RNA–Protein interactions for RNA: ENST00000589545.1

HPS5-211, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 3

Gene HPS5, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-211ENST00000589545 NISCHQ9Y2I1 1504 aa43.37■■■■■ 4.53
HPS5-211ENST00000589545 CCDC180Q9P1Z9 1646 aa38.54■■■■□ 3.76
HPS5-211ENST00000589545 ABCC9O60706 1549 aa37.77■■■■□ 3.64
HPS5-211ENST00000589545 RB1CC1Q8TDY2 1594 aa36.2■■■■□ 3.39
HPS5-211ENST00000589545 ZCCHC6Q5VYS8 1495 aaKnown RBP36.18■■■■□ 3.38
HPS5-211ENST00000589545 DCAF8L2P0C7V8 631 aa36.15■■■■□ 3.38
HPS5-211ENST00000589545 NACADO15069 1562 aa36.15■■■■□ 3.38
HPS5-211ENST00000589545 MYO15BQ96JP2 1530 aa35.88■■■■□ 3.33
HPS5-211ENST00000589545 DCAF1Q9Y4B6 1507 aa35.78■■■■□ 3.32
HPS5-211ENST00000589545 UNC13AQ9UPW8 1703 aa35.64■■■■□ 3.3
HPS5-211ENST00000589545 SCRIBQ14160 1630 aa35.31■■■■□ 3.24
HPS5-211ENST00000589545 BICRAQ9NZM4 1560 aa35.29■■■■□ 3.24
HPS5-211ENST00000589545 PABPN1Q86U42 306 aaKnown RBP eCLIP35.27■■■■□ 3.24
HPS5-211ENST00000589545 DNAJC5BQ9UF47 199 aa34.66■■■■□ 3.14
HPS5-211ENST00000589545 SHROOM4Q9ULL8 1493 aa34.63■■■■□ 3.13
HPS5-211ENST00000589545 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
HPS5-211ENST00000589545 CC2D2AQ9P2K1 1620 aa34.15■■■■□ 3.06
HPS5-211ENST00000589545 CECR2Q9BXF3 1484 aa33.89■■■■□ 3.02
HPS5-211ENST00000589545 SMARCA4P51532 1647 aa33.71■■■□□ 2.99
HPS5-211ENST00000589545 BAZ1AQ9NRL2 1556 aaPredicted RBP33.56■■■□□ 2.96
HPS5-211ENST00000589545 MROH2BQ7Z745 1585 aa33.52■■■□□ 2.96
HPS5-211ENST00000589545 ATAD2BQ9ULI0 1458 aa33.45■■■□□ 2.95
HPS5-211ENST00000589545 NCAPD3P42695 1498 aa33.35■■■□□ 2.93
HPS5-211ENST00000589545 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
HPS5-211ENST00000589545 PEG3Q9GZU2 1588 aa33.3■■■□□ 2.92
HPS5-211ENST00000589545 HMGXB3Q12766 1538 aa33.24■■■□□ 2.91
HPS5-211ENST00000589545 WIZO95785 1651 aa33.2■■■□□ 2.91
HPS5-211ENST00000589545 BAZ1BQ9UIG0 1483 aaKnown RBP33.16■■■□□ 2.9
HPS5-211ENST00000589545 RSF1Q96T23 1441 aaPredicted RBP33.07■■■□□ 2.88
HPS5-211ENST00000589545 NESP48681 1621 aa32.75■■■□□ 2.83
HPS5-211ENST00000589545 TOP2AP11388 1531 aaKnown RBP32.75■■■□□ 2.83
HPS5-211ENST00000589545 LAMC3Q9Y6N6 1575 aa32.49■■■□□ 2.79
HPS5-211ENST00000589545 ERCC6Q03468 1493 aa32.42■■■□□ 2.78
HPS5-211ENST00000589545 KIF21AQ7Z4S6 1674 aa32.39■■■□□ 2.78
HPS5-211ENST00000589545 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
HPS5-211ENST00000589545 CCDC88BA6NC98 1476 aa32.36■■■□□ 2.77
HPS5-211ENST00000589545 SUPT5HO00267 1087 aaKnown RBP32.25■■■□□ 2.75
HPS5-211ENST00000589545 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
HPS5-211ENST00000589545 CFTRP13569 1480 aa32.23■■■□□ 2.75
HPS5-211ENST00000589545 PDS5BQ9NTI5 1447 aa32.18■■■□□ 2.74
HPS5-211ENST00000589545 PRDM2Q13029 1718 aa32.11■■■□□ 2.73
HPS5-211ENST00000589545 FANCD2Q9BXW9 1451 aa32.08■■■□□ 2.73
HPS5-211ENST00000589545 CUX2O14529 1486 aa32.03■■■□□ 2.72
HPS5-211ENST00000589545 CEP164Q9UPV0 1460 aa32.02■■■□□ 2.72
HPS5-211ENST00000589545 MRC2Q9UBG0 1479 aa31.97■■■□□ 2.71
HPS5-211ENST00000589545 WDR62O43379 1518 aa31.9■■■□□ 2.7
HPS5-211ENST00000589545 URB2Q14146 1524 aaKnown RBP31.85■■■□□ 2.69
HPS5-211ENST00000589545 TOPBP1Q92547 1522 aa31.6■■■□□ 2.65
HPS5-211ENST00000589545 DNMBPQ6XZF7 1577 aa31.56■■■□□ 2.64
HPS5-211ENST00000589545 CUX1P39880 1505 aa31.44■■■□□ 2.62
HPS5-211ENST00000589545 ABCC8Q09428 1581 aa31.39■■■□□ 2.62
HPS5-211ENST00000589545 POLA1P09884 1462 aaPredicted RBP31.34■■■□□ 2.61
HPS5-211ENST00000589545 ZNF608Q9ULD9 1512 aaPredicted RBP31.33■■■□□ 2.61
HPS5-211ENST00000589545 TARBP1Q13395 1621 aaKnown RBP31.31■■■□□ 2.6
HPS5-211ENST00000589545 IFT140Q96RY7 1462 aa31.3■■■□□ 2.6
HPS5-211ENST00000589545 FGD5Q6ZNL6 1462 aa31.29■■■□□ 2.6
HPS5-211ENST00000589545 RAD54L2Q9Y4B4 1467 aa31.27■■■□□ 2.6
HPS5-211ENST00000589545 SYNJ1O43426 1573 aa31.22■■■□□ 2.59
HPS5-211ENST00000589545 EIF4G3O43432 1585 aaKnown RBP31.2■■■□□ 2.58
HPS5-211ENST00000589545 BIVM-ERCC5R4GMW8 1640 aa31.15■■■□□ 2.58
HPS5-211ENST00000589545 WRNQ14191 1432 aaPredicted RBP eCLIP31.14■■■□□ 2.58
HPS5-211ENST00000589545 SOGA1O94964 1423 aa31.13■■■□□ 2.57
HPS5-211ENST00000589545 WDR97A6NE52 1622 aa31.12■■■□□ 2.57
HPS5-211ENST00000589545 TOP2BQ02880 1626 aa31.11■■■□□ 2.57
HPS5-211ENST00000589545 AQRO60306 1485 aaKnown RBP eCLIP31.09■■■□□ 2.57
HPS5-211ENST00000589545 TDRD9Q8NDG6 1382 aaKnown RBP31.02■■■□□ 2.56
HPS5-211ENST00000589545 DNAJC5Q9H3Z4 198 aa30.99■■■□□ 2.55
HPS5-211ENST00000589545 ABCA10Q8WWZ4 1543 aa30.92■■■□□ 2.54
HPS5-211ENST00000589545 ABCA5Q8WWZ7 1642 aa30.89■■■□□ 2.54
HPS5-211ENST00000589545 PBRM1Q86U86 1689 aa30.87■■■□□ 2.53
HPS5-211ENST00000589545 CHD1O14646 1710 aa30.84■■■□□ 2.53
HPS5-211ENST00000589545 SNAPC4Q5SXM2 1469 aa30.82■■■□□ 2.53
HPS5-211ENST00000589545 GAPVD1Q14C86 1478 aa30.79■■■□□ 2.52
HPS5-211ENST00000589545 GRIN2BQ13224 1484 aa30.76■■■□□ 2.51
HPS5-211ENST00000589545 MAGI1Q96QZ7 1491 aaPredicted RBP30.66■■■□□ 2.5
HPS5-211ENST00000589545 OSCARQ8IYS5 282 aa30.63■■■□□ 2.49
HPS5-211ENST00000589545 FBLN2P98095 1184 aa30.61■■■□□ 2.49
HPS5-211ENST00000589545 ADAMTS12P58397 1594 aa30.6■■■□□ 2.49
HPS5-211ENST00000589545 SYNJ2O15056 1496 aa30.57■■■□□ 2.48
HPS5-211ENST00000589545 ERICH3Q5RHP9 1530 aa30.52■■■□□ 2.48
HPS5-211ENST00000589545 CHMP7Q8WUX9 453 aaPredicted RBP30.47■■■□□ 2.47
HPS5-211ENST00000589545 CLASP1Q7Z460 1538 aa30.44■■■□□ 2.46
HPS5-211ENST00000589545 GRIN2AQ12879 1464 aa30.42■■■□□ 2.46
HPS5-211ENST00000589545 KIF27Q86VH2 1401 aa30.41■■■□□ 2.46
HPS5-211ENST00000589545 FHAD1B1AJZ9 1412 aa30.4■■■□□ 2.46
HPS5-211ENST00000589545 RUSC2Q8N2Y8 1516 aa30.4■■■□□ 2.46
HPS5-211ENST00000589545 RIMBP3CA6NJZ7 1639 aa30.38■■■□□ 2.45
HPS5-211ENST00000589545 RIMBP3BA6NNM3 1639 aa30.38■■■□□ 2.45
HPS5-211ENST00000589545 RIMBP3Q9UFD9 1639 aa30.38■■■□□ 2.45
HPS5-211ENST00000589545 CEP170Q5SW79 1584 aa30.37■■■□□ 2.45
HPS5-211ENST00000589545 IGF1RP08069 1367 aa30.34■■■□□ 2.45
HPS5-211ENST00000589545 ARHGEF11O15085 1522 aa30.33■■■□□ 2.45
HPS5-211ENST00000589545 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
HPS5-211ENST00000589545 CUL7Q14999 1698 aa30.29■■■□□ 2.44
HPS5-211ENST00000589545 NUP160Q12769 1436 aa30.27■■■□□ 2.44
HPS5-211ENST00000589545 ERCC6L2Q5T890 1561 aa30.15■■■□□ 2.42
HPS5-211ENST00000589545 ARAP1Q96P48 1450 aa30.14■■■□□ 2.42
HPS5-211ENST00000589545 CARMIL1Q5VZK9 1371 aa30.14■■■□□ 2.41
HPS5-211ENST00000589545 CHIC1Q5VXU3 224 aa30.1■■■□□ 2.41
HPS5-211ENST00000589545 SHROOM2Q13796 1616 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms