RNA–Protein interactions for RNA: ENST00000589298.2

APLP1-206, Transcript of amyloid beta precursor like protein 1, humanhuman

TSL 5

Gene APLP1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLP1-206ENST00000589298 NISCHQ9Y2I1 1504 aa31.49■■■□□ 2.63
APLP1-206ENST00000589298 ABCC9O60706 1549 aa28.89■■■□□ 2.21
APLP1-206ENST00000589298 CCDC180Q9P1Z9 1646 aa28.54■■■□□ 2.16
APLP1-206ENST00000589298 DNAJC5BQ9UF47 199 aa27.42■■□□□ 1.98
APLP1-206ENST00000589298 RB1CC1Q8TDY2 1594 aa27.34■■□□□ 1.97
APLP1-206ENST00000589298 NACADO15069 1562 aa27.02■■□□□ 1.92
APLP1-206ENST00000589298 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
APLP1-206ENST00000589298 PABPN1Q86U42 306 aaKnown RBP eCLIP26.77■■□□□ 1.88
APLP1-206ENST00000589298 DCAF8L2P0C7V8 631 aa26.7■■□□□ 1.86
APLP1-206ENST00000589298 BICRAQ9NZM4 1560 aa26.55■■□□□ 1.84
APLP1-206ENST00000589298 MYO15BQ96JP2 1530 aa26.48■■□□□ 1.83
APLP1-206ENST00000589298 ZCCHC6Q5VYS8 1495 aaKnown RBP26.19■■□□□ 1.78
APLP1-206ENST00000589298 SHROOM4Q9ULL8 1493 aa26.14■■□□□ 1.78
APLP1-206ENST00000589298 CC2D2AQ9P2K1 1620 aa26.11■■□□□ 1.77
APLP1-206ENST00000589298 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
APLP1-206ENST00000589298 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
APLP1-206ENST00000589298 SCRIBQ14160 1630 aa25.95■■□□□ 1.74
APLP1-206ENST00000589298 EIF4G1Q04637 1599 aaKnown RBP25.94■■□□□ 1.74
APLP1-206ENST00000589298 DNAJC5Q9H3Z4 198 aa25.52■■□□□ 1.68
APLP1-206ENST00000589298 CUX2O14529 1486 aa25.09■■□□□ 1.61
APLP1-206ENST00000589298 ERCC6Q03468 1493 aa24.99■■□□□ 1.59
APLP1-206ENST00000589298 NCAPD3P42695 1498 aa24.9■■□□□ 1.58
APLP1-206ENST00000589298 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
APLP1-206ENST00000589298 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
APLP1-206ENST00000589298 SMARCA2P51531 1590 aa24.72■■□□□ 1.55
APLP1-206ENST00000589298 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
APLP1-206ENST00000589298 NESP48681 1621 aa24.69■■□□□ 1.54
APLP1-206ENST00000589298 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
APLP1-206ENST00000589298 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
APLP1-206ENST00000589298 BAZ1AQ9NRL2 1556 aaPredicted RBP24.49■■□□□ 1.51
APLP1-206ENST00000589298 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
APLP1-206ENST00000589298 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
APLP1-206ENST00000589298 PEG3Q9GZU2 1588 aa24.45■■□□□ 1.5
APLP1-206ENST00000589298 PDS5BQ9NTI5 1447 aa24.3■■□□□ 1.48
APLP1-206ENST00000589298 MROH2BQ7Z745 1585 aa24.25■■□□□ 1.47
APLP1-206ENST00000589298 TRIM41Q8WV44 630 aa24.24■■□□□ 1.47
APLP1-206ENST00000589298 MRC2Q9UBG0 1479 aa24.15■■□□□ 1.46
APLP1-206ENST00000589298 WDR62O43379 1518 aa24.12■■□□□ 1.45
APLP1-206ENST00000589298 CADPSQ9ULU8 1353 aa24.12■■□□□ 1.45
APLP1-206ENST00000589298 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
APLP1-206ENST00000589298 RSF1Q96T23 1441 aaPredicted RBP24.08■■□□□ 1.44
APLP1-206ENST00000589298 WIZO95785 1651 aa23.99■■□□□ 1.43
APLP1-206ENST00000589298 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
APLP1-206ENST00000589298 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
APLP1-206ENST00000589298 OSCARQ8IYS5 282 aa23.81■■□□□ 1.4
APLP1-206ENST00000589298 CFTRP13569 1480 aa23.77■■□□□ 1.4
APLP1-206ENST00000589298 URB2Q14146 1524 aaKnown RBP23.72■■□□□ 1.39
APLP1-206ENST00000589298 TOP2AP11388 1531 aaKnown RBP23.71■■□□□ 1.39
APLP1-206ENST00000589298 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
APLP1-206ENST00000589298 RIMBP3CA6NJZ7 1639 aa23.66■■□□□ 1.38
APLP1-206ENST00000589298 RIMBP3BA6NNM3 1639 aa23.66■■□□□ 1.38
APLP1-206ENST00000589298 RIMBP3Q9UFD9 1639 aa23.66■■□□□ 1.38
APLP1-206ENST00000589298 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
APLP1-206ENST00000589298 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
APLP1-206ENST00000589298 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
APLP1-206ENST00000589298 EIF4G3O43432 1585 aaKnown RBP23.4■■□□□ 1.34
APLP1-206ENST00000589298 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
APLP1-206ENST00000589298 CCDC88BA6NC98 1476 aa23.38■■□□□ 1.33
APLP1-206ENST00000589298 CHD1O14646 1710 aa23.36■■□□□ 1.33
APLP1-206ENST00000589298 ABCC8Q09428 1581 aa23.3■■□□□ 1.32
APLP1-206ENST00000589298 DNMBPQ6XZF7 1577 aa23.29■■□□□ 1.32
APLP1-206ENST00000589298 CYB5RLQ6IPT4 315 aa23.28■■□□□ 1.32
APLP1-206ENST00000589298 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
APLP1-206ENST00000589298 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
APLP1-206ENST00000589298 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.3
APLP1-206ENST00000589298 TRHP20396 242 aaPredicted RBP23.18■■□□□ 1.3
APLP1-206ENST00000589298 POLA1P09884 1462 aaPredicted RBP23.12■■□□□ 1.29
APLP1-206ENST00000589298 FBLN2P98095 1184 aa23.12■■□□□ 1.29
APLP1-206ENST00000589298 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
APLP1-206ENST00000589298 CLASP1Q7Z460 1538 aa23.01■■□□□ 1.27
APLP1-206ENST00000589298 WDR97A6NE52 1622 aa23■■□□□ 1.27
APLP1-206ENST00000589298 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
APLP1-206ENST00000589298 TDRD9Q8NDG6 1382 aaKnown RBP22.97■■□□□ 1.27
APLP1-206ENST00000589298 SOGA1O94964 1423 aa22.97■■□□□ 1.27
APLP1-206ENST00000589298 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
APLP1-206ENST00000589298 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
APLP1-206ENST00000589298 MAGI1Q96QZ7 1491 aaPredicted RBP22.91■■□□□ 1.26
APLP1-206ENST00000589298 CHMP7Q8WUX9 453 aaPredicted RBP22.88■■□□□ 1.25
APLP1-206ENST00000589298 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
APLP1-206ENST00000589298 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
APLP1-206ENST00000589298 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
APLP1-206ENST00000589298 PBRM1Q86U86 1689 aa22.84■■□□□ 1.25
APLP1-206ENST00000589298 SYNJ2O15056 1496 aa22.84■■□□□ 1.25
APLP1-206ENST00000589298 CUX1P39880 1505 aa22.82■■□□□ 1.24
APLP1-206ENST00000589298 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.24
APLP1-206ENST00000589298 GAPVD1Q14C86 1478 aa22.76■■□□□ 1.23
APLP1-206ENST00000589298 ABCA5Q8WWZ7 1642 aa22.68■■□□□ 1.22
APLP1-206ENST00000589298 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
APLP1-206ENST00000589298 TOP2BQ02880 1626 aa22.61■■□□□ 1.21
APLP1-206ENST00000589298 ERCC6L2Q5T890 1561 aa22.61■■□□□ 1.21
APLP1-206ENST00000589298 BIVM-ERCC5R4GMW8 1640 aa22.59■■□□□ 1.21
APLP1-206ENST00000589298 GRIN2AQ12879 1464 aa22.56■■□□□ 1.2
APLP1-206ENST00000589298 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
APLP1-206ENST00000589298 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
APLP1-206ENST00000589298 KIF13AQ9H1H9 1805 aa22.5■■□□□ 1.19
APLP1-206ENST00000589298 SHROOM2Q13796 1616 aa22.5■■□□□ 1.19
APLP1-206ENST00000589298 NUP160Q12769 1436 aa22.49■■□□□ 1.19
APLP1-206ENST00000589298 EEA1Q15075 1411 aa22.42■■□□□ 1.18
APLP1-206ENST00000589298 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
APLP1-206ENST00000589298 ERICH3Q5RHP9 1530 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms