RNA–Protein interactions for RNA: ENST00000590386.5

HKR1-216, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 5

Gene HKR1, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-216ENST00000590386 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
HKR1-216ENST00000590386 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
HKR1-216ENST00000590386 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
HKR1-216ENST00000590386 ABCC9O60706 1549 aa21.28■■□□□ 1
HKR1-216ENST00000590386 CCDC180Q9P1Z9 1646 aa21.14■□□□□ 0.97
HKR1-216ENST00000590386 DCAF8L2P0C7V8 631 aa20.2■□□□□ 0.82
HKR1-216ENST00000590386 RB1CC1Q8TDY2 1594 aa20.11■□□□□ 0.81
HKR1-216ENST00000590386 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
HKR1-216ENST00000590386 NACADO15069 1562 aa19.95■□□□□ 0.78
HKR1-216ENST00000590386 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.78
HKR1-216ENST00000590386 UNC13AQ9UPW8 1703 aa19.87■□□□□ 0.77
HKR1-216ENST00000590386 BICRAQ9NZM4 1560 aa19.63■□□□□ 0.73
HKR1-216ENST00000590386 ZCCHC6Q5VYS8 1495 aaKnown RBP19.61■□□□□ 0.73
HKR1-216ENST00000590386 MYO15BQ96JP2 1530 aa19.59■□□□□ 0.73
HKR1-216ENST00000590386 SENP3Q9H4L4 574 aaPredicted RBP19.55■□□□□ 0.72
HKR1-216ENST00000590386 SCRIBQ14160 1630 aa19.46■□□□□ 0.71
HKR1-216ENST00000590386 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
HKR1-216ENST00000590386 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
HKR1-216ENST00000590386 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
HKR1-216ENST00000590386 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
HKR1-216ENST00000590386 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
HKR1-216ENST00000590386 SHROOM4Q9ULL8 1493 aa19.06■□□□□ 0.64
HKR1-216ENST00000590386 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
HKR1-216ENST00000590386 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.55
HKR1-216ENST00000590386 NCAPD3P42695 1498 aa18.44■□□□□ 0.54
HKR1-216ENST00000590386 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
HKR1-216ENST00000590386 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
HKR1-216ENST00000590386 NESP48681 1621 aa18.33■□□□□ 0.52
HKR1-216ENST00000590386 FOXD1Q16676 465 aa18.32■□□□□ 0.52
HKR1-216ENST00000590386 BAZ1AQ9NRL2 1556 aaPredicted RBP18.32■□□□□ 0.52
HKR1-216ENST00000590386 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
HKR1-216ENST00000590386 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
HKR1-216ENST00000590386 ERCC6Q03468 1493 aa18.27■□□□□ 0.52
HKR1-216ENST00000590386 PEG3Q9GZU2 1588 aa18.19■□□□□ 0.5
HKR1-216ENST00000590386 WIZO95785 1651 aa18.18■□□□□ 0.5
HKR1-216ENST00000590386 DNAJC5Q9H3Z4 198 aa18.13■□□□□ 0.49
HKR1-216ENST00000590386 CUX2O14529 1486 aa18.09■□□□□ 0.49
HKR1-216ENST00000590386 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
HKR1-216ENST00000590386 THOC2Q8NI27 1593 aaKnown RBP18.01■□□□□ 0.47
HKR1-216ENST00000590386 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
HKR1-216ENST00000590386 RSF1Q96T23 1441 aaPredicted RBP17.94■□□□□ 0.46
HKR1-216ENST00000590386 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
HKR1-216ENST00000590386 PDS5BQ9NTI5 1447 aa17.9■□□□□ 0.46
HKR1-216ENST00000590386 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
HKR1-216ENST00000590386 MRC2Q9UBG0 1479 aa17.79■□□□□ 0.44
HKR1-216ENST00000590386 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
HKR1-216ENST00000590386 CEP164Q9UPV0 1460 aa17.74■□□□□ 0.43
HKR1-216ENST00000590386 WDR62O43379 1518 aa17.72■□□□□ 0.43
HKR1-216ENST00000590386 CFTRP13569 1480 aa17.72■□□□□ 0.43
HKR1-216ENST00000590386 CCDC88BA6NC98 1476 aa17.69■□□□□ 0.42
HKR1-216ENST00000590386 URB2Q14146 1524 aaKnown RBP17.65■□□□□ 0.42
HKR1-216ENST00000590386 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
HKR1-216ENST00000590386 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
HKR1-216ENST00000590386 TRIM41Q8WV44 630 aa17.52■□□□□ 0.4
HKR1-216ENST00000590386 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
HKR1-216ENST00000590386 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
HKR1-216ENST00000590386 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
HKR1-216ENST00000590386 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
HKR1-216ENST00000590386 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
HKR1-216ENST00000590386 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
HKR1-216ENST00000590386 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.36
HKR1-216ENST00000590386 EIF4G3O43432 1585 aaKnown RBP17.3■□□□□ 0.36
HKR1-216ENST00000590386 RAD54L2Q9Y4B4 1467 aa17.3■□□□□ 0.36
HKR1-216ENST00000590386 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
HKR1-216ENST00000590386 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
HKR1-216ENST00000590386 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
HKR1-216ENST00000590386 CHD1O14646 1710 aa17.24■□□□□ 0.35
HKR1-216ENST00000590386 MSH5O43196 834 aa17.24■□□□□ 0.35
HKR1-216ENST00000590386 FBLN2P98095 1184 aa17.24■□□□□ 0.35
HKR1-216ENST00000590386 TDRD9Q8NDG6 1382 aaKnown RBP17.22■□□□□ 0.35
HKR1-216ENST00000590386 RIMBP3CA6NJZ7 1639 aa17.21■□□□□ 0.35
HKR1-216ENST00000590386 RIMBP3BA6NNM3 1639 aa17.21■□□□□ 0.35
HKR1-216ENST00000590386 RIMBP3Q9UFD9 1639 aa17.21■□□□□ 0.35
HKR1-216ENST00000590386 CUX1P39880 1505 aa17.21■□□□□ 0.34
HKR1-216ENST00000590386 SOGA1O94964 1423 aa17.2■□□□□ 0.34
HKR1-216ENST00000590386 FGD5Q6ZNL6 1462 aa17.19■□□□□ 0.34
HKR1-216ENST00000590386 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
HKR1-216ENST00000590386 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
HKR1-216ENST00000590386 SNAPC4Q5SXM2 1469 aa17.08■□□□□ 0.32
HKR1-216ENST00000590386 WDR97A6NE52 1622 aa17.04■□□□□ 0.32
HKR1-216ENST00000590386 PIAS4Q8N2W9 510 aaPredicted RBP17.03■□□□□ 0.32
HKR1-216ENST00000590386 PBRM1Q86U86 1689 aa17.02■□□□□ 0.32
HKR1-216ENST00000590386 CHMP7Q8WUX9 453 aaPredicted RBP17.02■□□□□ 0.32
HKR1-216ENST00000590386 GRIN2BQ13224 1484 aa16.98■□□□□ 0.31
HKR1-216ENST00000590386 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
HKR1-216ENST00000590386 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
HKR1-216ENST00000590386 SYNJ1O43426 1573 aa16.96■□□□□ 0.31
HKR1-216ENST00000590386 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
HKR1-216ENST00000590386 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
HKR1-216ENST00000590386 CLASP1Q7Z460 1538 aa16.92■□□□□ 0.3
HKR1-216ENST00000590386 ABCA10Q8WWZ4 1543 aa16.92■□□□□ 0.3
HKR1-216ENST00000590386 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
HKR1-216ENST00000590386 BIVM-ERCC5R4GMW8 1640 aa16.89■□□□□ 0.29
HKR1-216ENST00000590386 WRNQ14191 1432 aaPredicted RBP eCLIP16.89■□□□□ 0.29
HKR1-216ENST00000590386 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
HKR1-216ENST00000590386 TRHP20396 242 aaPredicted RBP16.88■□□□□ 0.29
HKR1-216ENST00000590386 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
HKR1-216ENST00000590386 ERCC6L2Q5T890 1561 aa16.83■□□□□ 0.28
HKR1-216ENST00000590386 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
HKR1-216ENST00000590386 ADAMTS12P58397 1594 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms