RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 NISCHQ9Y2I1 1504 aa22.9■■□□□ 1.26
AP3D1-208ENST00000590683 ABCC9O60706 1549 aa21.84■■□□□ 1.09
AP3D1-208ENST00000590683 DNAJC5BQ9UF47 199 aa21.29■■□□□ 1
AP3D1-208ENST00000590683 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
AP3D1-208ENST00000590683 RB1CC1Q8TDY2 1594 aa20.35■□□□□ 0.85
AP3D1-208ENST00000590683 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
AP3D1-208ENST00000590683 DNAJC5Q9H3Z4 198 aa20.12■□□□□ 0.81
AP3D1-208ENST00000590683 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
AP3D1-208ENST00000590683 NACADO15069 1562 aa19.98■□□□□ 0.79
AP3D1-208ENST00000590683 BICRAQ9NZM4 1560 aa19.86■□□□□ 0.77
AP3D1-208ENST00000590683 CECR2Q9BXF3 1484 aa19.73■□□□□ 0.75
AP3D1-208ENST00000590683 DCAF8L2P0C7V8 631 aa19.72■□□□□ 0.75
AP3D1-208ENST00000590683 CC2D2AQ9P2K1 1620 aa19.69■□□□□ 0.74
AP3D1-208ENST00000590683 EIF4G1Q04637 1599 aaKnown RBP19.41■□□□□ 0.7
AP3D1-208ENST00000590683 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
AP3D1-208ENST00000590683 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
AP3D1-208ENST00000590683 CUX2O14529 1486 aa19.11■□□□□ 0.65
AP3D1-208ENST00000590683 SCRIBQ14160 1630 aa19.09■□□□□ 0.65
AP3D1-208ENST00000590683 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
AP3D1-208ENST00000590683 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
AP3D1-208ENST00000590683 DCAF1Q9Y4B6 1507 aa18.8■□□□□ 0.6
AP3D1-208ENST00000590683 ZCCHC6Q5VYS8 1495 aaKnown RBP18.78■□□□□ 0.6
AP3D1-208ENST00000590683 NESP48681 1621 aa18.53■□□□□ 0.56
AP3D1-208ENST00000590683 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.56
AP3D1-208ENST00000590683 NCAPD3P42695 1498 aa18.44■□□□□ 0.54
AP3D1-208ENST00000590683 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
AP3D1-208ENST00000590683 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
AP3D1-208ENST00000590683 ATAD2BQ9ULI0 1458 aa18.28■□□□□ 0.52
AP3D1-208ENST00000590683 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
AP3D1-208ENST00000590683 BAZ1AQ9NRL2 1556 aaPredicted RBP18.21■□□□□ 0.51
AP3D1-208ENST00000590683 LAMC3Q9Y6N6 1575 aa18.19■□□□□ 0.5
AP3D1-208ENST00000590683 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
AP3D1-208ENST00000590683 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
AP3D1-208ENST00000590683 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
AP3D1-208ENST00000590683 BAZ1BQ9UIG0 1483 aaKnown RBP18.06■□□□□ 0.48
AP3D1-208ENST00000590683 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
AP3D1-208ENST00000590683 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
AP3D1-208ENST00000590683 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
AP3D1-208ENST00000590683 WDR62O43379 1518 aa18.02■□□□□ 0.47
AP3D1-208ENST00000590683 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
AP3D1-208ENST00000590683 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
AP3D1-208ENST00000590683 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
AP3D1-208ENST00000590683 ARHGEF11O15085 1522 aa17.86■□□□□ 0.45
AP3D1-208ENST00000590683 TRHP20396 242 aaPredicted RBP17.84■□□□□ 0.45
AP3D1-208ENST00000590683 CADPSQ9ULU8 1353 aa17.83■□□□□ 0.45
AP3D1-208ENST00000590683 CEP164Q9UPV0 1460 aa17.76■□□□□ 0.43
AP3D1-208ENST00000590683 CYB5RLQ6IPT4 315 aa17.76■□□□□ 0.43
AP3D1-208ENST00000590683 MROH2BQ7Z745 1585 aa17.67■□□□□ 0.42
AP3D1-208ENST00000590683 FANCD2Q9BXW9 1451 aa17.67■□□□□ 0.42
AP3D1-208ENST00000590683 ARAP1Q96P48 1450 aa17.63■□□□□ 0.41
AP3D1-208ENST00000590683 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
AP3D1-208ENST00000590683 ZNF608Q9ULD9 1512 aaPredicted RBP17.56■□□□□ 0.4
AP3D1-208ENST00000590683 CHD1O14646 1710 aa17.52■□□□□ 0.39
AP3D1-208ENST00000590683 WIZO95785 1651 aa17.47■□□□□ 0.39
AP3D1-208ENST00000590683 CFTRP13569 1480 aa17.46■□□□□ 0.39
AP3D1-208ENST00000590683 EIF4G3O43432 1585 aaKnown RBP17.42■□□□□ 0.38
AP3D1-208ENST00000590683 IFT140Q96RY7 1462 aa17.42■□□□□ 0.38
AP3D1-208ENST00000590683 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.38
AP3D1-208ENST00000590683 ILDR1Q86SU0 546 aaPredicted RBP17.39■□□□□ 0.37
AP3D1-208ENST00000590683 PRDM2Q13029 1718 aa17.33■□□□□ 0.37
AP3D1-208ENST00000590683 FBLN2P98095 1184 aa17.3■□□□□ 0.36
AP3D1-208ENST00000590683 AQRO60306 1485 aaKnown RBP eCLIP17.26■□□□□ 0.353e-7■■■■■ 53.7
AP3D1-208ENST00000590683 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
AP3D1-208ENST00000590683 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.35
AP3D1-208ENST00000590683 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
AP3D1-208ENST00000590683 TOP2AP11388 1531 aaKnown RBP17.11■□□□□ 0.33
AP3D1-208ENST00000590683 DNMBPQ6XZF7 1577 aa17.11■□□□□ 0.33
AP3D1-208ENST00000590683 SYNJ1O43426 1573 aa17.09■□□□□ 0.33
AP3D1-208ENST00000590683 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
AP3D1-208ENST00000590683 GAPVD1Q14C86 1478 aa17.07■□□□□ 0.32
AP3D1-208ENST00000590683 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
AP3D1-208ENST00000590683 KIF13AQ9H1H9 1805 aa17.05■□□□□ 0.32
AP3D1-208ENST00000590683 CHIC1Q5VXU3 224 aa17.03■□□□□ 0.32
AP3D1-208ENST00000590683 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
AP3D1-208ENST00000590683 TDRD9Q8NDG6 1382 aaKnown RBP17.01■□□□□ 0.31
AP3D1-208ENST00000590683 RAD54L2Q9Y4B4 1467 aa16.99■□□□□ 0.31
AP3D1-208ENST00000590683 KDM4FA0A1W2PPD8 638 aa16.99■□□□□ 0.31
AP3D1-208ENST00000590683 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
AP3D1-208ENST00000590683 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
AP3D1-208ENST00000590683 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
AP3D1-208ENST00000590683 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
AP3D1-208ENST00000590683 SYNJ2O15056 1496 aa16.9■□□□□ 0.3
AP3D1-208ENST00000590683 SOGA1O94964 1423 aa16.89■□□□□ 0.29
AP3D1-208ENST00000590683 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
AP3D1-208ENST00000590683 GRIN2BQ13224 1484 aa16.84■□□□□ 0.29
AP3D1-208ENST00000590683 PBRM1Q86U86 1689 aa16.83■□□□□ 0.28
AP3D1-208ENST00000590683 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
AP3D1-208ENST00000590683 KDM6BO15054 1643 aa16.78■□□□□ 0.28
AP3D1-208ENST00000590683 CEP170Q5SW79 1584 aa16.77■□□□□ 0.28
AP3D1-208ENST00000590683 HECW2Q9P2P5 1572 aa16.74■□□□□ 0.27
AP3D1-208ENST00000590683 FAM69CQ0P6D2 419 aa16.73■□□□□ 0.27
AP3D1-208ENST00000590683 TSPOAP1O95153 1857 aa16.72■□□□□ 0.27
AP3D1-208ENST00000590683 ABCC10Q5T3U5 1492 aa16.71■□□□□ 0.27
AP3D1-208ENST00000590683 DIP2BQ9P265 1576 aa16.69■□□□□ 0.26
AP3D1-208ENST00000590683 SHROOM2Q13796 1616 aa16.69■□□□□ 0.26
AP3D1-208ENST00000590683 CUX1P39880 1505 aa16.65■□□□□ 0.26
AP3D1-208ENST00000590683 ADGRL1O94910 1474 aa16.65■□□□□ 0.26
AP3D1-208ENST00000590683 GRIN2AQ12879 1464 aa16.65■□□□□ 0.26
AP3D1-208ENST00000590683 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
AP3D1-208ENST00000590683 NUP160Q12769 1436 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms