RNA–Protein interactions for RNA: ENST00000589695.1

TREM1-205, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-205ENST00000589695 NISCHQ9Y2I1 1504 aa12.58□□□□□ -0.4
TREM1-205ENST00000589695 CCDC180Q9P1Z9 1646 aa11.2□□□□□ -0.62
TREM1-205ENST00000589695 ABCC9O60706 1549 aa11.1□□□□□ -0.63
TREM1-205ENST00000589695 AEBP2Q6ZN18 517 aaPredicted RBP11.05□□□□□ -0.64
TREM1-205ENST00000589695 RB1CC1Q8TDY2 1594 aa10.62□□□□□ -0.71
TREM1-205ENST00000589695 NACADO15069 1562 aa10.6□□□□□ -0.71
TREM1-205ENST00000589695 MYO15BQ96JP2 1530 aa10.54□□□□□ -0.72
TREM1-205ENST00000589695 DCAF8L2P0C7V8 631 aa10.54□□□□□ -0.72
TREM1-205ENST00000589695 DCAF1Q9Y4B6 1507 aa10.43□□□□□ -0.74
TREM1-205ENST00000589695 ZCCHC6Q5VYS8 1495 aaKnown RBP10.43□□□□□ -0.74
TREM1-205ENST00000589695 DNAJC5BQ9UF47 199 aa10.42□□□□□ -0.74
TREM1-205ENST00000589695 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
TREM1-205ENST00000589695 BICRAQ9NZM4 1560 aa10.35□□□□□ -0.75
TREM1-205ENST00000589695 UNC13AQ9UPW8 1703 aa10.33□□□□□ -0.76
TREM1-205ENST00000589695 CHIC1Q5VXU3 224 aa10.3□□□□□ -0.76
TREM1-205ENST00000589695 SHROOM4Q9ULL8 1493 aa10.23□□□□□ -0.77
TREM1-205ENST00000589695 SCRIBQ14160 1630 aa10.18□□□□□ -0.78
TREM1-205ENST00000589695 EIF4G1Q04637 1599 aaKnown RBP10.06□□□□□ -0.8
TREM1-205ENST00000589695 CC2D2AQ9P2K1 1620 aa10.04□□□□□ -0.8
TREM1-205ENST00000589695 CECR2Q9BXF3 1484 aa10.01□□□□□ -0.81
TREM1-205ENST00000589695 NCAPD3P42695 1498 aa9.84□□□□□ -0.83
TREM1-205ENST00000589695 ATAD2BQ9ULI0 1458 aa9.79□□□□□ -0.84
TREM1-205ENST00000589695 SMARCA4P51532 1647 aa9.76□□□□□ -0.85
TREM1-205ENST00000589695 BAZ1AQ9NRL2 1556 aaPredicted RBP9.74□□□□□ -0.85
TREM1-205ENST00000589695 SMARCA2P51531 1590 aa9.73□□□□□ -0.85
TREM1-205ENST00000589695 HMGXB3Q12766 1538 aa9.72□□□□□ -0.85
TREM1-205ENST00000589695 PEG3Q9GZU2 1588 aa9.71□□□□□ -0.85
TREM1-205ENST00000589695 MROH2BQ7Z745 1585 aa9.69□□□□□ -0.86
TREM1-205ENST00000589695 BAZ1BQ9UIG0 1483 aaKnown RBP9.66□□□□□ -0.86
TREM1-205ENST00000589695 NESP48681 1621 aa9.59□□□□□ -0.87
TREM1-205ENST00000589695 CUX2O14529 1486 aa9.56□□□□□ -0.88
TREM1-205ENST00000589695 RSF1Q96T23 1441 aaPredicted RBP9.56□□□□□ -0.88
TREM1-205ENST00000589695 ERCC6Q03468 1493 aa9.55□□□□□ -0.88
TREM1-205ENST00000589695 WIZO95785 1651 aa9.54□□□□□ -0.88
TREM1-205ENST00000589695 LAMC3Q9Y6N6 1575 aa9.54□□□□□ -0.88
TREM1-205ENST00000589695 CADPSQ9ULU8 1353 aa9.52□□□□□ -0.88
TREM1-205ENST00000589695 PDS5BQ9NTI5 1447 aa9.5□□□□□ -0.89
TREM1-205ENST00000589695 DNAJC5Q9H3Z4 198 aa9.5□□□□□ -0.89
TREM1-205ENST00000589695 SENP3Q9H4L4 574 aaPredicted RBP9.46□□□□□ -0.9
TREM1-205ENST00000589695 THOC2Q8NI27 1593 aaKnown RBP9.45□□□□□ -0.9
TREM1-205ENST00000589695 TOP2AP11388 1531 aaKnown RBP9.44□□□□□ -0.9
TREM1-205ENST00000589695 CFTRP13569 1480 aa9.43□□□□□ -0.9
TREM1-205ENST00000589695 KIF21AQ7Z4S6 1674 aa9.4□□□□□ -0.9
TREM1-205ENST00000589695 MRC2Q9UBG0 1479 aa9.39□□□□□ -0.91
TREM1-205ENST00000589695 CCDC88BA6NC98 1476 aa9.37□□□□□ -0.91
TREM1-205ENST00000589695 FANCD2Q9BXW9 1451 aa9.37□□□□□ -0.91
TREM1-205ENST00000589695 WDR62O43379 1518 aa9.36□□□□□ -0.91
TREM1-205ENST00000589695 CEP164Q9UPV0 1460 aa9.35□□□□□ -0.91
TREM1-205ENST00000589695 PHF23Q9BUL5 403 aaPredicted RBP9.31□□□□□ -0.92
TREM1-205ENST00000589695 URB2Q14146 1524 aaKnown RBP9.3□□□□□ -0.92
TREM1-205ENST00000589695 PRDM2Q13029 1718 aa9.22□□□□□ -0.93
TREM1-205ENST00000589695 ABCC8Q09428 1581 aa9.22□□□□□ -0.93
TREM1-205ENST00000589695 TOPBP1Q92547 1522 aa9.21□□□□□ -0.94
TREM1-205ENST00000589695 IFT140Q96RY7 1462 aa9.19□□□□□ -0.94
TREM1-205ENST00000589695 DNMBPQ6XZF7 1577 aa9.17□□□□□ -0.94
TREM1-205ENST00000589695 OSCARQ8IYS5 282 aa9.17□□□□□ -0.94
TREM1-205ENST00000589695 ZNF608Q9ULD9 1512 aaPredicted RBP9.16□□□□□ -0.94
TREM1-205ENST00000589695 SUPT5HO00267 1087 aaKnown RBP9.15□□□□□ -0.94
TREM1-205ENST00000589695 POLA1P09884 1462 aaPredicted RBP9.12□□□□□ -0.95
TREM1-205ENST00000589695 TARBP1Q13395 1621 aaKnown RBP9.12□□□□□ -0.95
TREM1-205ENST00000589695 AQRO60306 1485 aaKnown RBP eCLIP9.1□□□□□ -0.95
TREM1-205ENST00000589695 POTEDQ86YR6 584 aa9.1□□□□□ -0.95
TREM1-205ENST00000589695 SOGA1O94964 1423 aa9.1□□□□□ -0.95
TREM1-205ENST00000589695 CUX1P39880 1505 aa9.09□□□□□ -0.95
TREM1-205ENST00000589695 RAD54L2Q9Y4B4 1467 aa9.08□□□□□ -0.96
TREM1-205ENST00000589695 TDRD9Q8NDG6 1382 aaKnown RBP9.07□□□□□ -0.96
TREM1-205ENST00000589695 FGD5Q6ZNL6 1462 aa9.07□□□□□ -0.96
TREM1-205ENST00000589695 EIF4G3O43432 1585 aaKnown RBP9.07□□□□□ -0.96
TREM1-205ENST00000589695 WDR97A6NE52 1622 aa9.03□□□□□ -0.96
TREM1-205ENST00000589695 TRIM41Q8WV44 630 aa9.02□□□□□ -0.97
TREM1-205ENST00000589695 ABCA10Q8WWZ4 1543 aa9□□□□□ -0.97
TREM1-205ENST00000589695 GRIN2BQ13224 1484 aa8.99□□□□□ -0.97
TREM1-205ENST00000589695 WRNQ14191 1432 aaPredicted RBP eCLIP8.98□□□□□ -0.97
TREM1-205ENST00000589695 GAPVD1Q14C86 1478 aa8.98□□□□□ -0.97
TREM1-205ENST00000589695 MAGI1Q96QZ7 1491 aaPredicted RBP8.98□□□□□ -0.97
TREM1-205ENST00000589695 FBLN2P98095 1184 aa8.98□□□□□ -0.97
TREM1-205ENST00000589695 SNAPC4Q5SXM2 1469 aa8.97□□□□□ -0.97
TREM1-205ENST00000589695 ARHGEF11O15085 1522 aa8.97□□□□□ -0.97
TREM1-205ENST00000589695 CHMP7Q8WUX9 453 aaPredicted RBP8.97□□□□□ -0.97
TREM1-205ENST00000589695 RIMBP3CA6NJZ7 1639 aa8.96□□□□□ -0.98
TREM1-205ENST00000589695 RIMBP3BA6NNM3 1639 aa8.96□□□□□ -0.98
TREM1-205ENST00000589695 TOP2BQ02880 1626 aa8.96□□□□□ -0.98
TREM1-205ENST00000589695 RIMBP3Q9UFD9 1639 aa8.96□□□□□ -0.98
TREM1-205ENST00000589695 CHD1O14646 1710 aa8.96□□□□□ -0.98
TREM1-205ENST00000589695 SYNJ2O15056 1496 aa8.96□□□□□ -0.98
TREM1-205ENST00000589695 BIVM-ERCC5R4GMW8 1640 aa8.94□□□□□ -0.98
TREM1-205ENST00000589695 SYNJ1O43426 1573 aa8.94□□□□□ -0.98
TREM1-205ENST00000589695 ABCA5Q8WWZ7 1642 aa8.94□□□□□ -0.98
TREM1-205ENST00000589695 CLASP1Q7Z460 1538 aa8.93□□□□□ -0.98
TREM1-205ENST00000589695 CYB5RLQ6IPT4 315 aa8.92□□□□□ -0.98
TREM1-205ENST00000589695 ARAP1Q96P48 1450 aa8.89□□□□□ -0.99
TREM1-205ENST00000589695 PBRM1Q86U86 1689 aa8.89□□□□□ -0.99
TREM1-205ENST00000589695 FOXD1Q16676 465 aa8.89□□□□□ -0.99
TREM1-205ENST00000589695 ERICH3Q5RHP9 1530 aa8.88□□□□□ -0.99
TREM1-205ENST00000589695 GRIN2AQ12879 1464 aa8.88□□□□□ -0.99
TREM1-205ENST00000589695 FHAD1B1AJZ9 1412 aa8.88□□□□□ -0.99
TREM1-205ENST00000589695 NUP160Q12769 1436 aa8.87□□□□□ -0.99
TREM1-205ENST00000589695 ADAMTS12P58397 1594 aa8.86□□□□□ -0.99
TREM1-205ENST00000589695 IGF1RP08069 1367 aa8.85□□□□□ -0.99
TREM1-205ENST00000589695 CEP170Q5SW79 1584 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms