RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 NISCHQ9Y2I1 1504 aa24.7■■□□□ 1.54
TREM1-204ENST00000589614 ABCC9O60706 1549 aa23.08■■□□□ 1.29
TREM1-204ENST00000589614 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
TREM1-204ENST00000589614 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
TREM1-204ENST00000589614 CCDC180Q9P1Z9 1646 aa22.55■■□□□ 1.2
TREM1-204ENST00000589614 DNAJC5BQ9UF47 199 aa22.27■■□□□ 1.16
TREM1-204ENST00000589614 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
TREM1-204ENST00000589614 NACADO15069 1562 aa21.45■■□□□ 1.02
TREM1-204ENST00000589614 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 1.01
TREM1-204ENST00000589614 UNC13AQ9UPW8 1703 aa21.29■■□□□ 1
TREM1-204ENST00000589614 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.97
TREM1-204ENST00000589614 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
TREM1-204ENST00000589614 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
TREM1-204ENST00000589614 MYO15BQ96JP2 1530 aa20.98■□□□□ 0.95
TREM1-204ENST00000589614 CECR2Q9BXF3 1484 aa20.91■□□□□ 0.94
TREM1-204ENST00000589614 CC2D2AQ9P2K1 1620 aa20.88■□□□□ 0.93
TREM1-204ENST00000589614 SHROOM4Q9ULL8 1493 aa20.87■□□□□ 0.93
TREM1-204ENST00000589614 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
TREM1-204ENST00000589614 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
TREM1-204ENST00000589614 PHF23Q9BUL5 403 aaPredicted RBP20.42■□□□□ 0.86
TREM1-204ENST00000589614 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
TREM1-204ENST00000589614 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
TREM1-204ENST00000589614 CUX2O14529 1486 aa20.28■□□□□ 0.84
TREM1-204ENST00000589614 ERCC6Q03468 1493 aa20■□□□□ 0.79
TREM1-204ENST00000589614 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
TREM1-204ENST00000589614 TRIM41Q8WV44 630 aa19.71■□□□□ 0.75
TREM1-204ENST00000589614 THOC2Q8NI27 1593 aaKnown RBP19.65■□□□□ 0.74
TREM1-204ENST00000589614 NESP48681 1621 aa19.63■□□□□ 0.73
TREM1-204ENST00000589614 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
TREM1-204ENST00000589614 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
TREM1-204ENST00000589614 SMARCA2P51531 1590 aa19.55■□□□□ 0.72
TREM1-204ENST00000589614 LAMC3Q9Y6N6 1575 aa19.48■□□□□ 0.71
TREM1-204ENST00000589614 SMARCA4P51532 1647 aa19.43■□□□□ 0.7
TREM1-204ENST00000589614 KIF21AQ7Z4S6 1674 aa19.43■□□□□ 0.7
TREM1-204ENST00000589614 BAZ1BQ9UIG0 1483 aaKnown RBP19.37■□□□□ 0.69
TREM1-204ENST00000589614 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
TREM1-204ENST00000589614 PEG3Q9GZU2 1588 aa19.3■□□□□ 0.68
TREM1-204ENST00000589614 BAZ1AQ9NRL2 1556 aaPredicted RBP19.27■□□□□ 0.67
TREM1-204ENST00000589614 WDR62O43379 1518 aa19.22■□□□□ 0.67
TREM1-204ENST00000589614 MRC2Q9UBG0 1479 aa19.22■□□□□ 0.67
TREM1-204ENST00000589614 SENP3Q9H4L4 574 aaPredicted RBP19.21■□□□□ 0.67
TREM1-204ENST00000589614 OSCARQ8IYS5 282 aa19.18■□□□□ 0.66
TREM1-204ENST00000589614 CADPSQ9ULU8 1353 aa19.12■□□□□ 0.65
TREM1-204ENST00000589614 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
TREM1-204ENST00000589614 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
TREM1-204ENST00000589614 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
TREM1-204ENST00000589614 PLPPR3Q6T4P5 718 aa19.01■□□□□ 0.63
TREM1-204ENST00000589614 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
TREM1-204ENST00000589614 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
TREM1-204ENST00000589614 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
TREM1-204ENST00000589614 ARHGEF11O15085 1522 aa18.89■□□□□ 0.61
TREM1-204ENST00000589614 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
TREM1-204ENST00000589614 CFTRP13569 1480 aa18.78■□□□□ 0.6
TREM1-204ENST00000589614 TRHP20396 242 aaPredicted RBP18.74■□□□□ 0.59
TREM1-204ENST00000589614 CYB5RLQ6IPT4 315 aa18.73■□□□□ 0.59
TREM1-204ENST00000589614 WIZO95785 1651 aa18.73■□□□□ 0.59
TREM1-204ENST00000589614 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
TREM1-204ENST00000589614 ZNF608Q9ULD9 1512 aaPredicted RBP18.65■□□□□ 0.58
TREM1-204ENST00000589614 ARAP1Q96P48 1450 aa18.64■□□□□ 0.57
TREM1-204ENST00000589614 PRDM2Q13029 1718 aa18.61■□□□□ 0.57
TREM1-204ENST00000589614 RSF1Q96T23 1441 aaPredicted RBP18.58■□□□□ 0.57
TREM1-204ENST00000589614 EIF4G3O43432 1585 aaKnown RBP18.56■□□□□ 0.56
TREM1-204ENST00000589614 CHD1O14646 1710 aa18.56■□□□□ 0.56
TREM1-204ENST00000589614 TOP2AP11388 1531 aaKnown RBP18.47■□□□□ 0.55
TREM1-204ENST00000589614 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
TREM1-204ENST00000589614 ABCC8Q09428 1581 aa18.44■□□□□ 0.54
TREM1-204ENST00000589614 TARBP1Q13395 1621 aaKnown RBP18.4■□□□□ 0.54
TREM1-204ENST00000589614 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.53
TREM1-204ENST00000589614 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
TREM1-204ENST00000589614 FBLN2P98095 1184 aa18.36■□□□□ 0.53
TREM1-204ENST00000589614 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.53
TREM1-204ENST00000589614 SYNJ1O43426 1573 aa18.26■□□□□ 0.51
TREM1-204ENST00000589614 POLA1P09884 1462 aaPredicted RBP18.25■□□□□ 0.51
TREM1-204ENST00000589614 CCDC88BA6NC98 1476 aa18.24■□□□□ 0.51
TREM1-204ENST00000589614 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
TREM1-204ENST00000589614 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
TREM1-204ENST00000589614 GAPVD1Q14C86 1478 aa18.17■□□□□ 0.5
TREM1-204ENST00000589614 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
TREM1-204ENST00000589614 CHMP7Q8WUX9 453 aaPredicted RBP18.16■□□□□ 0.5
TREM1-204ENST00000589614 TDRD9Q8NDG6 1382 aaKnown RBP18.15■□□□□ 0.5
TREM1-204ENST00000589614 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.49
TREM1-204ENST00000589614 SOGA1O94964 1423 aa18.12■□□□□ 0.49
TREM1-204ENST00000589614 SYNJ2O15056 1496 aa18.11■□□□□ 0.49
TREM1-204ENST00000589614 GRIN2BQ13224 1484 aa18.07■□□□□ 0.48
TREM1-204ENST00000589614 KIF13AQ9H1H9 1805 aa18.02■□□□□ 0.48
TREM1-204ENST00000589614 ILDR1Q86SU0 546 aaPredicted RBP18.02■□□□□ 0.48
TREM1-204ENST00000589614 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
TREM1-204ENST00000589614 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
TREM1-204ENST00000589614 ERCC6L2Q5T890 1561 aa17.94■□□□□ 0.46
TREM1-204ENST00000589614 CEP170Q5SW79 1584 aa17.88■□□□□ 0.45
TREM1-204ENST00000589614 CUX1P39880 1505 aa17.88■□□□□ 0.45
TREM1-204ENST00000589614 ADRA2BP18089 450 aa17.86■□□□□ 0.45
TREM1-204ENST00000589614 SHROOM2Q13796 1616 aa17.86■□□□□ 0.45
TREM1-204ENST00000589614 KDM4FA0A1W2PPD8 638 aa17.85■□□□□ 0.45
TREM1-204ENST00000589614 ABCA5Q8WWZ7 1642 aa17.85■□□□□ 0.45
TREM1-204ENST00000589614 GRIN2AQ12879 1464 aa17.84■□□□□ 0.45
TREM1-204ENST00000589614 NUP160Q12769 1436 aa17.82■□□□□ 0.44
TREM1-204ENST00000589614 FOXD1Q16676 465 aa17.8■□□□□ 0.44
TREM1-204ENST00000589614 ABCA10Q8WWZ4 1543 aa17.8■□□□□ 0.44
TREM1-204ENST00000589614 ABCC10Q5T3U5 1492 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms