1485 aaKnown RBP eCLIP29.11■■■□□ 2.25
ATP4A-202ENST00000590916 TARBP1Q13395 1621 aaKnown RBP29.08■■■□□ 2.25
ATP4A-202ENST00000590916 CHD1O14646 1710 aa29.06■■■□□ 2.24
ATP4A-202ENST00000590916 POLA1P09884 1462 aaPredicted RBP29.03■■■□□ 2.24
ATP4A-202ENST00000590916 FBLN2P98095 1184 aa29.01■■■□□ 2.23
ATP4A-202ENST00000590916 RAD54L2Q9Y4B4 1467 aa28.98■■■□□ 2.23
ATP4A-202ENST00000590916 CYB5RLQ6IPT4 315 aa28.97■■■□□ 2.23
ATP4A-202ENST00000590916 TDRD9Q8NDG6 1382 aaKnown RBP28.91■■■□□ 2.22
ATP4A-202ENST00000590916 SOGA1O94964 1423 aa28.89■■■□□ 2.22
ATP4A-202ENST00000590916 ARAP1Q96P48 1450 aa28.85■■■□□ 2.21
ATP4A-202ENST00000590916 FGD5Q6ZNL6 1462 aa28.84■■■□□ 2.21
ATP4A-202ENST00000590916 CUX1P39880 1505 aa28.84■■■□□ 2.21
ATP4A-202ENST00000590916 SNAPC4Q5SXM2 1469 aa28.8■■■□□ 2.2
ATP4A-202ENST00000590916 WRNQ14191 1432 aaPredicted RBP eCLIP28.8■■■□□ 2.2
ATP4A-202ENST00000590916 TRHP20396 242 aaPredicted RBP28.75■■■□□ 2.19
ATP4A-202ENST00000590916 SYNJ1O43426 1573 aa28.74■■■□□ 2.19
ATP4A-202ENST00000590916 TOP2BQ02880 1626 aa28.71■■■□□ 2.19
ATP4A-202ENST00000590916 BIVM-ERCC5R4GMW8 1640 aa28.71■■■□□ 2.19
ATP4A-202ENST00000590916 CHMP7Q8WUX9 453 aaPredicted RBP28.69■■■□□ 2.18
ATP4A-202ENST00000590916 WDR97A6NE52 1622 aa28.65■■■□□ 2.18
ATP4A-202ENST00000590916 CLASP1Q7Z460 1538 aa28.65■■■□□ 2.18
ATP4A-202ENST00000590916 GRIN2BQ13224 1484 aa28.64■■■□□ 2.17
ATP4A-202ENST00000590916 MAGI1Q96QZ7 1491 aaPredicted RBP28.63■■■□□ 2.17
ATP4A-202ENST00000590916 PBRM1Q86U86 1689 aa28.57■■■□□ 2.16
ATP4A-202ENST00000590916 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
ATP4A-202ENST00000590916 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
ATP4A-202ENST00000590916 ABCA5Q8WWZ7 1642 aa28.44■■■□□ 2.14
ATP4A-202ENST00000590916 ABCA10Q8WWZ4 1543 aa28.43■■■□□ 2.14
ATP4A-202ENST00000590916 CHIC1Q5VXU3 224 aa28.38■■■□□ 2.13
ATP4A-202ENST00000590916 ERCC6L2Q5T890 1561 aa28.29■■■□□ 2.12
ATP4A-202ENST00000590916 GRIN2AQ12879 1464 aa28.27■■■□□ 2.12
ATP4A-202ENST00000590916 ADAMTS12P58397 1594 aa28.26■■■□□ 2.11
ATP4A-202ENST00000590916 CEP170Q5SW79 1584 aa28.23■■■□□ 2.11
ATP4A-202ENST00000590916 KIF27Q86VH2 1401 aa28.17■■■□□ 2.1
ATP4A-202ENST00000590916 NUP160Q12769 1436 aa28.16■■■□□ 2.1
ATP4A-202ENST00000590916 FHAD1B1AJZ9 1412 aa28.13■■■□□ 2.09
ATP4A-202ENST00000590916 RUSC2Q8N2Y8 1516 aa28.07■■■□□ 2.08
ATP4A-202ENST00000590916 SHROOM2Q13796 1616 aa28.07■■■□□ 2.08
ATP4A-202ENST00000590916 ERICH3Q5RHP9 1530 aa28.06■■■□□ 2.08
ATP4A-202ENST00000590916 AEBP2Q6ZN18 517 aaPredicted RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms