RNA–Protein interactions for RNA: ENST00000589542.1

ZNF562-207, Transcript of zinc finger protein 562, humanhuman

TSL 3

Gene ZNF562, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF562-207ENST00000589542 NISCHQ9Y2I1 1504 aa18.85■□□□□ 0.61
ZNF562-207ENST00000589542 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
ZNF562-207ENST00000589542 ABCC9O60706 1549 aa16.55■□□□□ 0.24
ZNF562-207ENST00000589542 AEBP2Q6ZN18 517 aaPredicted RBP16.34■□□□□ 0.21
ZNF562-207ENST00000589542 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.12
ZNF562-207ENST00000589542 NACADO15069 1562 aa15.81■□□□□ 0.12
ZNF562-207ENST00000589542 MYO15BQ96JP2 1530 aa15.74■□□□□ 0.11
ZNF562-207ENST00000589542 ZCCHC6Q5VYS8 1495 aaKnown RBP15.71■□□□□ 0.1
ZNF562-207ENST00000589542 DCAF8L2P0C7V8 631 aa15.64■□□□□ 0.09
ZNF562-207ENST00000589542 CHIC1Q5VXU3 224 aa15.63■□□□□ 0.09
ZNF562-207ENST00000589542 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
ZNF562-207ENST00000589542 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
ZNF562-207ENST00000589542 UNC13AQ9UPW8 1703 aa15.44■□□□□ 0.06
ZNF562-207ENST00000589542 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
ZNF562-207ENST00000589542 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
ZNF562-207ENST00000589542 SCRIBQ14160 1630 aa15.28■□□□□ 0.04
ZNF562-207ENST00000589542 SHROOM4Q9ULL8 1493 aa15.26■□□□□ 0.03
ZNF562-207ENST00000589542 EIF4G1Q04637 1599 aaKnown RBP15.01□□□□□ -0.01
ZNF562-207ENST00000589542 CC2D2AQ9P2K1 1620 aa14.96□□□□□ -0.01
ZNF562-207ENST00000589542 CECR2Q9BXF3 1484 aa14.89□□□□□ -0.03
ZNF562-207ENST00000589542 NCAPD3P42695 1498 aa14.64□□□□□ -0.07
ZNF562-207ENST00000589542 ATAD2BQ9ULI0 1458 aa14.63□□□□□ -0.07
ZNF562-207ENST00000589542 SMARCA4P51532 1647 aa14.63□□□□□ -0.07
ZNF562-207ENST00000589542 BAZ1AQ9NRL2 1556 aaPredicted RBP14.58□□□□□ -0.08
ZNF562-207ENST00000589542 SMARCA2P51531 1590 aa14.54□□□□□ -0.08
ZNF562-207ENST00000589542 MROH2BQ7Z745 1585 aa14.54□□□□□ -0.08
ZNF562-207ENST00000589542 PEG3Q9GZU2 1588 aa14.54□□□□□ -0.08
ZNF562-207ENST00000589542 HMGXB3Q12766 1538 aa14.53□□□□□ -0.08
ZNF562-207ENST00000589542 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
ZNF562-207ENST00000589542 RSF1Q96T23 1441 aaPredicted RBP14.33□□□□□ -0.11
ZNF562-207ENST00000589542 WIZO95785 1651 aa14.32□□□□□ -0.12
ZNF562-207ENST00000589542 NESP48681 1621 aa14.31□□□□□ -0.12
ZNF562-207ENST00000589542 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
ZNF562-207ENST00000589542 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
ZNF562-207ENST00000589542 TOP2AP11388 1531 aaKnown RBP14.19□□□□□ -0.14
ZNF562-207ENST00000589542 CADPSQ9ULU8 1353 aa14.19□□□□□ -0.14
ZNF562-207ENST00000589542 CUX2O14529 1486 aa14.18□□□□□ -0.14
ZNF562-207ENST00000589542 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
ZNF562-207ENST00000589542 PDS5BQ9NTI5 1447 aa14.11□□□□□ -0.15
ZNF562-207ENST00000589542 CFTRP13569 1480 aa14.1□□□□□ -0.15
ZNF562-207ENST00000589542 KIF21AQ7Z4S6 1674 aa14.06□□□□□ -0.16
ZNF562-207ENST00000589542 CCDC88BA6NC98 1476 aa14.04□□□□□ -0.16
ZNF562-207ENST00000589542 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
ZNF562-207ENST00000589542 MRC2Q9UBG0 1479 aa14□□□□□ -0.17
ZNF562-207ENST00000589542 WDR62O43379 1518 aa13.99□□□□□ -0.17
ZNF562-207ENST00000589542 CEP164Q9UPV0 1460 aa13.97□□□□□ -0.17
ZNF562-207ENST00000589542 DNAJC5Q9H3Z4 198 aa13.91□□□□□ -0.18
ZNF562-207ENST00000589542 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
ZNF562-207ENST00000589542 SENP3Q9H4L4 574 aaPredicted RBP13.88□□□□□ -0.19
ZNF562-207ENST00000589542 PRDM2Q13029 1718 aa13.83□□□□□ -0.2
ZNF562-207ENST00000589542 TOPBP1Q92547 1522 aa13.77□□□□□ -0.21
ZNF562-207ENST00000589542 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.21
ZNF562-207ENST00000589542 SUPT5HO00267 1087 aaKnown RBP13.73□□□□□ -0.21
ZNF562-207ENST00000589542 DNMBPQ6XZF7 1577 aa13.73□□□□□ -0.21
ZNF562-207ENST00000589542 ABCC8Q09428 1581 aa13.71□□□□□ -0.21
ZNF562-207ENST00000589542 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
ZNF562-207ENST00000589542 IFT140Q96RY7 1462 aa13.7□□□□□ -0.22
ZNF562-207ENST00000589542 POLA1P09884 1462 aaPredicted RBP13.67□□□□□ -0.22
ZNF562-207ENST00000589542 CUX1P39880 1505 aa13.64□□□□□ -0.23
ZNF562-207ENST00000589542 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
ZNF562-207ENST00000589542 RAD54L2Q9Y4B4 1467 aa13.6□□□□□ -0.23
ZNF562-207ENST00000589542 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
ZNF562-207ENST00000589542 FGD5Q6ZNL6 1462 aa13.59□□□□□ -0.23
ZNF562-207ENST00000589542 AQRO60306 1485 aaKnown RBP eCLIP13.57□□□□□ -0.243e-6■■■■□ 22.4
ZNF562-207ENST00000589542 SOGA1O94964 1423 aa13.56□□□□□ -0.24
ZNF562-207ENST00000589542 TDRD9Q8NDG6 1382 aaKnown RBP13.52□□□□□ -0.25
ZNF562-207ENST00000589542 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
ZNF562-207ENST00000589542 WDR97A6NE52 1622 aa13.5□□□□□ -0.25
ZNF562-207ENST00000589542 ABCA10Q8WWZ4 1543 aa13.48□□□□□ -0.25
ZNF562-207ENST00000589542 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
ZNF562-207ENST00000589542 SYNJ1O43426 1573 aa13.46□□□□□ -0.25
ZNF562-207ENST00000589542 TOP2BQ02880 1626 aa13.46□□□□□ -0.26
ZNF562-207ENST00000589542 SNAPC4Q5SXM2 1469 aa13.44□□□□□ -0.26
ZNF562-207ENST00000589542 BIVM-ERCC5R4GMW8 1640 aa13.44□□□□□ -0.26
ZNF562-207ENST00000589542 ABCA5Q8WWZ7 1642 aa13.42□□□□□ -0.26
ZNF562-207ENST00000589542 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
ZNF562-207ENST00000589542 MAGI1Q96QZ7 1491 aaPredicted RBP13.42□□□□□ -0.26
ZNF562-207ENST00000589542 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
ZNF562-207ENST00000589542 CHD1O14646 1710 aa13.38□□□□□ -0.27
ZNF562-207ENST00000589542 SYNJ2O15056 1496 aa13.36□□□□□ -0.27
ZNF562-207ENST00000589542 ARHGEF11O15085 1522 aa13.35□□□□□ -0.27
ZNF562-207ENST00000589542 CLASP1Q7Z460 1538 aa13.34□□□□□ -0.27
ZNF562-207ENST00000589542 RIMBP3CA6NJZ7 1639 aa13.34□□□□□ -0.27
ZNF562-207ENST00000589542 RIMBP3BA6NNM3 1639 aa13.34□□□□□ -0.27
ZNF562-207ENST00000589542 RIMBP3Q9UFD9 1639 aa13.34□□□□□ -0.27
ZNF562-207ENST00000589542 PBRM1Q86U86 1689 aa13.32□□□□□ -0.28
ZNF562-207ENST00000589542 FBLN2P98095 1184 aa13.32□□□□□ -0.28
ZNF562-207ENST00000589542 CHMP7Q8WUX9 453 aaPredicted RBP13.3□□□□□ -0.28
ZNF562-207ENST00000589542 ADAMTS12P58397 1594 aa13.29□□□□□ -0.28
ZNF562-207ENST00000589542 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
ZNF562-207ENST00000589542 ERICH3Q5RHP9 1530 aa13.28□□□□□ -0.28
ZNF562-207ENST00000589542 GRIN2AQ12879 1464 aa13.27□□□□□ -0.29
ZNF562-207ENST00000589542 ARAP1Q96P48 1450 aa13.27□□□□□ -0.29
ZNF562-207ENST00000589542 FHAD1B1AJZ9 1412 aa13.26□□□□□ -0.29
ZNF562-207ENST00000589542 NUP160Q12769 1436 aa13.26□□□□□ -0.29
ZNF562-207ENST00000589542 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
ZNF562-207ENST00000589542 IGF1RP08069 1367 aa13.2□□□□□ -0.3
ZNF562-207ENST00000589542 CYB5RLQ6IPT4 315 aa13.18□□□□□ -0.3
ZNF562-207ENST00000589542 KIF27Q86VH2 1401 aa13.17□□□□□ -0.3
ZNF562-207ENST00000589542 ERCC6L2Q5T890 1561 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms