RNA–Protein interactions for RNA: ENST00000589176.1

PHF12-217, Transcript of PHD finger protein 12, humanhuman

TSL 5

Gene PHF12, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-217ENST00000589176 NISCHQ9Y2I1 1504 aa29.43■■■□□ 2.3
PHF12-217ENST00000589176 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
PHF12-217ENST00000589176 ZCCHC6Q5VYS8 1495 aaKnown RBP24.76■■□□□ 1.55
PHF12-217ENST00000589176 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
PHF12-217ENST00000589176 DCAF8L2P0C7V8 631 aa24.21■■□□□ 1.47
PHF12-217ENST00000589176 SHROOM4Q9ULL8 1493 aa24.08■■□□□ 1.45
PHF12-217ENST00000589176 ABCC9O60706 1549 aa24.07■■□□□ 1.44
PHF12-217ENST00000589176 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
PHF12-217ENST00000589176 NACADO15069 1562 aa23.82■■□□□ 1.4
PHF12-217ENST00000589176 RB1CC1Q8TDY2 1594 aa23.6■■□□□ 1.37
PHF12-217ENST00000589176 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
PHF12-217ENST00000589176 SUPT5HO00267 1087 aaKnown RBP23.23■■□□□ 1.31
PHF12-217ENST00000589176 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
PHF12-217ENST00000589176 BICRAQ9NZM4 1560 aa22.88■■□□□ 1.25
PHF12-217ENST00000589176 RSF1Q96T23 1441 aaPredicted RBP22.87■■□□□ 1.25
PHF12-217ENST00000589176 CECR2Q9BXF3 1484 aa22.84■■□□□ 1.25
PHF12-217ENST00000589176 MROH2BQ7Z745 1585 aa22.74■■□□□ 1.23
PHF12-217ENST00000589176 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
PHF12-217ENST00000589176 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
PHF12-217ENST00000589176 SMARCA4P51532 1647 aa22.62■■□□□ 1.21
PHF12-217ENST00000589176 WIZO95785 1651 aa22.59■■□□□ 1.21
PHF12-217ENST00000589176 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
PHF12-217ENST00000589176 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.16
PHF12-217ENST00000589176 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
PHF12-217ENST00000589176 SMARCA2P51531 1590 aa22.2■■□□□ 1.14
PHF12-217ENST00000589176 ATAD2BQ9ULI0 1458 aa22.18■■□□□ 1.14
PHF12-217ENST00000589176 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
PHF12-217ENST00000589176 CCDC88BA6NC98 1476 aa22.1■■□□□ 1.13
PHF12-217ENST00000589176 BAZ1BQ9UIG0 1483 aaKnown RBP22.07■■□□□ 1.12
PHF12-217ENST00000589176 HMGXB3Q12766 1538 aa21.97■■□□□ 1.11
PHF12-217ENST00000589176 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
PHF12-217ENST00000589176 TRIM41Q8WV44 630 aa21.83■■□□□ 1.09
PHF12-217ENST00000589176 CC2D2AQ9P2K1 1620 aa21.81■■□□□ 1.08
PHF12-217ENST00000589176 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
PHF12-217ENST00000589176 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
PHF12-217ENST00000589176 WRNQ14191 1432 aaPredicted RBP eCLIP21.53■■□□□ 1.049e-6■■■■■ 50.1
PHF12-217ENST00000589176 PRDM2Q13029 1718 aa21.52■■□□□ 1.04
PHF12-217ENST00000589176 CFTRP13569 1480 aa21.51■■□□□ 1.03
PHF12-217ENST00000589176 SYNJ1O43426 1573 aa21.46■■□□□ 1.03
PHF12-217ENST00000589176 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
PHF12-217ENST00000589176 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
PHF12-217ENST00000589176 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.02
PHF12-217ENST00000589176 TOP2BQ02880 1626 aa21.37■■□□□ 1.01
PHF12-217ENST00000589176 BIVM-ERCC5R4GMW8 1640 aa21.37■■□□□ 1.01
PHF12-217ENST00000589176 EEA1Q15075 1411 aa21.31■■□□□ 1
PHF12-217ENST00000589176 SOGA1O94964 1423 aa21.29■■□□□ 1
PHF12-217ENST00000589176 CUX1P39880 1505 aa21.27■■□□□ 1
PHF12-217ENST00000589176 LAMC3Q9Y6N6 1575 aa21.22■□□□□ 0.99
PHF12-217ENST00000589176 RUSC2Q8N2Y8 1516 aa21.21■□□□□ 0.99
PHF12-217ENST00000589176 FANCD2Q9BXW9 1451 aa21.19■□□□□ 0.98
PHF12-217ENST00000589176 NESP48681 1621 aa21.18■□□□□ 0.98
PHF12-217ENST00000589176 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
PHF12-217ENST00000589176 EHMT2Q96KQ7 1210 aa21.12■□□□□ 0.97
PHF12-217ENST00000589176 KIF21BO75037 1637 aa21.06■□□□□ 0.96
PHF12-217ENST00000589176 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
PHF12-217ENST00000589176 DNMBPQ6XZF7 1577 aa21.05■□□□□ 0.96
PHF12-217ENST00000589176 GOLGA3Q08378 1498 aa21.02■□□□□ 0.96
PHF12-217ENST00000589176 PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.96
PHF12-217ENST00000589176 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
PHF12-217ENST00000589176 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
PHF12-217ENST00000589176 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
PHF12-217ENST00000589176 TNIKQ9UKE5 1360 aa20.97■□□□□ 0.95
PHF12-217ENST00000589176 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
PHF12-217ENST00000589176 URB2Q14146 1524 aaKnown RBP20.92■□□□□ 0.94
PHF12-217ENST00000589176 CUX2O14529 1486 aa20.89■□□□□ 0.94
PHF12-217ENST00000589176 UBTFP17480 764 aaKnown RBP20.89■□□□□ 0.93
PHF12-217ENST00000589176 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
PHF12-217ENST00000589176 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
PHF12-217ENST00000589176 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
PHF12-217ENST00000589176 RAPGEF2Q9Y4G8 1499 aa20.87■□□□□ 0.93
PHF12-217ENST00000589176 PRXQ9BXM0 1461 aa20.86■□□□□ 0.93
PHF12-217ENST00000589176 ABCA10Q8WWZ4 1543 aa20.82■□□□□ 0.92
PHF12-217ENST00000589176 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
PHF12-217ENST00000589176 WDR97A6NE52 1622 aa20.79■□□□□ 0.92
PHF12-217ENST00000589176 MRC2Q9UBG0 1479 aa20.76■□□□□ 0.91
PHF12-217ENST00000589176 IGF1RP08069 1367 aa20.75■□□□□ 0.91
PHF12-217ENST00000589176 CLIP1P30622 1438 aa20.68■□□□□ 0.9
PHF12-217ENST00000589176 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
PHF12-217ENST00000589176 TARBP1Q13395 1621 aaKnown RBP20.67■□□□□ 0.9
PHF12-217ENST00000589176 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
PHF12-217ENST00000589176 CUL7Q14999 1698 aa20.65■□□□□ 0.9
PHF12-217ENST00000589176 WDR62O43379 1518 aa20.65■□□□□ 0.9
PHF12-217ENST00000589176 ERCC6Q03468 1493 aa20.62■□□□□ 0.89
PHF12-217ENST00000589176 PCGF6Q9BYE7 350 aa20.62■□□□□ 0.89
PHF12-217ENST00000589176 TRIM26Q12899 539 aaPredicted RBP20.61■□□□□ 0.89
PHF12-217ENST00000589176 GAPVD1Q14C86 1478 aa20.59■□□□□ 0.89
PHF12-217ENST00000589176 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.88
PHF12-217ENST00000589176 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
PHF12-217ENST00000589176 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
PHF12-217ENST00000589176 PBRM1Q86U86 1689 aa20.53■□□□□ 0.88
PHF12-217ENST00000589176 VPS8Q8N3P4 1428 aa20.52■□□□□ 0.87
PHF12-217ENST00000589176 DNAJC5Q9H3Z4 198 aa20.5■□□□□ 0.87
PHF12-217ENST00000589176 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
PHF12-217ENST00000589176 ARAP1Q96P48 1450 aa20.47■□□□□ 0.87
PHF12-217ENST00000589176 CTTNBP2Q8WZ74 1663 aa20.47■□□□□ 0.87
PHF12-217ENST00000589176 PPARGC1BQ86YN6 1023 aaKnown RBP20.44■□□□□ 0.86
PHF12-217ENST00000589176 ARHGAP35Q9NRY4 1499 aa20.43■□□□□ 0.86
PHF12-217ENST00000589176 AQRO60306 1485 aaKnown RBP eCLIP20.42■□□□□ 0.862e-7■■■■■ 35.2
PHF12-217ENST00000589176 GRIN2BQ13224 1484 aa20.41■□□□□ 0.86
PHF12-217ENST00000589176 ADAMTS12P58397 1594 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms