RNA–Protein interactions for RNA: ENST00000589890.1

CDIP1-214, Transcript of cell death inducing p53 target 1, humanhuman

TSL 5

Gene CDIP1, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-214ENST00000589890 NISCHQ9Y2I1 1504 aa27.53■■■□□ 2
CDIP1-214ENST00000589890 CCDC180Q9P1Z9 1646 aa24.5■■□□□ 1.51
CDIP1-214ENST00000589890 ABCC9O60706 1549 aa23.87■■□□□ 1.41
CDIP1-214ENST00000589890 RB1CC1Q8TDY2 1594 aa23■■□□□ 1.27
CDIP1-214ENST00000589890 NACADO15069 1562 aa22.98■■□□□ 1.27
CDIP1-214ENST00000589890 ZCCHC6Q5VYS8 1495 aaKnown RBP22.97■■□□□ 1.27
CDIP1-214ENST00000589890 DCAF8L2P0C7V8 631 aa22.88■■□□□ 1.25
CDIP1-214ENST00000589890 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
CDIP1-214ENST00000589890 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
CDIP1-214ENST00000589890 UNC13AQ9UPW8 1703 aa22.55■■□□□ 1.2
CDIP1-214ENST00000589890 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
CDIP1-214ENST00000589890 BICRAQ9NZM4 1560 aa22.33■■□□□ 1.17
CDIP1-214ENST00000589890 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
CDIP1-214ENST00000589890 SHROOM4Q9ULL8 1493 aa22.07■■□□□ 1.12
CDIP1-214ENST00000589890 DNAJC5BQ9UF47 199 aa21.83■■□□□ 1.09
CDIP1-214ENST00000589890 EIF4G1Q04637 1599 aaKnown RBP21.73■■□□□ 1.07
CDIP1-214ENST00000589890 CC2D2AQ9P2K1 1620 aa21.62■■□□□ 1.05
CDIP1-214ENST00000589890 CECR2Q9BXF3 1484 aa21.45■■□□□ 1.02
CDIP1-214ENST00000589890 SMARCA4P51532 1647 aa21.38■■□□□ 1.01
CDIP1-214ENST00000589890 BAZ1AQ9NRL2 1556 aaPredicted RBP21.34■■□□□ 1.01
CDIP1-214ENST00000589890 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
CDIP1-214ENST00000589890 ATAD2BQ9ULI0 1458 aa21.21■□□□□ 0.99
CDIP1-214ENST00000589890 SMARCA2P51531 1590 aa21.2■□□□□ 0.98
CDIP1-214ENST00000589890 NCAPD3P42695 1498 aa21.19■□□□□ 0.98
CDIP1-214ENST00000589890 PEG3Q9GZU2 1588 aa21.17■□□□□ 0.98
CDIP1-214ENST00000589890 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
CDIP1-214ENST00000589890 BAZ1BQ9UIG0 1483 aaKnown RBP21.04■□□□□ 0.96
CDIP1-214ENST00000589890 WIZO95785 1651 aa21.02■□□□□ 0.96
CDIP1-214ENST00000589890 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
CDIP1-214ENST00000589890 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
CDIP1-214ENST00000589890 NESP48681 1621 aa20.68■□□□□ 0.9
CDIP1-214ENST00000589890 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
CDIP1-214ENST00000589890 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
CDIP1-214ENST00000589890 CADPSQ9ULU8 1353 aa20.55■□□□□ 0.88
CDIP1-214ENST00000589890 CCDC88BA6NC98 1476 aa20.51■□□□□ 0.87
CDIP1-214ENST00000589890 KIF21AQ7Z4S6 1674 aa20.49■□□□□ 0.87
CDIP1-214ENST00000589890 CFTRP13569 1480 aa20.47■□□□□ 0.87
CDIP1-214ENST00000589890 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.86
CDIP1-214ENST00000589890 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
CDIP1-214ENST00000589890 THOC2Q8NI27 1593 aaKnown RBP20.41■□□□□ 0.86
CDIP1-214ENST00000589890 PRDM2Q13029 1718 aa20.4■□□□□ 0.86
CDIP1-214ENST00000589890 FANCD2Q9BXW9 1451 aa20.34■□□□□ 0.85
CDIP1-214ENST00000589890 CUX2O14529 1486 aa20.33■□□□□ 0.85
CDIP1-214ENST00000589890 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
CDIP1-214ENST00000589890 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
CDIP1-214ENST00000589890 WDR62O43379 1518 aa20.24■□□□□ 0.83
CDIP1-214ENST00000589890 URB2Q14146 1524 aaKnown RBP20.16■□□□□ 0.82
CDIP1-214ENST00000589890 TOPBP1Q92547 1522 aa20.03■□□□□ 0.8
CDIP1-214ENST00000589890 DNMBPQ6XZF7 1577 aa20.03■□□□□ 0.8
CDIP1-214ENST00000589890 ABCC8Q09428 1581 aa20■□□□□ 0.79
CDIP1-214ENST00000589890 CUX1P39880 1505 aa19.92■□□□□ 0.78
CDIP1-214ENST00000589890 POLA1P09884 1462 aaPredicted RBP19.87■□□□□ 0.77
CDIP1-214ENST00000589890 IFT140Q96RY7 1462 aa19.87■□□□□ 0.77
CDIP1-214ENST00000589890 TARBP1Q13395 1621 aaKnown RBP19.84■□□□□ 0.77
CDIP1-214ENST00000589890 FGD5Q6ZNL6 1462 aa19.83■□□□□ 0.76
CDIP1-214ENST00000589890 ZNF608Q9ULD9 1512 aaPredicted RBP19.81■□□□□ 0.76
CDIP1-214ENST00000589890 BIVM-ERCC5R4GMW8 1640 aa19.78■□□□□ 0.76
CDIP1-214ENST00000589890 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
CDIP1-214ENST00000589890 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.76
CDIP1-214ENST00000589890 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
CDIP1-214ENST00000589890 EIF4G3O43432 1585 aaKnown RBP19.77■□□□□ 0.76
CDIP1-214ENST00000589890 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
CDIP1-214ENST00000589890 SOGA1O94964 1423 aa19.75■□□□□ 0.75
CDIP1-214ENST00000589890 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
CDIP1-214ENST00000589890 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.74
CDIP1-214ENST00000589890 ABCA10Q8WWZ4 1543 aa19.63■□□□□ 0.73
CDIP1-214ENST00000589890 TDRD9Q8NDG6 1382 aaKnown RBP19.63■□□□□ 0.73
CDIP1-214ENST00000589890 ABCA5Q8WWZ7 1642 aa19.6■□□□□ 0.73
CDIP1-214ENST00000589890 DNAJC5Q9H3Z4 198 aa19.59■□□□□ 0.73
CDIP1-214ENST00000589890 PBRM1Q86U86 1689 aa19.57■□□□□ 0.72
CDIP1-214ENST00000589890 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
CDIP1-214ENST00000589890 GRIN2BQ13224 1484 aa19.53■□□□□ 0.72
CDIP1-214ENST00000589890 CHD1O14646 1710 aa19.52■□□□□ 0.72
CDIP1-214ENST00000589890 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
CDIP1-214ENST00000589890 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
CDIP1-214ENST00000589890 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
CDIP1-214ENST00000589890 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
CDIP1-214ENST00000589890 ERICH3Q5RHP9 1530 aa19.41■□□□□ 0.7
CDIP1-214ENST00000589890 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
CDIP1-214ENST00000589890 FBLN2P98095 1184 aa19.38■□□□□ 0.69
CDIP1-214ENST00000589890 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
CDIP1-214ENST00000589890 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
CDIP1-214ENST00000589890 FHAD1B1AJZ9 1412 aa19.31■□□□□ 0.68
CDIP1-214ENST00000589890 GRIN2AQ12879 1464 aa19.3■□□□□ 0.68
CDIP1-214ENST00000589890 CLASP1Q7Z460 1538 aa19.29■□□□□ 0.68
CDIP1-214ENST00000589890 TRIM41Q8WV44 630 aa19.28■□□□□ 0.68
CDIP1-214ENST00000589890 CUL7Q14999 1698 aa19.27■□□□□ 0.67
CDIP1-214ENST00000589890 IGF1RP08069 1367 aa19.24■□□□□ 0.67
CDIP1-214ENST00000589890 CEP170Q5SW79 1584 aa19.23■□□□□ 0.67
CDIP1-214ENST00000589890 RUSC2Q8N2Y8 1516 aa19.22■□□□□ 0.67
CDIP1-214ENST00000589890 RIMBP3CA6NJZ7 1639 aa19.22■□□□□ 0.67
CDIP1-214ENST00000589890 RIMBP3BA6NNM3 1639 aa19.22■□□□□ 0.67
CDIP1-214ENST00000589890 RIMBP3Q9UFD9 1639 aa19.22■□□□□ 0.67
CDIP1-214ENST00000589890 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
CDIP1-214ENST00000589890 NUP160Q12769 1436 aa19.2■□□□□ 0.66
CDIP1-214ENST00000589890 CARMIL1Q5VZK9 1371 aa19.12■□□□□ 0.65
CDIP1-214ENST00000589890 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
CDIP1-214ENST00000589890 SHROOM2Q13796 1616 aa19.1■□□□□ 0.65
CDIP1-214ENST00000589890 ARAP1Q96P48 1450 aa19.05■□□□□ 0.64
CDIP1-214ENST00000589890 RAPGEF2Q9Y4G8 1499 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms