RNA–Protein interactions for RNA: ENST00000590093.1

PPL-204, Transcript of periplakin, humanhuman

TSL 2

Gene PPL, Length 652 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPL-204ENST00000590093 NISCHQ9Y2I1 1504 aa29.34■■■□□ 2.29
PPL-204ENST00000590093 ABCC9O60706 1549 aa26.53■■□□□ 1.84
PPL-204ENST00000590093 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
PPL-204ENST00000590093 RB1CC1Q8TDY2 1594 aa25.15■■□□□ 1.62
PPL-204ENST00000590093 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
PPL-204ENST00000590093 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
PPL-204ENST00000590093 NACADO15069 1562 aa24.93■■□□□ 1.58
PPL-204ENST00000590093 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
PPL-204ENST00000590093 MYO15BQ96JP2 1530 aa24.51■■□□□ 1.51
PPL-204ENST00000590093 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.51
PPL-204ENST00000590093 UNC13AQ9UPW8 1703 aa24.45■■□□□ 1.5
PPL-204ENST00000590093 BICRAQ9NZM4 1560 aa24.36■■□□□ 1.49
PPL-204ENST00000590093 DCAF1Q9Y4B6 1507 aa24.22■■□□□ 1.47
PPL-204ENST00000590093 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
PPL-204ENST00000590093 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
PPL-204ENST00000590093 CECR2Q9BXF3 1484 aa23.9■■□□□ 1.42
PPL-204ENST00000590093 CC2D2AQ9P2K1 1620 aa23.89■■□□□ 1.42
PPL-204ENST00000590093 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
PPL-204ENST00000590093 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
PPL-204ENST00000590093 DNAJC5Q9H3Z4 198 aa23.02■■□□□ 1.28
PPL-204ENST00000590093 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
PPL-204ENST00000590093 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
PPL-204ENST00000590093 SMARCA2P51531 1590 aa22.89■■□□□ 1.25
PPL-204ENST00000590093 SMARCA4P51532 1647 aa22.88■■□□□ 1.25
PPL-204ENST00000590093 CUX2O14529 1486 aa22.85■■□□□ 1.25
PPL-204ENST00000590093 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
PPL-204ENST00000590093 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
PPL-204ENST00000590093 BAZ1BQ9UIG0 1483 aaKnown RBP22.77■■□□□ 1.24
PPL-204ENST00000590093 NESP48681 1621 aa22.73■■□□□ 1.23
PPL-204ENST00000590093 PEG3Q9GZU2 1588 aa22.62■■□□□ 1.21
PPL-204ENST00000590093 MROH2BQ7Z745 1585 aa22.61■■□□□ 1.21
PPL-204ENST00000590093 LAMC3Q9Y6N6 1575 aa22.52■■□□□ 1.2
PPL-204ENST00000590093 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
PPL-204ENST00000590093 THOC2Q8NI27 1593 aaKnown RBP22.44■■□□□ 1.18
PPL-204ENST00000590093 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
PPL-204ENST00000590093 WIZO95785 1651 aa22.38■■□□□ 1.17
PPL-204ENST00000590093 RSF1Q96T23 1441 aaPredicted RBP22.38■■□□□ 1.17
PPL-204ENST00000590093 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
PPL-204ENST00000590093 MRC2Q9UBG0 1479 aa22.24■■□□□ 1.15
PPL-204ENST00000590093 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
PPL-204ENST00000590093 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
PPL-204ENST00000590093 WDR62O43379 1518 aa22.14■■□□□ 1.13
PPL-204ENST00000590093 FANCD2Q9BXW9 1451 aa22.12■■□□□ 1.13
PPL-204ENST00000590093 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
PPL-204ENST00000590093 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
PPL-204ENST00000590093 CFTRP13569 1480 aa22.07■■□□□ 1.12
PPL-204ENST00000590093 OSCARQ8IYS5 282 aa21.91■■□□□ 1.1
PPL-204ENST00000590093 URB2Q14146 1524 aaKnown RBP21.9■■□□□ 1.1
PPL-204ENST00000590093 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.08
PPL-204ENST00000590093 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
PPL-204ENST00000590093 IFT140Q96RY7 1462 aa21.7■■□□□ 1.06
PPL-204ENST00000590093 ZNF608Q9ULD9 1512 aaPredicted RBP21.67■■□□□ 1.06
PPL-204ENST00000590093 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
PPL-204ENST00000590093 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
PPL-204ENST00000590093 DNMBPQ6XZF7 1577 aa21.56■■□□□ 1.04
PPL-204ENST00000590093 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
PPL-204ENST00000590093 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.03
PPL-204ENST00000590093 FBLN2P98095 1184 aa21.5■■□□□ 1.03
PPL-204ENST00000590093 RIMBP3CA6NJZ7 1639 aa21.5■■□□□ 1.03
PPL-204ENST00000590093 RIMBP3BA6NNM3 1639 aa21.5■■□□□ 1.03
PPL-204ENST00000590093 RIMBP3Q9UFD9 1639 aa21.5■■□□□ 1.03
PPL-204ENST00000590093 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
PPL-204ENST00000590093 POLA1P09884 1462 aaPredicted RBP21.44■■□□□ 1.02
PPL-204ENST00000590093 CYB5RLQ6IPT4 315 aa21.43■■□□□ 1.02
PPL-204ENST00000590093 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
PPL-204ENST00000590093 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
PPL-204ENST00000590093 SOGA1O94964 1423 aa21.4■■□□□ 1.02
PPL-204ENST00000590093 TDRD9Q8NDG6 1382 aaKnown RBP21.39■■□□□ 1.02
PPL-204ENST00000590093 CHD1O14646 1710 aa21.33■■□□□ 1.01
PPL-204ENST00000590093 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
PPL-204ENST00000590093 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
PPL-204ENST00000590093 TRHP20396 242 aaPredicted RBP21.27■■□□□ 1
PPL-204ENST00000590093 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
PPL-204ENST00000590093 CUX1P39880 1505 aa21.24■□□□□ 0.99
PPL-204ENST00000590093 ARAP1Q96P48 1450 aa21.23■□□□□ 0.99
PPL-204ENST00000590093 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
PPL-204ENST00000590093 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
PPL-204ENST00000590093 MAGI1Q96QZ7 1491 aaPredicted RBP21.18■□□□□ 0.98
PPL-204ENST00000590093 WRNQ14191 1432 aaPredicted RBP eCLIP21.13■□□□□ 0.97
PPL-204ENST00000590093 BIVM-ERCC5R4GMW8 1640 aa21.13■□□□□ 0.97
PPL-204ENST00000590093 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
PPL-204ENST00000590093 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
PPL-204ENST00000590093 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
PPL-204ENST00000590093 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
PPL-204ENST00000590093 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
PPL-204ENST00000590093 ABCA10Q8WWZ4 1543 aa21.03■□□□□ 0.96
PPL-204ENST00000590093 PBRM1Q86U86 1689 aa21.01■□□□□ 0.95
PPL-204ENST00000590093 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
PPL-204ENST00000590093 GRIN2AQ12879 1464 aa20.9■□□□□ 0.94
PPL-204ENST00000590093 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
PPL-204ENST00000590093 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
PPL-204ENST00000590093 ADAMTS12P58397 1594 aa20.83■□□□□ 0.92
PPL-204ENST00000590093 NUP160Q12769 1436 aa20.81■□□□□ 0.92
PPL-204ENST00000590093 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
PPL-204ENST00000590093 ERCC6L2Q5T890 1561 aa20.8■□□□□ 0.92
PPL-204ENST00000590093 ERICH3Q5RHP9 1530 aa20.76■□□□□ 0.91
PPL-204ENST00000590093 AEBP2Q6ZN18 517 aaPredicted RBP20.73■□□□□ 0.91
PPL-204ENST00000590093 JPH4Q96JJ6 628 aa20.7■□□□□ 0.9
PPL-204ENST00000590093 PRG4Q92954 1404 aaPredicted RBP20.7■□□□□ 0.9
PPL-204ENST00000590093 SHROOM2Q13796 1616 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms